Template:STRUCTURE 1g1r - Revision history

OCA at 00:30, 25 March 2013

OCA — Mon, 25 Mar 2013 00:30:03 GMT

←Older revision		Revision as of 00:30, 25 March 2013
Line 14:		Line 14:
	{{!}} '''Toggle Conservation Colors:'''		{{!}} '''Toggle Conservation Colors:'''
	{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}		{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
		+	Rows = identical sequences:
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>A [x]</text>
		+	<name>jmb_1g1r_A</name>
		+	<title>toggle chain A</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>B [x]</text>
		+	<name>jmb_1g1r_B</name>
		+	<title>toggle chain B</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>C [x]</text>
		+	<name>jmb_1g1r_C</name>
		+	<title>toggle chain C</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>D [x]</text>
		+	<name>jmb_1g1r_D</name>
		+	<title>toggle chain D</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>

	}}		}}

OCA at 10:05, 21 November 2012

OCA — Wed, 21 Nov 2012 10:05:39 GMT

←Older revision		Revision as of 10:05, 21 November 2012
Line 1:		Line 1:
	{{Structure		{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1g1r]], resolution 3.40Å (<scene name='initialview01'>default scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1g1r]], [[Resolution\|resolution]] 3.40Å (<scene name='initialview01'>default scene</scene>)}}}
-	\|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>	+	\|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MAG:BETA-METHYL-N-ACETYL-D-GLUCOSAMINE'>MAG</scene>
-	~~\|DOMAIN=~~<~~span class~~='~~plainlinks~~'>~~[http:~~/~~/www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid~~=~~cd00054 EGF_CA], [http~~:/~~/www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid~~=~~cd03592 CLECT_selectins_like]~~</~~span~~>	+
	\|RELATEDENTRY=[[1g1q\|1g1q]], [[1g1s\|1g1s]], [[1g1t\|1g1t]]		\|RELATEDENTRY=[[1g1q\|1g1q]], [[1g1s\|1g1s]], [[1g1t\|1g1t]]
-	\|NONSTDRES=~~<scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MAG:ALPHA-METHYL-N-ACETYL-D-GLUCOSAMINE'>MAG</scene>,~~ <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene>	+	\|NONSTDRES=<scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene>
-	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1g1r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g1r OCA], [http://www.~~ebi~~.~~ac.uk~~/~~pdbsum~~/1g1r ~~PDBsum~~], [http://www.~~rcsb~~.~~org~~/~~pdb~~/~~explore.do?structureId=~~1g1r ~~RCSB~~]</span>	+	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1g1r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g1r OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1g1r RCSB], [http://www.ebi.ac.uk/pdbsum/1g1r PDBsum]</span>
	\|FUNCTION={{GO\|id=GO:0005529 \| text = sugar binding}}{{GO\|id=GO:0005515 \| text = protein binding}}{{GO\|id=GO:0030246 \| text = carbohydrate binding}}		\|FUNCTION={{GO\|id=GO:0005529 \| text = sugar binding}}{{GO\|id=GO:0005515 \| text = protein binding}}{{GO\|id=GO:0030246 \| text = carbohydrate binding}}
	\|PROCESS={{GO\|id=GO:0007155 \| text = cell adhesion}}		\|PROCESS={{GO\|id=GO:0007155 \| text = cell adhesion}}
	\|COMPONENT={{GO\|id=GO:0016021 \| text = integral to membrane}}{{GO\|id=GO:0016020 \| text = membrane}}{{GO\|id=GO:0005886 \| text = plasma membrane}}{{GO\|id=GO:0005624 \| text = membrane fraction}}{{GO\|id=GO:0005887 \| text = integral to plasma membrane}}{{GO\|id=GO:0031092 \| text = platelet alpha granule membrane}}{{GO\|id=GO:0005625 \| text = soluble fraction}}		\|COMPONENT={{GO\|id=GO:0016021 \| text = integral to membrane}}{{GO\|id=GO:0016020 \| text = membrane}}{{GO\|id=GO:0005886 \| text = plasma membrane}}{{GO\|id=GO:0005624 \| text = membrane fraction}}{{GO\|id=GO:0005887 \| text = integral to plasma membrane}}{{GO\|id=GO:0031092 \| text = platelet alpha granule membrane}}{{GO\|id=GO:0005625 \| text = soluble fraction}}
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rA02 1G1Ra02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rA01 1G1Ra01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rB01 1G1Rb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rB02 1G1Rb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rC01 1G1Rc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rC02 1G1Rc02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rD02 1G1Rd02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rD01 1G1Rd01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006210 Ipr006210], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002396 Ipr002396], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013032 Ipr013032], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000436 Ipr000436], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006209 Ipr006209], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001304 Ipr001304], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000742 Ipr000742]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00008 PF00008], [http://pfam.sanger.ac.uk/family?acc=PF00059 PF00059]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65092 d1g1ra1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65093 d1g1ra2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65095 d1g1rb2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65094 d1g1rb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65096 d1g1rc1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65097 d1g1rc2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65099 d1g1rd2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65098 d1g1rd1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P16109 P16109]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rA02 1G1Ra02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rA01 1G1Ra01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rB01 1G1Rb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rB02 1G1Rb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rC01 1G1Rc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rC02 1G1Rc02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rD02 1G1Rd02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rD01 1G1Rd01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006210 Ipr006210], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002396 Ipr002396], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013032 Ipr013032], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000436 Ipr000436], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006209 Ipr006209], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001304 Ipr001304], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000742 Ipr000742]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00008 PF00008], [http://pfam.sanger.ac.uk/family?acc=PF00059 PF00059]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65092 d1g1ra1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65093 d1g1ra2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65095 d1g1rb2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65094 d1g1rb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65096 d1g1rc1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65097 d1g1rc2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65099 d1g1rd2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65098 d1g1rd1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P16109 P16109]</span>
-	\|~~FARESOURCES~~=~~<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=SELP SELP]</span>~~	+	\|uPDB=1G1R\|CONSURF={{!}}-
-	\|CONSURF={{!}}-	+
	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]		{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"		{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
	{{!}} '''Toggle Conservation Colors:'''		{{!}} '''Toggle Conservation Colors:'''
	{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}		{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
-	Rows = identical sequences:
-	<jmol>
-	<jmolButton>
-	<script></script>
-	<text>A [x]</text>
-	<name>jmb_1g1r_A</name>
-	<title>toggle chain A</title>
-	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
-	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
-	</jmolButton>
-	</jmol>
-	<jmol>
-	<jmolButton>
-	<script></script>
-	<text>B [x]</text>
-	<name>jmb_1g1r_B</name>
-	<title>toggle chain B</title>
-	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
-	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
-	</jmolButton>
-	</jmol>
-	<jmol>
-	<jmolButton>
-	<script></script>
-	<text>C [x]</text>
-	<name>jmb_1g1r_C</name>
-	<title>toggle chain C</title>
-	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
-	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
-	</jmolButton>
-	</jmol>
-	<jmol>
-	<jmolButton>
-	<script></script>
-	<text>D [x]</text>
-	<name>jmb_1g1r_D</name>
-	<title>toggle chain D</title>
-	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
-	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
-	</jmolButton>
-	</jmol>

