Template:STRUCTURE 1lqb - Revision history

OCA at 12:08, 24 March 2013

OCA — Sun, 24 Mar 2013 12:08:21 GMT

←Older revision		Revision as of 12:08, 24 March 2013
Line 3:		Line 3:
	\|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>		\|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
	\|NONSTDRES=<scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene>		\|NONSTDRES=<scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene>
-	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lqb OCA], [http://www.~~ebi~~.~~ac.uk~~/~~pdbsum~~/1lqb ~~PDBsum~~], [http://www.~~rcsb~~.~~org~~/~~pdb~~/~~explore.do?structureId=~~1lqb ~~RCSB~~]</span>	+	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lqb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1lqb RCSB], [http://www.ebi.ac.uk/pdbsum/1lqb PDBsum]</span>
	\|FUNCTION={{GO\|id=GO:0005515 \| text = protein binding}}{{GO\|id=GO:0003711 \| text = transcription elongation regulator activity}}{{GO\|id=GO:0008134 \| text = transcription factor binding}}{{GO\|id=GO:0004871 \| text = signal transducer activity}}{{GO\|id=GO:0030528 \| text = transcription regulator activity}}{{GO\|id=GO:0035035 \| text = histone acetyltransferase binding}}{{GO\|id=GO:0003677 \| text = DNA binding}}{{GO\|id=GO:0003705 \| text = RNA polymerase II transcription factor activity, enhancer binding}}{{GO\|id=GO:0003700 \| text = transcription factor activity}}{{GO\|id=GO:0046982 \| text = protein heterodimerization activity}}		\|FUNCTION={{GO\|id=GO:0005515 \| text = protein binding}}{{GO\|id=GO:0003711 \| text = transcription elongation regulator activity}}{{GO\|id=GO:0008134 \| text = transcription factor binding}}{{GO\|id=GO:0004871 \| text = signal transducer activity}}{{GO\|id=GO:0030528 \| text = transcription regulator activity}}{{GO\|id=GO:0035035 \| text = histone acetyltransferase binding}}{{GO\|id=GO:0003677 \| text = DNA binding}}{{GO\|id=GO:0003705 \| text = RNA polymerase II transcription factor activity, enhancer binding}}{{GO\|id=GO:0003700 \| text = transcription factor activity}}{{GO\|id=GO:0046982 \| text = protein heterodimerization activity}}
	\|PROCESS={{GO\|id=GO:0006461 \| text = protein complex assembly}}{{GO\|id=GO:0006355 \| text = regulation of transcription, DNA-dependent}}{{GO\|id=GO:0006350 \| text = transcription}}{{GO\|id=GO:0006512 \| text = ubiquitin cycle}}{{GO\|id=GO:0006368 \| text = RNA elongation from RNA polymerase II promoter}}{{GO\|id=GO:0006464 \| text = protein modification process}}{{GO\|id=GO:0006357 \| text = regulation of transcription from RNA polymerase II promoter}}{{GO\|id=GO:0007049 \| text = cell cycle}}{{GO\|id=GO:0006916 \| text = anti-apoptosis}}{{GO\|id=GO:0008285 \| text = negative regulation of cell proliferation}}{{GO\|id=GO:0045597 \| text = positive regulation of cell differentiation}}{{GO\|id=GO:0016567 \| text = protein ubiquitination}}{{GO\|id=GO:0000122 \| text = negative regulation of transcription from RNA polymerase II promoter}}{{GO\|id=GO:0000902 \| text = cell morphogenesis}}{{GO\|id=GO:0006950 \| text = response to stress}}{{GO\|id=GO:0045786 \| text = negative regulation of cell cycle}}{{GO\|id=GO:0006508 \| text = proteolysis}}{{GO\|id=GO:0050821 \| text = protein stabilization}}{{GO\|id=GO:0042592 \| text = homeostatic process}}{{GO\|id=GO:0007165 \| text = signal transduction}}{{GO\|id=GO:0001666 \| text = response to hypoxia}}{{GO\|id=GO:0006351 \| text = transcription, DNA-dependent}}{{GO\|id=GO:0045941 \| text = positive regulation of transcription}}{{GO\|id=GO:0045449 \| text = regulation of transcription}}		\|PROCESS={{GO\|id=GO:0006461 \| text = protein complex assembly}}{{GO\|id=GO:0006355 \| text = regulation of transcription, DNA-dependent}}{{GO\|id=GO:0006350 \| text = transcription}}{{GO\|id=GO:0006512 \| text = ubiquitin cycle}}{{GO\|id=GO:0006368 \| text = RNA elongation from RNA polymerase II promoter}}{{GO\|id=GO:0006464 \| text = protein modification process}}{{GO\|id=GO:0006357 \| text = regulation of transcription from RNA polymerase II promoter}}{{GO\|id=GO:0007049 \| text = cell cycle}}{{GO\|id=GO:0006916 \| text = anti-apoptosis}}{{GO\|id=GO:0008285 \| text = negative regulation of cell proliferation}}{{GO\|id=GO:0045597 \| text = positive regulation of cell differentiation}}{{GO\|id=GO:0016567 \| text = protein ubiquitination}}{{GO\|id=GO:0000122 \| text = negative regulation of transcription from RNA polymerase II promoter}}{{GO\|id=GO:0000902 \| text = cell morphogenesis}}{{GO\|id=GO:0006950 \| text = response to stress}}{{GO\|id=GO:0045786 \| text = negative regulation of cell cycle}}{{GO\|id=GO:0006508 \| text = proteolysis}}{{GO\|id=GO:0050821 \| text = protein stabilization}}{{GO\|id=GO:0042592 \| text = homeostatic process}}{{GO\|id=GO:0007165 \| text = signal transduction}}{{GO\|id=GO:0001666 \| text = response to hypoxia}}{{GO\|id=GO:0006351 \| text = transcription, DNA-dependent}}{{GO\|id=GO:0045941 \| text = positive regulation of transcription}}{{GO\|id=GO:0045449 \| text = regulation of transcription}}

