Ribosomal protein L9 - Revision history

Joel L. Sussman at 08:19, 29 September 2017

Joel L. Sussman — Fri, 29 Sep 2017 08:19:45 GMT

←Older revision		Revision as of 08:19, 29 September 2017
Line 1:		Line 1:
-	~~{{STRUCTURE_1div\| PDB~~=~~1div \| SIZE~~=~~300\| SCENE~~=~~Ribosomal_protein_L9/Cv/1 \|~~right~~\|CAPTION~~=Ribosomal protein L9 [[1div]] }}	+	<StructureSection load='' size='350' side='right' caption='Ribosomal protein L9, (PDB code [[1div]])' scene='Ribosomal_protein_L9/Cv/1'>

	[[Ribosomal protein L9]] (RPL9) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome<ref>PMID:8780779</ref>.		[[Ribosomal protein L9]] (RPL9) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome<ref>PMID:8780779</ref>.

		+	</StructureSection>
	== 3D Structures of Ribosomal protein L9 ==		== 3D Structures of Ribosomal protein L9 ==

Michal Harel at 17:45, 28 September 2017

Michal Harel — Thu, 28 Sep 2017 17:45:51 GMT

←Older revision		Revision as of 17:45, 28 September 2017
Line 18:		Line 18:


-	*Ribosomal protein L7 in part of 50S subunit	+	*Ribosomal protein L9 in part of 50S subunit

	**[[487d]] – RPL9+RPL1+RPL2+RPL6+RPL11+RPL14+RPL25 – Cryo-EM		**[[487d]] – RPL9+RPL1+RPL2+RPL6+RPL11+RPL14+RPL25 – Cryo-EM

Michal Harel at 08:08, 14 August 2016

Michal Harel — Sun, 14 Aug 2016 08:08:03 GMT

←Older revision		Revision as of 08:08, 14 August 2016
Line 1:		Line 1:
	{{STRUCTURE_1div\| PDB=1div \| SIZE=300\| SCENE=Ribosomal_protein_L9/Cv/1 \|right\|CAPTION=Ribosomal protein L9 [[1div]] }}		{{STRUCTURE_1div\| PDB=1div \| SIZE=300\| SCENE=Ribosomal_protein_L9/Cv/1 \|right\|CAPTION=Ribosomal protein L9 [[1div]] }}

-	[[Ribosomal protein L9]] (RPL9) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome.	+	[[Ribosomal protein L9]] (RPL9) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome<ref>PMID:8780779</ref>.

	== 3D Structures of Ribosomal protein L9 ==		== 3D Structures of Ribosomal protein L9 ==
Line 22:		Line 22:
	**[[487d]] – RPL9+RPL1+RPL2+RPL6+RPL11+RPL14+RPL25 – Cryo-EM		**[[487d]] – RPL9+RPL1+RPL2+RPL6+RPL11+RPL14+RPL25 – Cryo-EM
	}}		}}
		+	== References ==
		+	<references/>
	[[Category:Topic Page]]		[[Category:Topic Page]]

Michal Harel at 10:57, 9 December 2014

Michal Harel — Tue, 09 Dec 2014 10:57:07 GMT

←Older revision		Revision as of 10:57, 9 December 2014
Line 1:		Line 1:
-
	{{STRUCTURE_1div\| PDB=1div \| SIZE=300\| SCENE=Ribosomal_protein_L9/Cv/1 \|right\|CAPTION=Ribosomal protein L9 [[1div]] }}		{{STRUCTURE_1div\| PDB=1div \| SIZE=300\| SCENE=Ribosomal_protein_L9/Cv/1 \|right\|CAPTION=Ribosomal protein L9 [[1div]] }}

	[[Ribosomal protein L9]] (RPL9) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome.		[[Ribosomal protein L9]] (RPL9) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome.

