Template:STRUCTURE 1frn - Revision history

OCA at 10:00, 21 November 2012

OCA — Wed, 21 Nov 2012 10:00:28 GMT

←Older revision		Revision as of 10:00, 21 November 2012
Line 1:		Line 1:
	{{Structure		{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1frn]], resolution 2.00Å (<scene name='initialview01'>default scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1frn]], [[Resolution\|resolution]] 2.00Å (<scene name='initialview01'>default scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>		\|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span>
-	~~\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00175 NAD_binding_1], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0369 CysJ]</span>~~	+	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1frn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1frn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1frn RCSB], [http://www.ebi.ac.uk/pdbsum/1frn PDBsum]</span>
-	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1frn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1frn OCA], [http://www.~~ebi~~.~~ac.uk~~/~~pdbsum~~/1frn ~~PDBsum~~], [http://www.~~rcsb~~.~~org~~/~~pdb~~/~~explore.do?structureId=~~1frn ~~RCSB~~]</span>	+
	\|FUNCTION={{GO\|id=GO:0050661 \| text = NADP binding}}{{GO\|id=GO:0016491 \| text = oxidoreductase activity}}{{GO\|id=GO:0005515 \| text = protein binding}}{{GO\|id=GO:0004324 \| text = ferredoxin-NADP+ reductase activity}}{{GO\|id=GO:0050660 \| text = FAD binding}}		\|FUNCTION={{GO\|id=GO:0050661 \| text = NADP binding}}{{GO\|id=GO:0016491 \| text = oxidoreductase activity}}{{GO\|id=GO:0005515 \| text = protein binding}}{{GO\|id=GO:0004324 \| text = ferredoxin-NADP+ reductase activity}}{{GO\|id=GO:0050660 \| text = FAD binding}}
	\|PROCESS={{GO\|id=GO:0015979 \| text = photosynthesis}}{{GO\|id=GO:0006810 \| text = transport}}{{GO\|id=GO:0006118 \| text = electron transport}}		\|PROCESS={{GO\|id=GO:0015979 \| text = photosynthesis}}{{GO\|id=GO:0006810 \| text = transport}}{{GO\|id=GO:0006118 \| text = electron transport}}
	\|COMPONENT={{GO\|id=GO:0009579 \| text = thylakoid}}{{GO\|id=GO:0009507 \| text = chloroplast}}{{GO\|id=GO:0042651 \| text = thylakoid membrane}}{{GO\|id=GO:0016020 \| text = membrane}}		\|COMPONENT={{GO\|id=GO:0009579 \| text = thylakoid}}{{GO\|id=GO:0009507 \| text = chloroplast}}{{GO\|id=GO:0042651 \| text = thylakoid membrane}}{{GO\|id=GO:0016020 \| text = membrane}}
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1frn001 1Frn001], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1frn002 1Frn002]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015701 Ipr015701], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001709 Ipr001709], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001433 Ipr001433], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012146 Ipr012146]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00175 PF00175]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=31521 d1frn_2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=25631 d1frn_1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00455 P00455]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1frn001 1Frn001], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1frn002 1Frn002]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015701 Ipr015701], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001709 Ipr001709], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001433 Ipr001433], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012146 Ipr012146]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00175 PF00175]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=31521 d1frn_2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=25631 d1frn_1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00455 P00455]</span>
-	\|CONSURF={{!}}-	+	\|uPDB=1FRN\|CONSURF={{!}}-
	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]		{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"		{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
	{{!}} '''Toggle Conservation Colors:'''		{{!}} '''Toggle Conservation Colors:'''
	{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}		{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
-	Rows = identical sequences:
-	<jmol>
-	<jmolButton>
-	<script></script>
-	<text>A [x]</text>
-	<name>jmb_1frn_A</name>
-	<title>toggle chain A</title>
-	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
-	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
-	</jmolButton>
-	</jmol>