OCA at 04:57, 27 July 2012

OCA — Fri, 27 Jul 2012 04:57:57 GMT

←Older revision		Revision as of 04:57, 27 July 2012
Line 1:		Line 1:
	{{Structure		{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1lqb]], resolution 2.00Å (<scene name='initialview01'>default scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1lqb]], [[Resolution\|resolution]] 2.00Å (<scene name='initialview01'>default scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>		\|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
-	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01788 ElonginB], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01847 VHL], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00512 Skp1]</span>
	\|NONSTDRES=<scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene>		\|NONSTDRES=<scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene>
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lqb OCA], [http://www.ebi.ac.uk/pdbsum/1lqb PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1lqb RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lqb OCA], [http://www.ebi.ac.uk/pdbsum/1lqb PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1lqb RCSB]</span>
Line 9:		Line 8:
	\|COMPONENT={{GO\|id=GO:0005634 \| text = nucleus}}{{GO\|id=GO:0005737 \| text = cytoplasm}}{{GO\|id=GO:0016020 \| text = membrane}}{{GO\|id=GO:0005829 \| text = cytosol}}{{GO\|id=GO:0005739 \| text = mitochondrion}}{{GO\|id=GO:0005783 \| text = endoplasmic reticulum}}		\|COMPONENT={{GO\|id=GO:0005634 \| text = nucleus}}{{GO\|id=GO:0005737 \| text = cytoplasm}}{{GO\|id=GO:0016020 \| text = membrane}}{{GO\|id=GO:0005829 \| text = cytosol}}{{GO\|id=GO:0005739 \| text = mitochondrion}}{{GO\|id=GO:0005783 \| text = endoplasmic reticulum}}
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbA00 1Lqba00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbB00 1Lqbb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC01 1Lqbc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC02 1Lqbc02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000626 Ipr000626], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001232 Ipr001232], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011333 Ipr011333], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002714 Ipr002714], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011598 Ipr011598], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013655 Ipr013655], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000014 Ipr000014], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000700 Ipr000700], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001610 Ipr001610], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001321 Ipr001321], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014887 Ipr014887], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001092 Ipr001092]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03931 PF03931], [http://pfam.sanger.ac.uk/family?acc=PF01847 PF01847]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74184 d1lqba_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74185 d1lqbb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74186 d1lqbc_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15370 Q15370], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15369 Q15369], [http://ca.expasy.org/cgi-bin/niceprot.pl?P40337 P40337], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q16665 Q16665]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbA00 1Lqba00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbB00 1Lqbb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC01 1Lqbc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC02 1Lqbc02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000626 Ipr000626], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001232 Ipr001232], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011333 Ipr011333], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002714 Ipr002714], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011598 Ipr011598], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013655 Ipr013655], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000014 Ipr000014], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000700 Ipr000700], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001610 Ipr001610], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001321 Ipr001321], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014887 Ipr014887], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001092 Ipr001092]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03931 PF03931], [http://pfam.sanger.ac.uk/family?acc=PF01847 PF01847]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74184 d1lqba_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74185 d1lqbb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74186 d1lqbc_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15370 Q15370], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15369 Q15369], [http://ca.expasy.org/cgi-bin/niceprot.pl?P40337 P40337], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q16665 Q16665]</span>
-	\|~~FARESOURCES~~=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=TCEB2 TCEB2], [http://www.genecards.org/cgi-bin/carddisp.pl?id=TCEB1 TCEB1], [http://www.genecards.org/cgi-bin/carddisp.pl?id=VHL VHL]</span>	+	\|uPDB=1LQB\|CONSURF={{!}}-
-	\|CONSURF={{!}}-	+
	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]		{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"		{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