-	~~{{TOC limit\|limit~~=~~2}}~~	+	== 3D Structures of Ribosomal protein L9 ==

-	== 3D Structures of Ribosomal protein L9 ==
-	<br />
-	<br />
-	<br />
-	<br />
-	<br />

	Updated on {{REVISIONDAY2}}-{{MONTHNAME\|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}		Updated on {{REVISIONDAY2}}-{{MONTHNAME\|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}

Michal Harel at 08:50, 9 December 2014

Michal Harel — Tue, 09 Dec 2014 08:50:23 GMT

←Older revision		Revision as of 08:50, 9 December 2014
Line 1:		Line 1:
-	~~[[Image:1div.png\|left\|200px\|thumb\|Crystal Structure of Ribosomal protein L9 ([[1div]])]]~~	+
	{{STRUCTURE_1div\| PDB=1div \| SIZE=300\| SCENE=Ribosomal_protein_L9/Cv/1 \|right\|CAPTION=Ribosomal protein L9 [[1div]] }}		{{STRUCTURE_1div\| PDB=1div \| SIZE=300\| SCENE=Ribosomal_protein_L9/Cv/1 \|right\|CAPTION=Ribosomal protein L9 [[1div]] }}

-	[[Ribosomal protein L9]] (RPL9) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome~~. The images at the left and at the right correspond to one representative RPL9, ''i.e.'' the crystal structure of Ribosomal protein L9 from ''Bacillus stearothermophilus'' ([[1div]])~~.	+	[[Ribosomal protein L9]] (RPL9) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome.

	{{TOC limit\|limit=2}}		{{TOC limit\|limit=2}}
Line 14:		Line 14:

	Updated on {{REVISIONDAY2}}-{{MONTHNAME\|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}		Updated on {{REVISIONDAY2}}-{{MONTHNAME\|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
		+	{{#tree:id=OrganizedByTopic\|openlevels=0\|

-	~~=== RPL9 ===~~	+	*Ribosomal protein L9
-		+
-	~~[[1div]] – GsRPL9 – ''Geobacillus stearothermophilus''<br />~~	+
-	~~[[2hvf]], [[2hba]] – GsRPL9 N-terminal (mutant)<br />~~	+
-	~~[[2hbb]] - GsRPL9 N-terminal<br />~~	+
-	~~[[1cqu]] - GsRPL9 N-terminal - NMR<br />~~	+
-	~~[[2cql]] - hRPL9 N-terminal - human <br />~~	+

		+	**[[1div]] – GsRPL9 – ''Geobacillus stearothermophilus''<br />
		+	**[[2hvf]], [[2hba]] – GsRPL9 N-terminal (mutant)<br />
		+	**[[2hbb]] - GsRPL9 N-terminal<br />
		+	**[[1cqu]] - GsRPL9 N-terminal - NMR<br />
		+	**[[2cql]] - hRPL9 N-terminal - human <br />

-	===L9 in part of 50S subunit===

-	~~[[487d]] – RPL9+RPL1+RPL2+RPL6+RPL11+RPL14+RPL25 – Cryo-EM~~	+	*Ribosomal protein L7 in part of 50S subunit

		+	**[[487d]] – RPL9+RPL1+RPL2+RPL6+RPL11+RPL14+RPL25 – Cryo-EM
		+	}}
	[[Category:Topic Page]]		[[Category:Topic Page]]

Michal Harel at 08:00, 24 April 2014

Michal Harel — Thu, 24 Apr 2014 08:00:49 GMT

←Older revision		Revision as of 08:00, 24 April 2014
Line 23:		Line 23:
	[[2cql]] - hRPL9 N-terminal - human <br />		[[2cql]] - hRPL9 N-terminal - human <br />

