Ribosomal protein L5 - Revision history

Michal Harel at 08:24, 27 February 2022

Michal Harel — Sun, 27 Feb 2022 08:24:48 GMT

←Older revision		Revision as of 08:24, 27 February 2022
Line 18:		Line 18:
	**[[5aff]] – RPL5 + RPL11 + symportin – ''Chaetomium thermophilum''<br />		**[[5aff]] – RPL5 + RPL11 + symportin – ''Chaetomium thermophilum''<br />
	**[[1mji]] – RPL5 + 5S RRNA – ''Thermus thermophilus''<br />		**[[1mji]] – RPL5 + 5S RRNA – ''Thermus thermophilus''<br />
		+	**[[5ns3]], [[5ns4]] – TtRPL5 + RNA <br />

	*Ribosomal protein L5 in part of 50S subunit		*Ribosomal protein L5 in part of 50S subunit

	**[[3iyx]], [[3iyy]] – EcRPL5+RPS13+RPL31 – – ''Escherichia coli'' - Cryo-EM<br />		**[[3iyx]], [[3iyy]] – EcRPL5+RPS13+RPL31 – – ''Escherichia coli'' - Cryo-EM<br />
-	**[[1mji]] – TtRPL5+5S RRNA - ''Thermus thermophilus''<br />
	**[[3j5s]] – EcRPL5+RPL1+RPL33+RPS7+16S RRNA + 23S RRNA + p-site tRNA + ETTA - Cryo-EM<br />		**[[3j5s]] – EcRPL5+RPL1+RPL33+RPS7+16S RRNA + 23S RRNA + p-site tRNA + ETTA - Cryo-EM<br />
	}}		}}

Michal Harel at 10:01, 25 October 2017

Michal Harel — Wed, 25 Oct 2017 10:01:44 GMT

←Older revision		Revision as of 10:01, 25 October 2017
Line 1:		Line 1:
-	<StructureSection load='1mji' size='350' side='right' caption='~~Ribosomal~~ protein L5 complex with 5S RNA from Thermus thermophilus, (PDB code [[1mji]])' scene=''>	+	<StructureSection load='1mji' size='350' side='right' caption='Se-Met ribosomal protein L5 complex with 5S RNA from Thermus thermophilus, Mg+2 (green) and K+ (purple) ions (PDB code [[1mji]])' scene=''>

	== Function ==		== Function ==

Joel L. Sussman at 09:34, 29 September 2017

Joel L. Sussman — Fri, 29 Sep 2017 09:34:53 GMT

←Older revision		Revision as of 09:34, 29 September 2017
Line 3:		Line 3:
	== Function ==		== Function ==
	[[Ribosomal protein L5]] (RPL5) is one of the 34 proteins which belong to the <scene name='Ribosomal_protein_L5/Cv/2'>large 50S subunit</scene> of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. It is known to bind to the 5S RRNA from the large subunit. In the archaea like in ''Haloarcula marismortui'', the L5 is called L5P (RPL5P). The 3D structure of the		[[Ribosomal protein L5]] (RPL5) is one of the 34 proteins which belong to the <scene name='Ribosomal_protein_L5/Cv/2'>large 50S subunit</scene> of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. It is known to bind to the 5S RRNA from the large subunit. In the archaea like in ''Haloarcula marismortui'', the L5 is called L5P (RPL5P). The 3D structure of the
-	Ribosomal protein L5 complex with 5S RNA from Thermus thermophilus, (PDB code [[1mji]]) is shown to the right.	+	Ribosomal protein L5 complex with 5S RNA from Thermus thermophilus, (PDB code [[1mji]]) is shown to the right<ref>PMID:12515387</ref>.
	== Relevance ==		== Relevance ==
	Mutations in RPL5 are associated with cleft palate and abnormal thumbs in Diamond-Blackfan anemia patients<ref>PMID:19061985</ref>.		Mutations in RPL5 are associated with cleft palate and abnormal thumbs in Diamond-Blackfan anemia patients<ref>PMID:19061985</ref>.