OCA at 19:17, 17 February 2009

OCA — Tue, 17 Feb 2009 19:17:55 GMT

←Older revision		Revision as of 19:17, 17 February 2009
Line 1:		Line 1:
-	{{~~StructureD~~	+	{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1lqb, resolution 2.00Å (<scene name='initialview01'>~~initial~~ scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1lqb]], resolution 2.00Å (<scene name='initialview01'>default scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>		\|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01788 ElonginB], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01847 VHL], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00512 Skp1]</span>		\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01788 ElonginB], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01847 VHL], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00512 Skp1]</span>
Line 10:		Line 10:
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbA00 1Lqba00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbB00 1Lqbb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC01 1Lqbc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC02 1Lqbc02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000626 Ipr000626], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001232 Ipr001232], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011333 Ipr011333], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002714 Ipr002714], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011598 Ipr011598], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013655 Ipr013655], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000014 Ipr000014], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000700 Ipr000700], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001610 Ipr001610], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001321 Ipr001321], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014887 Ipr014887], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001092 Ipr001092]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03931 PF03931], [http://pfam.sanger.ac.uk/family?acc=PF01847 PF01847]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74184 d1lqba_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74185 d1lqbb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74186 d1lqbc_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15370 Q15370], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15369 Q15369], [http://ca.expasy.org/cgi-bin/niceprot.pl?P40337 P40337], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q16665 Q16665]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbA00 1Lqba00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbB00 1Lqbb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC01 1Lqbc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC02 1Lqbc02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000626 Ipr000626], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001232 Ipr001232], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011333 Ipr011333], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002714 Ipr002714], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011598 Ipr011598], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013655 Ipr013655], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000014 Ipr000014], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000700 Ipr000700], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001610 Ipr001610], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001321 Ipr001321], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014887 Ipr014887], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001092 Ipr001092]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03931 PF03931], [http://pfam.sanger.ac.uk/family?acc=PF01847 PF01847]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74184 d1lqba_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74185 d1lqbb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74186 d1lqbc_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15370 Q15370], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15369 Q15369], [http://ca.expasy.org/cgi-bin/niceprot.pl?P40337 P40337], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q16665 Q16665]</span>
	\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=TCEB2 TCEB2], [http://www.genecards.org/cgi-bin/carddisp.pl?id=TCEB1 TCEB1], [http://www.genecards.org/cgi-bin/carddisp.pl?id=VHL VHL]</span>		\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=TCEB2 TCEB2], [http://www.genecards.org/cgi-bin/carddisp.pl?id=TCEB1 TCEB1], [http://www.genecards.org/cgi-bin/carddisp.pl?id=VHL VHL]</span>
		+	\|CONSURF={{!}}-
		+	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
		+	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
		+	{{!}} '''Toggle Conservation Colors:'''
		+	{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
		+	Rows = identical sequences:
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>A [x]</text>
		+	<name>jmb_1lqb_A</name>
		+	<title>toggle chain A</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>B [x]</text>
		+	<name>jmb_1lqb_B</name>
		+	<title>toggle chain B</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>C [x]</text>
		+	<name>jmb_1lqb_C</name>
		+	<title>toggle chain C</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>D [x]</text>
		+	<name>jmb_1lqb_D</name>
		+	<title>toggle chain D</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+
	}}		}}