-	=== L9 in 50S subunit+RNA ===
-
-	[[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]] – TtRPL10 in 50S subunit+RNA fragments - ''Thermus thermophilus''<br />
-	[[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47]], [[2v49]], [[1vsa]], [[2hgj]], [[2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[3tve]], [[3tvh]], [[3uye]], [[3uyg]], [[3uz1]], [[3uz2]], [[3uz8]], [[3uz9]], [[3uzf]], [[3uzh]], [[3uzk]], [[3uzn]], [[4dha]], [[4dhc]], [[3v23]], [[3v25]], [[3v27]], [[3v29]], [[3v2d]], [[3v2f]], [[3v6w]], [[3v6x]], [[3zn9]], [[3zne]], [[4ejb]], [[4ejc]], [[4g5l]], [[4g5n]], [[4g5u]], [[4g5w]], [[4k0m]], [[4k0q]], [[4kfi]], [[4kfl]] - TtRPL10 in 50S subunit+5S RRNA+23S RRNA<br />
-	[[3fin]] - TtRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />
-	[[2wwq]] – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<br />
-	[[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3ofd]], [[3og0]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]], [[3r8s]], [[3r8t]], [[3uxq]], [[3uxr]], [[4gar]], [[4gau]], [[3j37]], [[4kix]], [[4kiz]], [[4kj1]], [[4kj3]], [[4kj5]], [[4kj7]], [[4kj9]], [[4kjb]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA<br />
-	[[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]], [[3izt]], [[3izu]], [[3j0t]], [[3j0w]], [[3j0y]], [[3j11]], [[3j12]], [[3j14]], [[3j19]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />
-	[[3kcr]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase<br />
-	[[3j01]] – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase – Cryo-EM<br />
-	[[2rdo]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM<br />
-	[[3bbo]] - RPL9 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach<br />
-	[[3iy9]] – RPL9 in 50S subunit – ''Leishmania taretolae''<br />
-	[[1nkw]] - DrRPL9 in 50S subunit+5S RRNA+23S RRNA - ''Deinococcus radiodurans''
-
-	=== L9 in 50S subunit + antibiotics ===
-
-	[[1xbp]], [[1nwx]], [[1nwy]], [[1sm1]] - DrRPL9 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />
-	[[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]] – TtRPL9 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />
-	[[2qam]], [[2qao]], [[2qoz]], [[2qp1]], [[2qba]], [[2qbc]], [[3ofc]], [[3ofz]], [[3ofq]], [[3ofr]], [[1vt2]], [[3orb]], [[3oas]], [[3oat]], [[4l6j]], [[4l6l]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />
-
-	=== L9 in 60S subunit ===
-
-	[[3jyw]] - RPL9 in 60S subunit – ''Thermomyces lanuginosus'' – Cryo-EM<br />
-	[[3j39]] – RPL9 in 60S subunit – ''Drosophila melanogaster'' – Cryo-EM<br />
-	[[3j3b]] – RPL9 in 60S subunit – human – Cryo-EM<br />
-	[[1s1i]] - yRPL9 in 40S ribosomal subunit+18S RRNA+elongation factor 2 – Cryo-EM – yeast<br />
-	[[3o58]], [[3o5h]] - yRPL9 in 60S ribosomal subunit+25S RRNA+5S RRNA+5.8S RRNA<br />
-	[[3izs]] – yRPL9 in 60S ribosomal subunit – Cryo-EM<br />
-	[[3u5e]], [[3u5i]] – yRPL9 in 60S ribosomal subunit<br />
-	[[3izr]] – RPL9 in 60S subunit – wheat – Cryo EM<br />
-	[[4b6a]] – yRPL9 in 60S ribosomal subunit + P0 + P1 + P2 + ARX1 – Cryo-EM<br />
-
-	=== L9 in large + small ribosomal subunit ===
-
-	[[2zkr]] - RPL9 in 60S ribosomal subunit+30S ribosomal subunit+28S RRNA+5.8S RRNA – Cryo-EM – dog
-
-	===L9 in 50S subunit + ribosome releasing factor (RRF)===
-
-	[[2qbe]], [[2qbg]], [[2qbi]], [[2qbk]], [[2z4l]], [[2z4n]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+RRF
-
-	===L9 in 50S subunit + various proteins===
-
-	[[2vhm]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix<br />
-	[[2j28]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<br />