Joel L. Sussman at 09:30, 29 September 2017

Joel L. Sussman — Fri, 29 Sep 2017 09:30:57 GMT

←Older revision		Revision as of 09:30, 29 September 2017
Line 2:		Line 2:

	== Function ==		== Function ==
-	[[Ribosomal protein L5]] (RPL5) is one of the 34 proteins which belong to the <scene name='Ribosomal_protein_L5/Cv/2'>large 50S subunit</scene> of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. It is known to bind to the 5S RRNA from the large subunit. In the archaea like in ''Haloarcula marismortui'', the L5 is called L5P (RPL5P).	+	[[Ribosomal protein L5]] (RPL5) is one of the 34 proteins which belong to the <scene name='Ribosomal_protein_L5/Cv/2'>large 50S subunit</scene> of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. It is known to bind to the 5S RRNA from the large subunit. In the archaea like in ''Haloarcula marismortui'', the L5 is called L5P (RPL5P). The 3D structure of the
-		+	Ribosomal protein L5 complex with 5S RNA from Thermus thermophilus, (PDB code [[1mji]]) is shown to the right.
	== Relevance ==		== Relevance ==
	Mutations in RPL5 are associated with cleft palate and abnormal thumbs in Diamond-Blackfan anemia patients<ref>PMID:19061985</ref>.		Mutations in RPL5 are associated with cleft palate and abnormal thumbs in Diamond-Blackfan anemia patients<ref>PMID:19061985</ref>.

Joel L. Sussman at 09:29, 29 September 2017

Joel L. Sussman — Fri, 29 Sep 2017 09:29:25 GMT

←Older revision		Revision as of 09:29, 29 September 2017
Line 1:		Line 1:
-	<StructureSection load='1mji' size='350' side='right' caption='Ribosomal protein L5 from Thermus thermophilus, (PDB code [[1mji])' scene=''>	+	<StructureSection load='1mji' size='350' side='right' caption='Ribosomal protein L5 complex with 5S RNA from Thermus thermophilus, (PDB code [[1mji]])' scene=''>

	== Function ==		== Function ==

Joel L. Sussman at 09:26, 29 September 2017

Joel L. Sussman — Fri, 29 Sep 2017 09:26:01 GMT

←Older revision		Revision as of 09:26, 29 September 2017
Line 1:		Line 1:
-	<StructureSection load='' size='350' side='right' caption='Ribosomal protein L5 from Thermus thermophilus, (PDB code [[~~2xg0~~]~~, chain G~~)' scene='~~Ribosomal_protein_L5/Cv/1~~'>	+	<StructureSection load='1mji' size='350' side='right' caption='Ribosomal protein L5 from Thermus thermophilus, (PDB code [[1mji])' scene=''>

	== Function ==		== Function ==

Joel L. Sussman at 09:11, 29 September 2017

Joel L. Sussman — Fri, 29 Sep 2017 09:11:18 GMT

←Older revision		Revision as of 09:11, 29 September 2017
Line 1:		Line 1:
-	~~{{STRUCTURE_2xg0\| PDB~~=~~2xg0 \| SIZE~~=~~400\| SCENE~~=~~Ribosomal_protein_L5/Cv/1 \|~~right~~\|CAPTION~~=Ribosomal protein L5 from ''Thermus thermophilus'' [[2xg0]], chain G }}	+	<StructureSection load='' size='350' side='right' caption='Ribosomal protein L5 from Thermus thermophilus, (PDB code [[2xg0], chain G)' scene='Ribosomal_protein_L5/Cv/1'>
		+
	== Function ==		== Function ==
	[[Ribosomal protein L5]] (RPL5) is one of the 34 proteins which belong to the <scene name='Ribosomal_protein_L5/Cv/2'>large 50S subunit</scene> of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. It is known to bind to the 5S RRNA from the large subunit. In the archaea like in ''Haloarcula marismortui'', the L5 is called L5P (RPL5P).		[[Ribosomal protein L5]] (RPL5) is one of the 34 proteins which belong to the <scene name='Ribosomal_protein_L5/Cv/2'>large 50S subunit</scene> of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. It is known to bind to the 5S RRNA from the large subunit. In the archaea like in ''Haloarcula marismortui'', the L5 is called L5P (RPL5P).
Line 6:		Line 7:
	Mutations in RPL5 are associated with cleft palate and abnormal thumbs in Diamond-Blackfan anemia patients<ref>PMID:19061985</ref>.		Mutations in RPL5 are associated with cleft palate and abnormal thumbs in Diamond-Blackfan anemia patients<ref>PMID:19061985</ref>.