	}}		}}

OCA at 13:39, 17 February 2009

OCA — Tue, 17 Feb 2009 13:39:44 GMT

←Older revision		Revision as of 13:39, 17 February 2009
Line 1:		Line 1:
-	{{~~StructureD~~	+	{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1g1r, resolution 3.40Å (<scene name='initialview01'>~~initial~~ scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1g1r]], resolution 3.40Å (<scene name='initialview01'>default scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>		\|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>
	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054 EGF_CA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03592 CLECT_selectins_like]</span>		\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054 EGF_CA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03592 CLECT_selectins_like]</span>
Line 11:		Line 11:
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rA02 1G1Ra02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rA01 1G1Ra01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rB01 1G1Rb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rB02 1G1Rb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rC01 1G1Rc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rC02 1G1Rc02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rD02 1G1Rd02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rD01 1G1Rd01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006210 Ipr006210], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002396 Ipr002396], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013032 Ipr013032], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000436 Ipr000436], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006209 Ipr006209], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001304 Ipr001304], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000742 Ipr000742]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00008 PF00008], [http://pfam.sanger.ac.uk/family?acc=PF00059 PF00059]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65092 d1g1ra1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65093 d1g1ra2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65095 d1g1rb2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65094 d1g1rb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65096 d1g1rc1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65097 d1g1rc2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65099 d1g1rd2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65098 d1g1rd1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P16109 P16109]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rA02 1G1Ra02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rA01 1G1Ra01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rB01 1G1Rb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rB02 1G1Rb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rC01 1G1Rc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rC02 1G1Rc02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rD02 1G1Rd02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rD01 1G1Rd01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006210 Ipr006210], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002396 Ipr002396], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013032 Ipr013032], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000436 Ipr000436], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006209 Ipr006209], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001304 Ipr001304], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000742 Ipr000742]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00008 PF00008], [http://pfam.sanger.ac.uk/family?acc=PF00059 PF00059]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65092 d1g1ra1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65093 d1g1ra2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65095 d1g1rb2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65094 d1g1rb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65096 d1g1rc1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65097 d1g1rc2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65099 d1g1rd2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65098 d1g1rd1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P16109 P16109]</span>
	\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=SELP SELP]</span>		\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=SELP SELP]</span>
		+	\|CONSURF={{!}}-
		+	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
		+	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
		+	{{!}} '''Toggle Conservation Colors:'''
		+	{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
		+	Rows = identical sequences:
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>A [x]</text>
		+	<name>jmb_1g1r_A</name>
		+	<title>toggle chain A</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>B [x]</text>
		+	<name>jmb_1g1r_B</name>
		+	<title>toggle chain B</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>C [x]</text>
		+	<name>jmb_1g1r_C</name>
		+	<title>toggle chain C</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>D [x]</text>
		+	<name>jmb_1g1r_D</name>
		+	<title>toggle chain D</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+
	}}		}}