	===L9 in part of 50S subunit===		===L9 in part of 50S subunit===

Michal Harel at 09:53, 15 October 2013

Michal Harel — Tue, 15 Oct 2013 09:53:36 GMT

Michal Harel at 12:16, 6 March 2013

Michal Harel — Wed, 06 Mar 2013 12:16:07 GMT

←Older revision		Revision as of 12:16, 6 March 2013
Line 53:		Line 53:
	[[3izr]] – RPL9 in 60S subunit – wheat – Cryo EM<br />		[[3izr]] – RPL9 in 60S subunit – wheat – Cryo EM<br />
	[[4b6a]] – yRPL9 in 60S ribosomal subunit + P0 + P1 + P2 + ARX1 – Cryo-EM<br />		[[4b6a]] – yRPL9 in 60S ribosomal subunit + P0 + P1 + P2 + ARX1 – Cryo-EM<br />
-	[[3j16]] – yRPL9 + yRPL11 + yRPS6 + yRPS24 + yRPS30+18S RRNA + 28S RRNA + P-site tRNA + RLI1P + DOM34P – Cryo-EM

	=== L9 in large + small ribosomal subunit ===		=== L9 in large + small ribosomal subunit ===

Michal Harel at 12:07, 6 March 2013

Michal Harel — Wed, 06 Mar 2013 12:07:56 GMT

←Older revision		Revision as of 12:07, 6 March 2013
Line 13:		Line 13:
	<br />		<br />

-	~~''Update June 2012''~~	+	Updated on {{REVISIONDAY2}}-{{MONTHNAME\|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}

	=== RPL9 ===		=== RPL9 ===
Line 26:		Line 26:

	[[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]] – TtRPL10 in 50S subunit+RNA fragments - ''Thermus thermophilus''<br />		[[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]] – TtRPL10 in 50S subunit+RNA fragments - ''Thermus thermophilus''<br />
-	[[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47]], [[2v49]], [[1vsa]], [[2hgj]], [[2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[3tve]], [[3tvh]], [[3uye]], [[3uyg]], [[3uz1]], [[3uz2]], [[3uz8]], [[3uz9]], [[3uzf]], [[3uzh]], [[3uzk]], [[3uzn]], [[4dha]], [[4dhc]] - TtRPL10 in 50S subunit+5S RRNA+23S RRNA<br />	+	[[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47]], [[2v49]], [[1vsa]], [[2hgj]], [[2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[3tve]], [[3tvh]], [[3uye]], [[3uyg]], [[3uz1]], [[3uz2]], [[3uz8]], [[3uz9]], [[3uzf]], [[3uzh]], [[3uzk]], [[3uzn]], [[4dha]], [[4dhc]], [[3v23]], [[3v25]], [[3v27]], [[3v29]], [[3v2d]], [[3v2f]] - TtRPL10 in 50S subunit+5S RRNA+23S RRNA<br />
	[[3fin]] - TtRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />		[[3fin]] - TtRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />
	[[2wwq]] – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<br />		[[2wwq]] – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<br />
-	[[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3ofd]], [[3og0]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]], [[3r8s]], [[3r8t]], [[3uxq]], [[3uxr]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA<br />	+	[[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3ofd]], [[3og0]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]], [[3r8s]], [[3r8t]], [[3uxq]], [[3uxr]], [[4gar]], [[4gau]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA<br />
	[[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]], [[3izt]], [[3izu]], [[3j0t]], [[3j0w]], [[3j0y]], [[3j11]], [[3j12]], [[3j14]], [[3j19]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />		[[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]], [[3izt]], [[3izu]], [[3j0t]], [[3j0w]], [[3j0y]], [[3j11]], [[3j12]], [[3j14]], [[3j19]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />
	[[3kcr]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase<br />		[[3kcr]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase<br />
Line 52:		Line 52:
	[[3u5e]], [[3u5i]] – yRPL9 in 60S ribosomal subunit<br />		[[3u5e]], [[3u5i]] – yRPL9 in 60S ribosomal subunit<br />
	[[3izr]] – RPL9 in 60S subunit – wheat – Cryo EM<br />		[[3izr]] – RPL9 in 60S subunit – wheat – Cryo EM<br />
		+	[[4b6a]] – yRPL9 in 60S ribosomal subunit + P0 + P1 + P2 + ARX1 – Cryo-EM<br />
		+	[[3j16]] – yRPL9 + yRPL11 + yRPS6 + yRPS24 + yRPS30+18S RRNA + 28S RRNA + P-site tRNA + RLI1P + DOM34P – Cryo-EM

