Template:STRUCTURE 1gpa - Revision history

OCA at 07:07, 13 June 2012

OCA — Wed, 13 Jun 2012 07:07:43 GMT

←Older revision		Revision as of 07:07, 13 June 2012
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	{{Structure		{{Structure
	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1gpa]], [[Resolution\|resolution]] 2.90Å (<scene name='initialview01'>default scene</scene>)}}}		\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1gpa]], [[Resolution\|resolution]] 2.90Å (<scene name='initialview01'>default scene</scene>)}}}
-	\|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+So4+A+901'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+So4+A+902'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+So4+B+901'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+So4+B+902'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+So4+C+901'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+So4+C+902'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+So4+D+901'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+So4+D+902'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Plp+A+999'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Plp+B+999'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Plp+C+999'>BC2</scene> and <scene name='pdbsite=BC3:Binding+Site+For+Residue+Plp+D+999'>BC3</scene>
	\|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>		\|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span>

OCA at 13:41, 3 June 2012

OCA — Sun, 03 Jun 2012 13:41:17 GMT

←Older revision		Revision as of 13:41, 3 June 2012
Line 4:		Line 4:
	\|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>		\|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span>
-	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00343 Phosphorylase], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0058 GlgP]</span>
	\|NONSTDRES=<scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene>		\|NONSTDRES=<scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene>
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gpa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gpa OCA], [http://www.ebi.ac.uk/pdbsum/1gpa PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1gpa RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gpa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gpa OCA], [http://www.ebi.ac.uk/pdbsum/1gpa PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1gpa RCSB]</span>

OCA at 20:26, 20 January 2010

OCA — Wed, 20 Jan 2010 20:26:53 GMT

←Older revision		Revision as of 20:26, 20 January 2010
Line 1:		Line 1:
	{{Structure		{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1gpa]], [[Resolution \| resolution]] 2.90Å (<scene name='initialview01'>default scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1gpa]], [[Resolution\|resolution]] 2.90Å (<scene name='initialview01'>default scene</scene>)}}}
	\|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+So4+A+901'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+So4+A+902'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+So4+B+901'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+So4+B+902'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+So4+C+901'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+So4+C+902'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+So4+D+901'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+So4+D+902'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Plp+A+999'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Plp+B+999'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Plp+C+999'>BC2</scene> and <scene name='pdbsite=BC3:Binding+Site+For+Residue+Plp+D+999'>BC3</scene>		\|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+So4+A+901'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+So4+A+902'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+So4+B+901'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+So4+B+902'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+So4+C+901'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+So4+C+902'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+So4+D+901'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+So4+D+902'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Plp+A+999'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Plp+B+999'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Plp+C+999'>BC2</scene> and <scene name='pdbsite=BC3:Binding+Site+For+Residue+Plp+D+999'>BC3</scene>
	\|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>		\|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span>
		+	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00343 Phosphorylase], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0058 GlgP]</span>
	\|NONSTDRES=<scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene>		\|NONSTDRES=<scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene>
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gpa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gpa OCA], [http://www.ebi.ac.uk/pdbsum/1gpa PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1gpa RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gpa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gpa OCA], [http://www.ebi.ac.uk/pdbsum/1gpa PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1gpa RCSB]</span>