OCA at 01:16, 1 July 2008

OCA — Tue, 01 Jul 2008 01:16:32 GMT

←Older revision		Revision as of 01:16, 1 July 2008
Line 1:		Line 1:
	{{StructureD		{{StructureD
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1g1r, resolution 3.4Å (<scene name='initialview01'>initial scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1g1r, resolution 3.40Å (<scene name='initialview01'>initial scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>		\|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>
	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054 EGF_CA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03592 CLECT_selectins_like]</span>		\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054 EGF_CA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03592 CLECT_selectins_like]</span>
Line 10:		Line 10:
	\|COMPONENT={{GO\|id=GO:0016021 \| text = integral to membrane}}{{GO\|id=GO:0016020 \| text = membrane}}{{GO\|id=GO:0005886 \| text = plasma membrane}}{{GO\|id=GO:0005624 \| text = membrane fraction}}{{GO\|id=GO:0005887 \| text = integral to plasma membrane}}{{GO\|id=GO:0031092 \| text = platelet alpha granule membrane}}{{GO\|id=GO:0005625 \| text = soluble fraction}}		\|COMPONENT={{GO\|id=GO:0016021 \| text = integral to membrane}}{{GO\|id=GO:0016020 \| text = membrane}}{{GO\|id=GO:0005886 \| text = plasma membrane}}{{GO\|id=GO:0005624 \| text = membrane fraction}}{{GO\|id=GO:0005887 \| text = integral to plasma membrane}}{{GO\|id=GO:0031092 \| text = platelet alpha granule membrane}}{{GO\|id=GO:0005625 \| text = soluble fraction}}
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rA02 1G1Ra02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rA01 1G1Ra01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rB01 1G1Rb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rB02 1G1Rb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rC01 1G1Rc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rC02 1G1Rc02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rD02 1G1Rd02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rD01 1G1Rd01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006210 Ipr006210], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002396 Ipr002396], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013032 Ipr013032], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000436 Ipr000436], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006209 Ipr006209], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001304 Ipr001304], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000742 Ipr000742]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00008 PF00008], [http://pfam.sanger.ac.uk/family?acc=PF00059 PF00059]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65092 d1g1ra1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65093 d1g1ra2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65095 d1g1rb2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65094 d1g1rb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65096 d1g1rc1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65097 d1g1rc2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65099 d1g1rd2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65098 d1g1rd1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P16109 P16109]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rA02 1G1Ra02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rA01 1G1Ra01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rB01 1G1Rb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rB02 1G1Rb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rC01 1G1Rc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rC02 1G1Rc02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rD02 1G1Rd02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rD01 1G1Rd01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006210 Ipr006210], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002396 Ipr002396], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013032 Ipr013032], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000436 Ipr000436], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006209 Ipr006209], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001304 Ipr001304], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000742 Ipr000742]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00008 PF00008], [http://pfam.sanger.ac.uk/family?acc=PF00059 PF00059]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65092 d1g1ra1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65093 d1g1ra2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65095 d1g1rb2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65094 d1g1rb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65096 d1g1rc1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65097 d1g1rc2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65099 d1g1rd2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65098 d1g1rd1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P16109 P16109]</span>
-	\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=~~P16109 P16109~~]</span>	+	\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=SELP SELP]</span>
	}}		}}

