Template:STRUCTURE 1ljy - Revision history

OCA at 21:19, 5 December 2012

OCA — Wed, 05 Dec 2012 21:19:17 GMT

←Older revision		Revision as of 21:19, 5 December 2012
Line 1:		Line 1:
	{{Structure		{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1ljy]], resolution 2.90Å (<scene name='initialview01'>default scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1ljy]], [[Resolution\|resolution]] 2.90Å (<scene name='initialview01'>default scene</scene>)}}}
-	\|LIGAND= <scene name='pdbligand=NAG:~~SUGAR+(NAG~~-~~NAG)~~'>NAG</scene>, <scene name='pdbligand=NDG:~~SUGAR+(~~2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE)'>NDG</scene>	+	\|LIGAND= <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>
-	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00704 Glyco_hydro_18], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00636 Glyco_18]</span>	+	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ljy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ljy OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ljy RCSB], [http://www.ebi.ac.uk/pdbsum/1ljy PDBsum]</span>
-	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ljy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ljy OCA], [http://www.~~ebi~~.~~ac.uk~~/~~pdbsum~~/1ljy ~~PDBsum~~], [http://www.~~rcsb~~.~~org~~/~~pdb~~/~~explore.do?structureId=~~1ljy ~~RCSB~~]</span>	+
	\|FUNCTION={{GO\|id=GO:0004553 \| text = hydrolase activity, hydrolyzing O-glycosyl compounds}}{{GO\|id=GO:0043169 \| text = cation binding}}{{GO\|id=GO:0003824 \| text = catalytic activity}}{{GO\|id=GO:0004568 \| text = chitinase activity}}{{GO\|id=GO:0005529 \| text = sugar binding}}		\|FUNCTION={{GO\|id=GO:0004553 \| text = hydrolase activity, hydrolyzing O-glycosyl compounds}}{{GO\|id=GO:0043169 \| text = cation binding}}{{GO\|id=GO:0003824 \| text = catalytic activity}}{{GO\|id=GO:0004568 \| text = chitinase activity}}{{GO\|id=GO:0005529 \| text = sugar binding}}
	\|PROCESS={{GO\|id=GO:0005975 \| text = carbohydrate metabolic process}}{{GO\|id=GO:0006032 \| text = chitin catabolic process}}		\|PROCESS={{GO\|id=GO:0005975 \| text = carbohydrate metabolic process}}{{GO\|id=GO:0006032 \| text = chitin catabolic process}}
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ljyA01 1Ljya01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ljyA02 1Ljya02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013781 Ipr013781], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001223 Ipr001223], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015821 Ipr015821], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001579 Ipr001579], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011583 Ipr011583]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00704 PF00704]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=84618 d1ljya1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=84619 d1ljya2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q8SPQ0 Q8SPQ0]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ljyA01 1Ljya01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ljyA02 1Ljya02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013781 Ipr013781], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001223 Ipr001223], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015821 Ipr015821], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001579 Ipr001579], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011583 Ipr011583]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00704 PF00704]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=84618 d1ljya1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=84619 d1ljya2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q8SPQ0 Q8SPQ0]</span>
-	\|CONSURF={{!}}-	+	\|uPDB=1LJY\|CONSURF={{!}}-
	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]		{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"		{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