OCA at 17:15, 10 June 2009

OCA — Wed, 10 Jun 2009 17:15:38 GMT

←Older revision		Revision as of 17:15, 10 June 2009
Line 1:		Line 1:
	{{Structure		{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1gpa]], resolution 2.90Å (<scene name='initialview01'>default scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1gpa]], [[Resolution \| resolution]] 2.90Å (<scene name='initialview01'>default scene</scene>)}}}
	\|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+So4+A+901'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+So4+A+902'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+So4+B+901'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+So4+B+902'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+So4+C+901'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+So4+C+902'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+So4+D+901'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+So4+D+902'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Plp+A+999'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Plp+B+999'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Plp+C+999'>BC2</scene> and <scene name='pdbsite=BC3:Binding+Site+For+Residue+Plp+D+999'>BC3</scene>		\|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+So4+A+901'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+So4+A+902'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+So4+B+901'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+So4+B+902'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+So4+C+901'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+So4+C+902'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+So4+D+901'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+So4+D+902'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Plp+A+999'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Plp+B+999'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Plp+C+999'>BC2</scene> and <scene name='pdbsite=BC3:Binding+Site+For+Residue+Plp+D+999'>BC3</scene>
	\|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>		\|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span>
-	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00343 Phosphorylase], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0058 GlgP]</span>
	\|NONSTDRES=<scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene>		\|NONSTDRES=<scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene>
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gpa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gpa OCA], [http://www.ebi.ac.uk/pdbsum/1gpa PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1gpa RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gpa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gpa OCA], [http://www.ebi.ac.uk/pdbsum/1gpa PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1gpa RCSB]</span>

OCA at 15:12, 10 June 2009

OCA — Wed, 10 Jun 2009 15:12:43 GMT

←Older revision		Revision as of 15:12, 10 June 2009
Line 1:		Line 1:
	{{Structure		{{Structure
	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1gpa]], resolution 2.90Å (<scene name='initialview01'>default scene</scene>)}}}		\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1gpa]], resolution 2.90Å (<scene name='initialview01'>default scene</scene>)}}}
-	\|~~LIGAND~~= <scene name='~~pdbligand~~=~~PLP~~:~~PYRIDOXAL-5-PHOSPHATE~~'>~~PLP~~</scene>, <scene name='~~pdbligand~~=~~PO3~~:~~PHOSPHITE~~+~~ION~~'>~~PO3~~</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>	+	\|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+So4+A+901'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+So4+A+902'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+So4+B+901'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+So4+B+902'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+So4+C+901'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+So4+C+902'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+So4+D+901'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+So4+D+902'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Plp+A+999'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Plp+B+999'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Plp+C+999'>BC2</scene> and <scene name='pdbsite=BC3:Binding+Site+For+Residue+Plp+D+999'>BC3</scene>
		+	\|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span>
	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00343 Phosphorylase], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0058 GlgP]</span>		\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00343 Phosphorylase], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0058 GlgP]</span>
		+	\|NONSTDRES=<scene name='pdbligand=SEP:PHOSPHOSERINE'>SEP</scene>
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gpa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gpa OCA], [http://www.ebi.ac.uk/pdbsum/1gpa PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1gpa RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gpa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gpa OCA], [http://www.ebi.ac.uk/pdbsum/1gpa PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1gpa RCSB]</span>
-	\|FUNCTION={{GO\|id=GO:0003824 \| text = catalytic activity}}{{GO\|id=GO:0004645 \| text = phosphorylase activity}}{{GO\|id=GO:0016757 \| text = transferase activity, transferring glycosyl groups}}{{GO\|id=GO:0016740 \| text = transferase activity}}{{GO\|id=GO:0000166 \| text = nucleotide binding}}{{GO\|id=GO:0030170 \| text = pyridoxal phosphate binding}}	+	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/1gpaA02 1Gpaa02], [http://www.cathdb.info/domain/1gpaA01 1Gpaa01], [http://www.cathdb.info/domain/1gpaB02 1Gpab02], [http://www.cathdb.info/domain/1gpaB01 1Gpab01], [http://www.cathdb.info/domain/1gpaC01 1Gpac01], [http://www.cathdb.info/domain/1gpaC02 1Gpac02], [http://www.cathdb.info/domain/1gpaD01 1Gpad01], [http://www.cathdb.info/domain/1gpaD02 1Gpad02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011833 Ipr011833], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000811 Ipr000811]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00343 PF00343]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35528 d1gpaa_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35529 d1gpab_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35530 d1gpac_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35531 d1gpad_]<br>UniProt : [http://www.uniprot.org/uniprot/P00489 P00489]</span>
-	~~\|PROCESS={{GO\|id=GO:0005977 \| text = glycogen metabolic process}}{{GO\|id=GO:0005975 \| text = carbohydrate metabolic process}}~~	+	\|uPDB=1GPA\|CONSURF={{!}}-
-	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/~~cgi-bin~~/~~cath/Domain.pl?domain_id=~~1gpaA02 1Gpaa02], [http://www.cathdb.info/~~cgi-bin~~/~~cath/Domain.pl?domain_id=~~1gpaA01 1Gpaa01], [http://www.cathdb.info/~~cgi-bin~~/~~cath/Domain.pl?domain_id=~~1gpaB02 1Gpab02], [http://www.cathdb.info/~~cgi-bin~~/~~cath/Domain.pl?domain_id=~~1gpaB01 1Gpab01], [http://www.cathdb.info/~~cgi-bin~~/~~cath/Domain.pl?domain_id=~~1gpaC01 1Gpac01], [http://www.cathdb.info/~~cgi-bin~~/~~cath/Domain.pl?domain_id=~~1gpaC02 1Gpac02], [http://www.cathdb.info/~~cgi-bin~~/~~cath/Domain.pl?domain_id=~~1gpaD01 1Gpad01], [http://www.cathdb.info/~~cgi-bin~~/~~cath/Domain.pl?domain_id=~~1gpaD02 1Gpad02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=~~IPR000811 Ipr000811~~], [http://www.ebi.ac.uk/interpro/ISearch?query=~~IPR011833 Ipr011833~~]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00343 PF00343]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35528 d1gpaa_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35529 d1gpab_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35530 d1gpac_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35531 d1gpad_]<br>UniProt : [http://ca.~~expasy~~.org/~~cgi-bin~~/~~niceprot.pl?~~P00489 P00489]</span>	+
-	\|CONSURF={{!}}-	+
	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]		{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"		{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