	=== L9 in large + small ribosomal subunit ===		=== L9 in large + small ribosomal subunit ===

Michal Harel at 10:52, 27 June 2012

Michal Harel — Wed, 27 Jun 2012 10:52:41 GMT

←Older revision		Revision as of 09:53, 15 October 2013
Line 26:		Line 26:

	[[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]] – TtRPL10 in 50S subunit+RNA fragments - ''Thermus thermophilus''<br />		[[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]] – TtRPL10 in 50S subunit+RNA fragments - ''Thermus thermophilus''<br />
-	[[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47]], [[2v49]], [[1vsa]], [[2hgj]], [[2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[3tve]], [[3tvh]], [[3uye]], [[3uyg]], [[3uz1]], [[3uz2]], [[3uz8]], [[3uz9]], [[3uzf]], [[3uzh]], [[3uzk]], [[3uzn]], [[4dha]], [[4dhc]], [[3v23]], [[3v25]], [[3v27]], [[3v29]], [[3v2d]], [[3v2f]] - TtRPL10 in 50S subunit+5S RRNA+23S RRNA<br />	+	[[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47]], [[2v49]], [[1vsa]], [[2hgj]], [[2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[3tve]], [[3tvh]], [[3uye]], [[3uyg]], [[3uz1]], [[3uz2]], [[3uz8]], [[3uz9]], [[3uzf]], [[3uzh]], [[3uzk]], [[3uzn]], [[4dha]], [[4dhc]], [[3v23]], [[3v25]], [[3v27]], [[3v29]], [[3v2d]], [[3v2f]], [[3v6w]], [[3v6x]], [[3zn9]], [[3zne]], [[4ejb]], [[4ejc]], [[4g5l]], [[4g5n]], [[4g5u]], [[4g5w]], [[4k0m]], [[4k0q]], [[4kfi]], [[4kfl]] - TtRPL10 in 50S subunit+5S RRNA+23S RRNA<br />
	[[3fin]] - TtRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />		[[3fin]] - TtRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />
	[[2wwq]] – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<br />		[[2wwq]] – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<br />
-	[[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3ofd]], [[3og0]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]], [[3r8s]], [[3r8t]], [[3uxq]], [[3uxr]], [[4gar]], [[4gau]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA<br />	+	[[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3ofd]], [[3og0]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]], [[3r8s]], [[3r8t]], [[3uxq]], [[3uxr]], [[4gar]], [[4gau]], [[3j37]], [[4kix]], [[4kiz]], [[4kj1]], [[4kj3]], [[4kj5]], [[4kj7]], [[4kj9]], [[4kjb]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA<br />
	[[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]], [[3izt]], [[3izu]], [[3j0t]], [[3j0w]], [[3j0y]], [[3j11]], [[3j12]], [[3j14]], [[3j19]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />		[[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]], [[3izt]], [[3izu]], [[3j0t]], [[3j0w]], [[3j0y]], [[3j11]], [[3j12]], [[3j14]], [[3j19]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />
	[[3kcr]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase<br />		[[3kcr]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase<br />
Line 42:		Line 42:
	[[1xbp]], [[1nwx]], [[1nwy]], [[1sm1]] - DrRPL9 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />		[[1xbp]], [[1nwx]], [[1nwy]], [[1sm1]] - DrRPL9 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />
	[[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]] – TtRPL9 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />		[[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]] – TtRPL9 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />
-	[[2qam]], [[2qao]], [[2qoz]], [[2qp1]], [[2qba]], [[2qbc]], [[3ofc]], [[3ofz]], [[3ofq]], [[3ofr]], [[1vt2]], [[3orb]], [[3oas]], [[3oat]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />	+	[[2qam]], [[2qao]], [[2qoz]], [[2qp1]], [[2qba]], [[2qbc]], [[3ofc]], [[3ofz]], [[3ofq]], [[3ofr]], [[1vt2]], [[3orb]], [[3oas]], [[3oat]], [[4l6j]], [[4l6l]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />

	=== L9 in 60S subunit ===		=== L9 in 60S subunit ===

	[[3jyw]] - RPL9 in 60S subunit – ''Thermomyces lanuginosus'' – Cryo-EM<br />		[[3jyw]] - RPL9 in 60S subunit – ''Thermomyces lanuginosus'' – Cryo-EM<br />
		+	[[3j39]] – RPL9 in 60S subunit – ''Drosophila melanogaster'' – Cryo-EM<br />
		+	[[3j3b]] – RPL9 in 60S subunit – human – Cryo-EM<br />
	[[1s1i]] - yRPL9 in 40S ribosomal subunit+18S RRNA+elongation factor 2 – Cryo-EM – yeast<br />		[[1s1i]] - yRPL9 in 40S ribosomal subunit+18S RRNA+elongation factor 2 – Cryo-EM – yeast<br />
	[[3o58]], [[3o5h]] - yRPL9 in 60S ribosomal subunit+25S RRNA+5S RRNA+5.8S RRNA<br />		[[3o58]], [[3o5h]] - yRPL9 in 60S ribosomal subunit+25S RRNA+5S RRNA+5.8S RRNA<br />

←Older revision		Revision as of 10:52, 27 June 2012
Line 13:		Line 13:
	<br />		<br />

-	''Update June ~~2011~~''	+	''Update June 2012''

	=== RPL9 ===		=== RPL9 ===
Line 26:		Line 26:

	[[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]] – TtRPL10 in 50S subunit+RNA fragments - ''Thermus thermophilus''<br />		[[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]] – TtRPL10 in 50S subunit+RNA fragments - ''Thermus thermophilus''<br />
-	[[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47]], [[2v49]], [[1vsa]], [[2hgj]], [[2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]] - TtRPL10 in 50S subunit+5S RRNA+23S RRNA<br />	+	[[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47]], [[2v49]], [[1vsa]], [[2hgj]], [[2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[3tve]], [[3tvh]], [[3uye]], [[3uyg]], [[3uz1]], [[3uz2]], [[3uz8]], [[3uz9]], [[3uzf]], [[3uzh]], [[3uzk]], [[3uzn]], [[4dha]], [[4dhc]] - TtRPL10 in 50S subunit+5S RRNA+23S RRNA<br />
	[[3fin]] - TtRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />		[[3fin]] - TtRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />
	[[2wwq]] – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<br />		[[2wwq]] – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<br />
-	[[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3ofd]], [[3og0]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]], [[3r8s]], [[3r8t]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA<br />	+	[[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3ofd]], [[3og0]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]], [[3r8s]], [[3r8t]], [[3uxq]], [[3uxr]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA<br />
-	[[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]], [[3izt]], [[3izu]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />	+	[[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]], [[3izt]], [[3izu]], [[3j0t]], [[3j0w]], [[3j0y]], [[3j11]], [[3j12]], [[3j14]], [[3j19]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />
	[[3kcr]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase<br />		[[3kcr]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase<br />
	[[3j01]] – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase – Cryo-EM<br />		[[3j01]] – EcRPL9 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase – Cryo-EM<br />
Line 37:		Line 37:
	[[3iy9]] – RPL9 in 50S subunit – ''Leishmania taretolae''<br />		[[3iy9]] – RPL9 in 50S subunit – ''Leishmania taretolae''<br />
	[[1nkw]] - DrRPL9 in 50S subunit+5S RRNA+23S RRNA - ''Deinococcus radiodurans''		[[1nkw]] - DrRPL9 in 50S subunit+5S RRNA+23S RRNA - ''Deinococcus radiodurans''
-