OCA at 18:46, 2 July 2008

OCA — Wed, 02 Jul 2008 18:46:45 GMT

←Older revision		Revision as of 18:46, 2 July 2008
Line 9:		Line 9:
	\|COMPONENT={{GO\|id=GO:0005634 \| text = nucleus}}{{GO\|id=GO:0005737 \| text = cytoplasm}}{{GO\|id=GO:0016020 \| text = membrane}}{{GO\|id=GO:0005829 \| text = cytosol}}{{GO\|id=GO:0005739 \| text = mitochondrion}}{{GO\|id=GO:0005783 \| text = endoplasmic reticulum}}		\|COMPONENT={{GO\|id=GO:0005634 \| text = nucleus}}{{GO\|id=GO:0005737 \| text = cytoplasm}}{{GO\|id=GO:0016020 \| text = membrane}}{{GO\|id=GO:0005829 \| text = cytosol}}{{GO\|id=GO:0005739 \| text = mitochondrion}}{{GO\|id=GO:0005783 \| text = endoplasmic reticulum}}
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbA00 1Lqba00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbB00 1Lqbb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC01 1Lqbc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC02 1Lqbc02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000626 Ipr000626], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001232 Ipr001232], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011333 Ipr011333], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002714 Ipr002714], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011598 Ipr011598], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013655 Ipr013655], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000014 Ipr000014], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000700 Ipr000700], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001610 Ipr001610], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001321 Ipr001321], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014887 Ipr014887], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001092 Ipr001092]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03931 PF03931], [http://pfam.sanger.ac.uk/family?acc=PF01847 PF01847]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74184 d1lqba_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74185 d1lqbb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74186 d1lqbc_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15370 Q15370], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15369 Q15369], [http://ca.expasy.org/cgi-bin/niceprot.pl?P40337 P40337], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q16665 Q16665]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbA00 1Lqba00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbB00 1Lqbb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC01 1Lqbc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC02 1Lqbc02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000626 Ipr000626], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001232 Ipr001232], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011333 Ipr011333], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002714 Ipr002714], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011598 Ipr011598], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013655 Ipr013655], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000014 Ipr000014], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000700 Ipr000700], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001610 Ipr001610], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001321 Ipr001321], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014887 Ipr014887], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001092 Ipr001092]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03931 PF03931], [http://pfam.sanger.ac.uk/family?acc=PF01847 PF01847]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74184 d1lqba_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74185 d1lqbb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74186 d1lqbc_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15370 Q15370], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15369 Q15369], [http://ca.expasy.org/cgi-bin/niceprot.pl?P40337 P40337], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q16665 Q16665]</span>
-	\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=~~Q15370 Q15370~~], [http://www.genecards.org/cgi-bin/carddisp.pl?id=~~Q15369 Q15369~~], [http://www.genecards.org/cgi-bin/carddisp.pl?id=~~P40337 P40337~~]</span>	+	\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=TCEB2 TCEB2], [http://www.genecards.org/cgi-bin/carddisp.pl?id=TCEB1 TCEB1], [http://www.genecards.org/cgi-bin/carddisp.pl?id=VHL VHL]</span>
	}}		}}