	}}		}}

OCA at 10:35, 17 February 2009

OCA — Tue, 17 Feb 2009 10:35:14 GMT

←Older revision		Revision as of 10:35, 17 February 2009
Line 1:		Line 1:
-	{{~~StructureD~~	+	{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1frn, resolution 2.00Å (<scene name='initialview01'>~~initial~~ scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1frn]], resolution 2.00Å (<scene name='initialview01'>default scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>		\|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span>
Line 9:		Line 9:
	\|COMPONENT={{GO\|id=GO:0009579 \| text = thylakoid}}{{GO\|id=GO:0009507 \| text = chloroplast}}{{GO\|id=GO:0042651 \| text = thylakoid membrane}}{{GO\|id=GO:0016020 \| text = membrane}}		\|COMPONENT={{GO\|id=GO:0009579 \| text = thylakoid}}{{GO\|id=GO:0009507 \| text = chloroplast}}{{GO\|id=GO:0042651 \| text = thylakoid membrane}}{{GO\|id=GO:0016020 \| text = membrane}}
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1frn001 1Frn001], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1frn002 1Frn002]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015701 Ipr015701], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001709 Ipr001709], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001433 Ipr001433], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012146 Ipr012146]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00175 PF00175]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=31521 d1frn_2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=25631 d1frn_1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00455 P00455]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1frn001 1Frn001], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1frn002 1Frn002]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015701 Ipr015701], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001709 Ipr001709], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001433 Ipr001433], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012146 Ipr012146]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00175 PF00175]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=31521 d1frn_2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=25631 d1frn_1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00455 P00455]</span>
		+	\|CONSURF={{!}}-
		+	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
		+	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
		+	{{!}} '''Toggle Conservation Colors:'''
		+	{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
		+	Rows = identical sequences:
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>A [x]</text>
		+	<name>jmb_1frn_A</name>
		+	<title>toggle chain A</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+
	}}		}}

OCA at 00:50, 1 July 2008

OCA — Tue, 01 Jul 2008 00:50:18 GMT

←Older revision		Revision as of 00:50, 1 July 2008
Line 1:		Line 1:
-	{{~~Structure~~	+	{{StructureD
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE=350\|CAPTION= 1frn, resolution 2.0Å (<scene name='initialview01'>initial scene</scene>)	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1frn, resolution 2.00Å (<scene name='initialview01'>initial scene</scene>)}}}
-	~~\|SITE=~~	+
	\|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>		\|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] </span>
-	\|GENE=
	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00175 NAD_binding_1], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0369 CysJ]</span>		\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00175 NAD_binding_1], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0369 CysJ]</span>
-	\|RELATEDENTRY=
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1frn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1frn OCA], [http://www.ebi.ac.uk/pdbsum/1frn PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1frn RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1frn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1frn OCA], [http://www.ebi.ac.uk/pdbsum/1frn PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1frn RCSB]</span>
		+	\|FUNCTION={{GO\|id=GO:0050661 \| text = NADP binding}}{{GO\|id=GO:0016491 \| text = oxidoreductase activity}}{{GO\|id=GO:0005515 \| text = protein binding}}{{GO\|id=GO:0004324 \| text = ferredoxin-NADP+ reductase activity}}{{GO\|id=GO:0050660 \| text = FAD binding}}
		+	\|PROCESS={{GO\|id=GO:0015979 \| text = photosynthesis}}{{GO\|id=GO:0006810 \| text = transport}}{{GO\|id=GO:0006118 \| text = electron transport}}
		+	\|COMPONENT={{GO\|id=GO:0009579 \| text = thylakoid}}{{GO\|id=GO:0009507 \| text = chloroplast}}{{GO\|id=GO:0042651 \| text = thylakoid membrane}}{{GO\|id=GO:0016020 \| text = membrane}}
		+	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1frn001 1Frn001], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1frn002 1Frn002]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015701 Ipr015701], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001709 Ipr001709], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001433 Ipr001433], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012146 Ipr012146]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00175 PF00175]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=31521 d1frn_2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=25631 d1frn_1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00455 P00455]</span>
	}}		}}

OCA: Protected "Template:STRUCTURE 1frn" [edit=sysop:move=sysop]

OCA — Fri, 02 May 2008 13:41:12 GMT

Protected "Template:STRUCTURE 1frn" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:41, 2 May 2008

OCA: New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1frn, resolution 2.0Å (initial scene) |SITE= |LIGAND= |SITE=
|LIGAND= <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/Ferredoxin--NADP(+)_reductase Ferredoxin--NADP(+) reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.18.1.2 1.18.1.2] 
|GENE=
|DOMAIN=[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00175 NAD_binding_1], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0369 CysJ]
|RELATEDENTRY=
|RESOURCES=[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1frn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1frn OCA], [http://www.ebi.ac.uk/pdbsum/1frn PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1frn RCSB]
}}