	=== L9 in 50S subunit + antibiotics ===		=== L9 in 50S subunit + antibiotics ===
Line 44:		Line 43:
	[[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]] – TtRPL9 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />		[[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]] – TtRPL9 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />
	[[2qam]], [[2qao]], [[2qoz]], [[2qp1]], [[2qba]], [[2qbc]], [[3ofc]], [[3ofz]], [[3ofq]], [[3ofr]], [[1vt2]], [[3orb]], [[3oas]], [[3oat]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />		[[2qam]], [[2qao]], [[2qoz]], [[2qp1]], [[2qba]], [[2qbc]], [[3ofc]], [[3ofz]], [[3ofq]], [[3ofr]], [[1vt2]], [[3orb]], [[3oas]], [[3oat]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />
-

	=== L9 in 60S subunit ===		=== L9 in 60S subunit ===

-	[[3jyw]] - ~~RPL10~~ in 60S subunit – ''Thermomyces lanuginosus'' – Cryo-EM<br />	+	[[3jyw]] - RPL9 in 60S subunit – ''Thermomyces lanuginosus'' – Cryo-EM<br />
-	[[1s1i]] - ~~yRPL10~~ in 40S ribosomal subunit+18S RRNA+elongation factor 2 – Cryo-EM – yeast<br />	+	[[1s1i]] - yRPL9 in 40S ribosomal subunit+18S RRNA+elongation factor 2 – Cryo-EM – yeast<br />
-	[[3o58]], [[3o5h]] - ~~yRPL8~~ in 60S ribosomal subunit+25S RRNA+5S RRNA+5.8S RRNA<br />	+	[[3o58]], [[3o5h]] - yRPL9 in 60S ribosomal subunit+25S RRNA+5S RRNA+5.8S RRNA<br />
		+	[[3izs]] – yRPL9 in 60S ribosomal subunit – Cryo-EM<br />
		+	[[3u5e]], [[3u5i]] – yRPL9 in 60S ribosomal subunit<br />
	[[3izr]] – RPL9 in 60S subunit – wheat – Cryo EM<br />		[[3izr]] – RPL9 in 60S subunit – wheat – Cryo EM<br />
-

	=== L9 in large + small ribosomal subunit ===		=== L9 in large + small ribosomal subunit ===

-	[[2zkr]] - ~~RPL10~~ in 60S ribosomal subunit+30S ribosomal subunit+28S RRNA+5.8S RRNA – Cryo-EM – dog	+	[[2zkr]] - RPL9 in 60S ribosomal subunit+30S ribosomal subunit+28S RRNA+5.8S RRNA – Cryo-EM – dog
-		+

	===L9 in 50S subunit + ribosome releasing factor (RRF)===		===L9 in 50S subunit + ribosome releasing factor (RRF)===

	[[2qbe]], [[2qbg]], [[2qbi]], [[2qbk]], [[2z4l]], [[2z4n]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+RRF		[[2qbe]], [[2qbg]], [[2qbi]], [[2qbk]], [[2z4l]], [[2z4n]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+RRF
-

	===L9 in 50S subunit + various proteins===		===L9 in 50S subunit + various proteins===
Line 68:		Line 65:
	[[2vhm]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix<br />		[[2vhm]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix<br />
	[[2j28]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<br />		[[2j28]] - EcRPL9 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<br />
-

	===L9 in part of 50S subunit===		===L9 in part of 50S subunit===