OCA at 17:06, 16 February 2009

OCA — Mon, 16 Feb 2009 17:06:31 GMT

←Older revision		Revision as of 17:06, 16 February 2009
Line 1:		Line 1:
-	{{~~StructureD~~	+	{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1gpa, resolution 2.90Å (<scene name='initialview01'>~~initial~~ scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1gpa]], resolution 2.90Å (<scene name='initialview01'>default scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=PO3:PHOSPHITE+ION'>PO3</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>		\|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=PO3:PHOSPHITE+ION'>PO3</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span>
Line 8:		Line 8:
	\|PROCESS={{GO\|id=GO:0005977 \| text = glycogen metabolic process}}{{GO\|id=GO:0005975 \| text = carbohydrate metabolic process}}		\|PROCESS={{GO\|id=GO:0005977 \| text = glycogen metabolic process}}{{GO\|id=GO:0005975 \| text = carbohydrate metabolic process}}
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaA02 1Gpaa02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaA01 1Gpaa01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaB02 1Gpab02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaB01 1Gpab01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaC01 1Gpac01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaC02 1Gpac02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaD01 1Gpad01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaD02 1Gpad02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000811 Ipr000811], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011833 Ipr011833]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00343 PF00343]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35528 d1gpaa_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35529 d1gpab_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35530 d1gpac_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35531 d1gpad_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00489 P00489]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaA02 1Gpaa02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaA01 1Gpaa01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaB02 1Gpab02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaB01 1Gpab01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaC01 1Gpac01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaC02 1Gpac02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaD01 1Gpad01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaD02 1Gpad02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000811 Ipr000811], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011833 Ipr011833]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00343 PF00343]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35528 d1gpaa_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35529 d1gpab_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35530 d1gpac_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35531 d1gpad_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00489 P00489]</span>
		+	\|CONSURF={{!}}-
		+	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
		+	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
		+	{{!}} '''Toggle Conservation Colors:'''
		+	{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
		+	Rows = identical sequences:
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>A [x]</text>
		+	<name>jmb_1gpa_A</name>
		+	<title>toggle chain A</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>B [x]</text>
		+	<name>jmb_1gpa_B</name>
		+	<title>toggle chain B</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>C [x]</text>
		+	<name>jmb_1gpa_C</name>
		+	<title>toggle chain C</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>D [x]</text>
		+	<name>jmb_1gpa_D</name>
		+	<title>toggle chain D</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+
	}}		}}