OCA at 13:34, 18 June 2008

OCA — Wed, 18 Jun 2008 13:34:09 GMT

←Older revision		Revision as of 13:34, 18 June 2008
Line 1:		Line 1:
-	{{~~Structure~~	+	{{StructureD
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE=350\|CAPTION= 1lqb, resolution 2.00Å (<scene name='initialview01'>initial scene</scene>)	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1lqb, resolution 2.00Å (<scene name='initialview01'>initial scene</scene>)}}}
-	~~\|SITE=~~	+	\|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
-	\|LIGAND= ~~<scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene>,~~ <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>	+
-	~~\|ACTIVITY=~~	+
-	~~\|GENE=~~	+
	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01788 ElonginB], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01847 VHL], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00512 Skp1]</span>		\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01788 ElonginB], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01847 VHL], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00512 Skp1]</span>
-	\|~~RELATEDENTRY~~=	+	\|NONSTDRES=<scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene>
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lqb OCA], [http://www.ebi.ac.uk/pdbsum/1lqb PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1lqb RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lqb OCA], [http://www.ebi.ac.uk/pdbsum/1lqb PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1lqb RCSB]</span>
		+	\|FUNCTION={{GO\|id=GO:0005515 \| text = protein binding}}{{GO\|id=GO:0003711 \| text = transcription elongation regulator activity}}{{GO\|id=GO:0008134 \| text = transcription factor binding}}{{GO\|id=GO:0004871 \| text = signal transducer activity}}{{GO\|id=GO:0030528 \| text = transcription regulator activity}}{{GO\|id=GO:0035035 \| text = histone acetyltransferase binding}}{{GO\|id=GO:0003677 \| text = DNA binding}}{{GO\|id=GO:0003705 \| text = RNA polymerase II transcription factor activity, enhancer binding}}{{GO\|id=GO:0003700 \| text = transcription factor activity}}{{GO\|id=GO:0046982 \| text = protein heterodimerization activity}}
		+	\|PROCESS={{GO\|id=GO:0006461 \| text = protein complex assembly}}{{GO\|id=GO:0006355 \| text = regulation of transcription, DNA-dependent}}{{GO\|id=GO:0006350 \| text = transcription}}{{GO\|id=GO:0006512 \| text = ubiquitin cycle}}{{GO\|id=GO:0006368 \| text = RNA elongation from RNA polymerase II promoter}}{{GO\|id=GO:0006464 \| text = protein modification process}}{{GO\|id=GO:0006357 \| text = regulation of transcription from RNA polymerase II promoter}}{{GO\|id=GO:0007049 \| text = cell cycle}}{{GO\|id=GO:0006916 \| text = anti-apoptosis}}{{GO\|id=GO:0008285 \| text = negative regulation of cell proliferation}}{{GO\|id=GO:0045597 \| text = positive regulation of cell differentiation}}{{GO\|id=GO:0016567 \| text = protein ubiquitination}}{{GO\|id=GO:0000122 \| text = negative regulation of transcription from RNA polymerase II promoter}}{{GO\|id=GO:0000902 \| text = cell morphogenesis}}{{GO\|id=GO:0006950 \| text = response to stress}}{{GO\|id=GO:0045786 \| text = negative regulation of cell cycle}}{{GO\|id=GO:0006508 \| text = proteolysis}}{{GO\|id=GO:0050821 \| text = protein stabilization}}{{GO\|id=GO:0042592 \| text = homeostatic process}}{{GO\|id=GO:0007165 \| text = signal transduction}}{{GO\|id=GO:0001666 \| text = response to hypoxia}}{{GO\|id=GO:0006351 \| text = transcription, DNA-dependent}}{{GO\|id=GO:0045941 \| text = positive regulation of transcription}}{{GO\|id=GO:0045449 \| text = regulation of transcription}}
		+	\|COMPONENT={{GO\|id=GO:0005634 \| text = nucleus}}{{GO\|id=GO:0005737 \| text = cytoplasm}}{{GO\|id=GO:0016020 \| text = membrane}}{{GO\|id=GO:0005829 \| text = cytosol}}{{GO\|id=GO:0005739 \| text = mitochondrion}}{{GO\|id=GO:0005783 \| text = endoplasmic reticulum}}
		+	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbA00 1Lqba00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbB00 1Lqbb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC01 1Lqbc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1lqbC02 1Lqbc02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000626 Ipr000626], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001232 Ipr001232], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011333 Ipr011333], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002714 Ipr002714], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011598 Ipr011598], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013655 Ipr013655], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000014 Ipr000014], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000700 Ipr000700], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001610 Ipr001610], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001321 Ipr001321], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014887 Ipr014887], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001092 Ipr001092]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03931 PF03931], [http://pfam.sanger.ac.uk/family?acc=PF01847 PF01847]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74184 d1lqba_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74185 d1lqbb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=74186 d1lqbc_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15370 Q15370], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q15369 Q15369], [http://ca.expasy.org/cgi-bin/niceprot.pl?P40337 P40337], [http://ca.expasy.org/cgi-bin/niceprot.pl?Q16665 Q16665]</span>
		+	\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=Q15370 Q15370], [http://www.genecards.org/cgi-bin/carddisp.pl?id=Q15369 Q15369], [http://www.genecards.org/cgi-bin/carddisp.pl?id=P40337 P40337]</span>
	}}		}}

OCA: Protected "Template:STRUCTURE 1lqb" [edit=sysop:move=sysop]

OCA — Fri, 02 May 2008 21:10:19 GMT

Protected "Template:STRUCTURE 1lqb" [edit=sysop:move=sysop]

←Older revision

Revision as of 21:10, 2 May 2008

OCA: New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1lqb, resolution 2.00Å (initial scene) |SITE= |LIGAND= |SITE=
|LIGAND= <scene name='pdbligand=HYP:4-HYDROXYPROLINE'>HYP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
|ACTIVITY=
|GENE=
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01788 ElonginB], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01847 VHL], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00512 Skp1]</span>
|RELATEDENTRY=
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lqb OCA], [http://www.ebi.ac.uk/pdbsum/1lqb PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1lqb RCSB]</span>
}}