OCA at 07:40, 17 February 2009

OCA — Tue, 17 Feb 2009 07:40:10 GMT

←Older revision		Revision as of 07:40, 17 February 2009
Line 1:		Line 1:
-	{{~~StructureD~~	+	{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1ljy, resolution 2.90Å (<scene name='initialview01'>~~initial~~ scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1ljy]], resolution 2.90Å (<scene name='initialview01'>default scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=NAG:SUGAR+(NAG-NAG)'>NAG</scene>, <scene name='pdbligand=NDG:SUGAR+(2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE)'>NDG</scene>		\|LIGAND= <scene name='pdbligand=NAG:SUGAR+(NAG-NAG)'>NAG</scene>, <scene name='pdbligand=NDG:SUGAR+(2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE)'>NDG</scene>
	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00704 Glyco_hydro_18], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00636 Glyco_18]</span>		\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00704 Glyco_hydro_18], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00636 Glyco_18]</span>
Line 7:		Line 7:
	\|PROCESS={{GO\|id=GO:0005975 \| text = carbohydrate metabolic process}}{{GO\|id=GO:0006032 \| text = chitin catabolic process}}		\|PROCESS={{GO\|id=GO:0005975 \| text = carbohydrate metabolic process}}{{GO\|id=GO:0006032 \| text = chitin catabolic process}}
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ljyA01 1Ljya01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ljyA02 1Ljya02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013781 Ipr013781], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001223 Ipr001223], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015821 Ipr015821], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001579 Ipr001579], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011583 Ipr011583]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00704 PF00704]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=84618 d1ljya1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=84619 d1ljya2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q8SPQ0 Q8SPQ0]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ljyA01 1Ljya01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ljyA02 1Ljya02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013781 Ipr013781], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001223 Ipr001223], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015821 Ipr015821], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001579 Ipr001579], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011583 Ipr011583]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00704 PF00704]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=84618 d1ljya1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=84619 d1ljya2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q8SPQ0 Q8SPQ0]</span>
		+	\|CONSURF={{!}}-
		+	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
		+	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
		+	{{!}} '''Toggle Conservation Colors:'''
		+	{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
		+	Rows = identical sequences:
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>A [x]</text>
		+	<name>jmb_1ljy_A</name>
		+	<title>toggle chain A</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+
	}}		}}

OCA at 18:02, 2 July 2008

OCA — Wed, 02 Jul 2008 18:02:32 GMT

←Older revision		Revision as of 18:02, 2 July 2008
Line 1:		Line 1:
-	{{~~Structure~~	+	{{StructureD
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE=350\|CAPTION= 1ljy, resolution 2.90Å (<scene name='initialview01'>initial scene</scene>)	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1ljy, resolution 2.90Å (<scene name='initialview01'>initial scene</scene>)}}}
-	~~\|SITE=~~	+	\|LIGAND= <scene name='pdbligand=NAG:SUGAR+(NAG-NAG)'>NAG</scene>, <scene name='pdbligand=NDG:SUGAR+(2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE)'>NDG</scene>
-	\|LIGAND= <scene name='pdbligand=NAG:~~N-ACETYL~~-~~D-GLUCOSAMINE~~'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>	+
-	~~\|ACTIVITY=~~	+
-	~~\|GENE=~~	+
	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00704 Glyco_hydro_18], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00636 Glyco_18]</span>		\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00704 Glyco_hydro_18], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00636 Glyco_18]</span>
-	\|RELATEDENTRY=
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ljy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ljy OCA], [http://www.ebi.ac.uk/pdbsum/1ljy PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ljy RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ljy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ljy OCA], [http://www.ebi.ac.uk/pdbsum/1ljy PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ljy RCSB]</span>
		+	\|FUNCTION={{GO\|id=GO:0004553 \| text = hydrolase activity, hydrolyzing O-glycosyl compounds}}{{GO\|id=GO:0043169 \| text = cation binding}}{{GO\|id=GO:0003824 \| text = catalytic activity}}{{GO\|id=GO:0004568 \| text = chitinase activity}}{{GO\|id=GO:0005529 \| text = sugar binding}}
		+	\|PROCESS={{GO\|id=GO:0005975 \| text = carbohydrate metabolic process}}{{GO\|id=GO:0006032 \| text = chitin catabolic process}}
		+	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ljyA01 1Ljya01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ljyA02 1Ljya02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013781 Ipr013781], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001223 Ipr001223], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015821 Ipr015821], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001579 Ipr001579], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011583 Ipr011583]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00704 PF00704]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=84618 d1ljya1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=84619 d1ljya2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q8SPQ0 Q8SPQ0]</span>
	}}		}}

OCA: Protected "Template:STRUCTURE 1ljy" [edit=sysop:move=sysop]

OCA — Fri, 02 May 2008 20:59:33 GMT

Protected "Template:STRUCTURE 1ljy" [edit=sysop:move=sysop]

←Older revision

Revision as of 20:59, 2 May 2008

OCA: New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1ljy, resolution 2.90Å (initial scene) |SITE= |LIGAND= |SITE=
|LIGAND= <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>
|ACTIVITY=
|GENE=
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00704 Glyco_hydro_18], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00636 Glyco_18]</span>
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ljy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ljy OCA], [http://www.ebi.ac.uk/pdbsum/1ljy PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ljy RCSB]</span>
}}