OCA at 02:38, 1 July 2008

OCA — Tue, 01 Jul 2008 02:38:13 GMT

←Older revision		Revision as of 02:38, 1 July 2008
Line 1:		Line 1:
	{{StructureD		{{StructureD
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1gpa, resolution 2.9Å (<scene name='initialview01'>initial scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1gpa, resolution 2.90Å (<scene name='initialview01'>initial scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=PO3:PHOSPHITE+ION'>PO3</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>		\|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=PO3:PHOSPHITE+ION'>PO3</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span>

OCA at 14:26, 26 June 2008

OCA — Thu, 26 Jun 2008 14:26:09 GMT

←Older revision		Revision as of 14:26, 26 June 2008
Line 1:		Line 1:
-	{{~~Structure~~	+	{{StructureD
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE=350\|CAPTION= 1gpa, resolution 2.9Å (<scene name='initialview01'>initial scene</scene>)	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1gpa, resolution 2.9Å (<scene name='initialview01'>initial scene</scene>)}}}
-	~~\|SITE=~~	+	\|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=PO3:PHOSPHITE+ION'>PO3</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
-	\|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5~~'~~-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=PO3:PHOSPHITE+ION'>PO3</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>	+
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] </span>
-	\|GENE=
	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00343 Phosphorylase], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0058 GlgP]</span>		\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00343 Phosphorylase], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0058 GlgP]</span>
-	\|RELATEDENTRY=
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gpa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gpa OCA], [http://www.ebi.ac.uk/pdbsum/1gpa PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1gpa RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gpa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gpa OCA], [http://www.ebi.ac.uk/pdbsum/1gpa PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1gpa RCSB]</span>
		+	\|FUNCTION={{GO\|id=GO:0003824 \| text = catalytic activity}}{{GO\|id=GO:0004645 \| text = phosphorylase activity}}{{GO\|id=GO:0016757 \| text = transferase activity, transferring glycosyl groups}}{{GO\|id=GO:0016740 \| text = transferase activity}}{{GO\|id=GO:0000166 \| text = nucleotide binding}}{{GO\|id=GO:0030170 \| text = pyridoxal phosphate binding}}
		+	\|PROCESS={{GO\|id=GO:0005977 \| text = glycogen metabolic process}}{{GO\|id=GO:0005975 \| text = carbohydrate metabolic process}}
		+	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaA02 1Gpaa02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaA01 1Gpaa01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaB02 1Gpab02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaB01 1Gpab01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaC01 1Gpac01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaC02 1Gpac02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaD01 1Gpad01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gpaD02 1Gpad02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000811 Ipr000811], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011833 Ipr011833]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00343 PF00343]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35528 d1gpaa_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35529 d1gpab_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35530 d1gpac_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35531 d1gpad_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00489 P00489]</span>
	}}		}}

OCA: Protected "Template:STRUCTURE 1gpa" [edit=sysop:move=sysop]

OCA — Fri, 02 May 2008 14:51:04 GMT

Protected "Template:STRUCTURE 1gpa" [edit=sysop:move=sysop]

←Older revision

Revision as of 14:51, 2 May 2008

OCA: New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1gpa, resolution 2.9Å (initial scene) |SITE= |LIGAND= |SITE=
|LIGAND= <scene name='pdbligand=PLP:PYRIDOXAL-5'-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=PO3:PHOSPHITE+ION'>PO3</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/Phosphorylase Phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.1 2.4.1.1] 
|GENE=
|DOMAIN=[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00343 Phosphorylase], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0058 GlgP]
|RELATEDENTRY=
|RESOURCES=[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gpa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gpa OCA], [http://www.ebi.ac.uk/pdbsum/1gpa PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1gpa RCSB]
}}