SandboxGenetic322-1 - Revision history

David O'Brochta at 21:58, 12 January 2017

David O'Brochta — Thu, 12 Jan 2017 21:58:17 GMT

←Older revision		Revision as of 21:58, 12 January 2017
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	'''Maryia Svirydava'''		'''Maryia Svirydava'''

-	Adenylate kinase, also known as myokinase, is a phosphotransferase enzyme that catalyzes the interconversion of adenine nucleotides.It undergoes large conformational changes during its catalytic cycle.	+	Adenylate kinase, also known as myokinase, is a phosphotransferase enzyme that catalyzes the interconversion of adenine nucleotides.It undergoes large conformational changes during its catalytic cycle. It is known to bind to ligand at the following <scene name='75/750209/Adk_negative_residues_ms/1'>negative cleft residues</scene>.
	<Structure load='4AKE' size='350' frame='true' align='right' caption='structure of adenylate kinase' scene='Insert optional scene name here' />		<Structure load='4AKE' size='350' frame='true' align='right' caption='structure of adenylate kinase' scene='Insert optional scene name here' />
	----		----

David O'Brochta at 21:10, 12 January 2017

David O'Brochta — Thu, 12 Jan 2017 21:10:16 GMT

←Older revision		Revision as of 21:10, 12 January 2017
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-	~~<Structure load='3V6Z' size='350' frame='true' align='right' caption='crystal strucure of HBV e-antigen (HBeAg), a marker for hepatitis B disease severity' scene='Insert optional scene name here' />~~'''Maryia Svirydava'''	+	'''Maryia Svirydava'''

-	~~Hepatitis B virus e-antigen (HBeAg)~~ is a ~~variant of the protein~~ that ~~forms~~ the ~~building block~~ of ~~capsids~~. It ~~is implicated in establishing immune tolerance and chronic infection~~.	+	Adenylate kinase, also known as myokinase, is a phosphotransferase enzyme that catalyzes the interconversion of adenine nucleotides.It undergoes large conformational changes during its catalytic cycle.
		+	<Structure load='4AKE' size='350' frame='true' align='right' caption='structure of adenylate kinase' scene='Insert optional scene name here' />
	----		----

David O'Brochta at 20:50, 12 January 2017

David O'Brochta — Thu, 12 Jan 2017 20:50:47 GMT

←Older revision		Revision as of 20:50, 12 January 2017
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-	<Structure load='3V6Z' size='350' frame='true' align='right' caption='HBV e-antigen (HBeAg), a marker for hepatitis B disease severity' scene='Insert optional scene name here' />'''Maryia Svirydava'''	+	<Structure load='3V6Z' size='350' frame='true' align='right' caption='crystal strucure of HBV e-antigen (HBeAg), a marker for hepatitis B disease severity' scene='Insert optional scene name here' />'''Maryia Svirydava'''

	Hepatitis B virus e-antigen (HBeAg) is a variant of the protein that forms the building block of capsids. It is implicated in establishing immune tolerance and chronic infection.		Hepatitis B virus e-antigen (HBeAg) is a variant of the protein that forms the building block of capsids. It is implicated in establishing immune tolerance and chronic infection.

David O'Brochta at 20:47, 12 January 2017

David O'Brochta — Thu, 12 Jan 2017 20:47:19 GMT

←Older revision		Revision as of 20:47, 12 January 2017
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-	'''Maryia Svirydava'''	+	<Structure load='3V6Z' size='350' frame='true' align='right' caption='HBV e-antigen (HBeAg), a marker for hepatitis B disease severity' scene='Insert optional scene name here' />'''Maryia Svirydava'''

		+	Hepatitis B virus e-antigen (HBeAg) is a variant of the protein that forms the building block of capsids. It is implicated in establishing immune tolerance and chronic infection.
	----		----

David O'Brochta at 17:41, 12 January 2017

David O'Brochta — Thu, 12 Jan 2017 17:41:55 GMT

←Older revision		Revision as of 17:41, 12 January 2017
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-	Maryia Svirydava	+	'''Maryia Svirydava'''
		+
		+	----
		+

	This is a Sandbox page that you can use for creating our discussion project.		This is a Sandbox page that you can use for creating our discussion project.

David O'Brochta at 17:37, 12 January 2017

David O'Brochta — Thu, 12 Jan 2017 17:37:49 GMT

←Older revision		Revision as of 17:37, 12 January 2017
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	Maryia Svirydava		Maryia Svirydava
		+
	This is a Sandbox page that you can use for creating our discussion project.		This is a Sandbox page that you can use for creating our discussion project.

David O'Brochta at 17:37, 12 January 2017

David O'Brochta — Thu, 12 Jan 2017 17:37:29 GMT

←Older revision		Revision as of 17:37, 12 January 2017
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		+	Maryia Svirydava
	This is a Sandbox page that you can use for creating our discussion project.		This is a Sandbox page that you can use for creating our discussion project.

David O'Brochta at 21:05, 4 January 2017

David O'Brochta — Wed, 04 Jan 2017 21:05:46 GMT

←Older revision		Revision as of 21:05, 4 January 2017
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	This is a Sandbox page that you can use for creating our discussion project.		This is a Sandbox page that you can use for creating our discussion project.

-	I would like for you to watch the short training videos. Each is short and you can view them all in about 40 mins. These provide the basic knowledge you will need to our discussion sections. I need you to get some basic familiarity with this package so you will be able to help students.	+	I would like for you to watch the short training videos. Each is short and you can view them all in about 40 mins. These provide the basic knowledge you will need to our discussion sections.
		+
		+	I need you to get some basic familiarity with this package so you will be able to help students.

	Our first three discussions will focus on 'structure'. Structure of DNA, proteins, and RNA.		Our first three discussions will focus on 'structure'. Structure of DNA, proteins, and RNA.

David O'Brochta: This is for my TAs to play in.

David O'Brochta — Wed, 04 Jan 2017 19:28:13 GMT

This is for my TAs to play in.

New page

This is a Sandbox page that you can use for creating our discussion project.

I would like for you to watch the short training videos. Each is short and you can view them all in about 40 mins. These provide the basic knowledge you will need to our discussion sections. I need you to get some basic familiarity with this package so you will be able to help students.

Our first three discussions will focus on 'structure'. Structure of DNA, proteins, and RNA.

The students will work in 2 person teams and will create a Proteopedia page on their assigned molecule and will be asked to research their molecule and create 'scenes' which are representations of the molecule that illustrates some key features.

There will be a work sheet the students will follow to help them through the project.

One of the objectives is to have the students manipulate structures to appreciate the 3 dimensional nature of the molecules we are discussing and to begin to help them conceptualize how these molecule might interact etc.