		+	</StructureSection>
	== 3D Structures of Ribosomal protein L5 ==		== 3D Structures of Ribosomal protein L5 ==

Michal Harel at 17:38, 28 September 2017

Michal Harel — Thu, 28 Sep 2017 17:38:10 GMT

←Older revision		Revision as of 17:38, 28 September 2017
Line 14:		Line 14:

	**[[1iq4]] – RPL5 – ''Geobacillus stearothermophilus''<br />		**[[1iq4]] – RPL5 – ''Geobacillus stearothermophilus''<br />
-	[[5aff]] – RPL5 + RPL11 + symportin – ''Chaetomium thermophilum''<br />	+	**[[5aff]] – RPL5 + RPL11 + symportin – ''Chaetomium thermophilum''<br />
		+	**[[1mji]] – RPL5 + 5S RRNA – ''Thermus thermophilus''<br />

	*Ribosomal protein L5 in part of 50S subunit		*Ribosomal protein L5 in part of 50S subunit

Michal Harel at 08:26, 14 August 2016

Michal Harel — Sun, 14 Aug 2016 08:26:27 GMT

←Older revision		Revision as of 08:26, 14 August 2016
Line 4:		Line 4:

	== Relevance ==		== Relevance ==
-	Mutations in RPL5 are associated with cleft palate and abnormal thumbs in Diamond-Blackfan anemia patients<ref>PMID:~~12651944~~</ref>.	+	Mutations in RPL5 are associated with cleft palate and abnormal thumbs in Diamond-Blackfan anemia patients<ref>PMID:19061985</ref>.

	== 3D Structures of Ribosomal protein L5 ==		== 3D Structures of Ribosomal protein L5 ==

Michal Harel at 06:58, 14 August 2016

Michal Harel — Sun, 14 Aug 2016 06:58:56 GMT

←Older revision		Revision as of 06:58, 14 August 2016
Line 1:		Line 1:
	{{STRUCTURE_2xg0\| PDB=2xg0 \| SIZE=400\| SCENE=Ribosomal_protein_L5/Cv/1 \|right\|CAPTION=Ribosomal protein L5 from ''Thermus thermophilus'' [[2xg0]], chain G }}		{{STRUCTURE_2xg0\| PDB=2xg0 \| SIZE=400\| SCENE=Ribosomal_protein_L5/Cv/1 \|right\|CAPTION=Ribosomal protein L5 from ''Thermus thermophilus'' [[2xg0]], chain G }}
	== Function ==		== Function ==
-	[[Ribosomal protein L5]] (RPL5) is one of the 34 proteins which belong to the <scene name='Ribosomal_protein_L5/Cv/2'>large 50S subunit</scene> of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. It is known to bind to the 5S RRNA from the large subunit~~<ref>PMID:19061985</ref>~~. In the archaea like in ''Haloarcula marismortui'', the L5 is called L5P (RPL5P).	+	[[Ribosomal protein L5]] (RPL5) is one of the 34 proteins which belong to the <scene name='Ribosomal_protein_L5/Cv/2'>large 50S subunit</scene> of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. It is known to bind to the 5S RRNA from the large subunit. In the archaea like in ''Haloarcula marismortui'', the L5 is called L5P (RPL5P).

	== Relevance ==		== Relevance ==