OCA at 12:21, 18 June 2008

OCA — Wed, 18 Jun 2008 12:21:49 GMT

←Older revision		Revision as of 12:21, 18 June 2008
Line 1:		Line 1:
-	{{~~Structure~~	+	{{StructureD
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE=350\|CAPTION= 1g1r, resolution 3.4Å (<scene name='initialview01'>initial scene</scene>)	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1g1r, resolution 3.4Å (<scene name='initialview01'>initial scene</scene>)}}}
-	~~\|SITE=~~	+	\|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>
-	\|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA~~</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MAG:ALPHA-METHYL-N-ACETYL-D-GLUCOSAMINE'>MAG~~</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>~~, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene>~~	+
-	~~\|ACTIVITY=~~	+
-	~~\|GENE=~~	+
	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054 EGF_CA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03592 CLECT_selectins_like]</span>		\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054 EGF_CA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03592 CLECT_selectins_like]</span>
	\|RELATEDENTRY=[[1g1q\|1g1q]], [[1g1s\|1g1s]], [[1g1t\|1g1t]]		\|RELATEDENTRY=[[1g1q\|1g1q]], [[1g1s\|1g1s]], [[1g1t\|1g1t]]
		+	\|NONSTDRES=<scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MAG:ALPHA-METHYL-N-ACETYL-D-GLUCOSAMINE'>MAG</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene>
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1g1r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g1r OCA], [http://www.ebi.ac.uk/pdbsum/1g1r PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1g1r RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1g1r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g1r OCA], [http://www.ebi.ac.uk/pdbsum/1g1r PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1g1r RCSB]</span>
		+	\|FUNCTION={{GO\|id=GO:0005529 \| text = sugar binding}}{{GO\|id=GO:0005515 \| text = protein binding}}{{GO\|id=GO:0030246 \| text = carbohydrate binding}}
		+	\|PROCESS={{GO\|id=GO:0007155 \| text = cell adhesion}}
		+	\|COMPONENT={{GO\|id=GO:0016021 \| text = integral to membrane}}{{GO\|id=GO:0016020 \| text = membrane}}{{GO\|id=GO:0005886 \| text = plasma membrane}}{{GO\|id=GO:0005624 \| text = membrane fraction}}{{GO\|id=GO:0005887 \| text = integral to plasma membrane}}{{GO\|id=GO:0031092 \| text = platelet alpha granule membrane}}{{GO\|id=GO:0005625 \| text = soluble fraction}}
		+	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rA02 1G1Ra02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rA01 1G1Ra01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rB01 1G1Rb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rB02 1G1Rb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rC01 1G1Rc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rC02 1G1Rc02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rD02 1G1Rd02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1g1rD01 1G1Rd01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006210 Ipr006210], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002396 Ipr002396], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013032 Ipr013032], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000436 Ipr000436], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006209 Ipr006209], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001304 Ipr001304], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000742 Ipr000742]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00008 PF00008], [http://pfam.sanger.ac.uk/family?acc=PF00059 PF00059]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65092 d1g1ra1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65093 d1g1ra2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65095 d1g1rb2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65094 d1g1rb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65096 d1g1rc1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65097 d1g1rc2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65099 d1g1rd2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65098 d1g1rd1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P16109 P16109]</span>
		+	\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=P16109 P16109]</span>
	}}		}}

OCA: Protected "Template:STRUCTURE 1g1r" [edit=sysop:move=sysop]

OCA — Fri, 02 May 2008 14:01:39 GMT

Protected "Template:STRUCTURE 1g1r" [edit=sysop:move=sysop]

←Older revision

Revision as of 14:01, 2 May 2008

OCA: New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1g1r, resolution 3.4Å (initial scene) |SITE= |LIGAND= |SITE=
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MAG:ALPHA-METHYL-N-ACETYL-D-GLUCOSAMINE'>MAG</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene>
|ACTIVITY=
|GENE=
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00054 EGF_CA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03592 CLECT_selectins_like]</span>
|RELATEDENTRY=[[1g1q|1g1q]], [[1g1s|1g1s]], [[1g1t|1g1t]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1g1r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g1r OCA], [http://www.ebi.ac.uk/pdbsum/1g1r PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1g1r RCSB]</span>
}}