Template:STRUCTURE 1opl - Revision history

OCA at 20:26, 24 March 2013

OCA — Sun, 24 Mar 2013 20:26:44 GMT

←Older revision		Revision as of 20:26, 24 March 2013
Line 5:		Line 5:
	\|GENE= Abl ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])		\|GENE= Abl ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
	\|RELATEDENTRY=[[1opj\|1opj]], [[1opk\|1opk]]		\|RELATEDENTRY=[[1opj\|1opj]], [[1opk\|1opk]]
-	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1opl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1opl OCA], [http://www.~~ebi~~.~~ac.uk~~/~~pdbsum~~/1opl ~~PDBsum~~], [http://www.~~rcsb~~.~~org~~/~~pdb~~/~~explore.do?structureId=~~1opl ~~RCSB~~]</span>	+	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1opl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1opl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1opl RCSB], [http://www.ebi.ac.uk/pdbsum/1opl PDBsum]</span>
	\|FUNCTION={{GO\|id=GO:0016740 \| text = transferase activity}}{{GO\|id=GO:0008022 \| text = protein C-terminus binding}}{{GO\|id=GO:0000166 \| text = nucleotide binding}}{{GO\|id=GO:0016301 \| text = kinase activity}}{{GO\|id=GO:0046872 \| text = metal ion binding}}{{GO\|id=GO:0030145 \| text = manganese ion binding}}{{GO\|id=GO:0000287 \| text = magnesium ion binding}}{{GO\|id=GO:0004672 \| text = protein kinase activity}}{{GO\|id=GO:0005524 \| text = ATP binding}}{{GO\|id=GO:0004713 \| text = protein-tyrosine kinase activity}}{{GO\|id=GO:0003677 \| text = DNA binding}}{{GO\|id=GO:0005515 \| text = protein binding}}		\|FUNCTION={{GO\|id=GO:0016740 \| text = transferase activity}}{{GO\|id=GO:0008022 \| text = protein C-terminus binding}}{{GO\|id=GO:0000166 \| text = nucleotide binding}}{{GO\|id=GO:0016301 \| text = kinase activity}}{{GO\|id=GO:0046872 \| text = metal ion binding}}{{GO\|id=GO:0030145 \| text = manganese ion binding}}{{GO\|id=GO:0000287 \| text = magnesium ion binding}}{{GO\|id=GO:0004672 \| text = protein kinase activity}}{{GO\|id=GO:0005524 \| text = ATP binding}}{{GO\|id=GO:0004713 \| text = protein-tyrosine kinase activity}}{{GO\|id=GO:0003677 \| text = DNA binding}}{{GO\|id=GO:0005515 \| text = protein binding}}
	\|PROCESS={{GO\|id=GO:0006468 \| text = protein amino acid phosphorylation}}{{GO\|id=GO:0008630 \| text = DNA damage response, signal transduction resulting in induction of apoptosis}}{{GO\|id=GO:0007242 \| text = intracellular signaling cascade}}{{GO\|id=GO:0000115 \| text = S-phase-specific transcription in mitotic cell cycle}}{{GO\|id=GO:0007155 \| text = cell adhesion}}{{GO\|id=GO:0030036 \| text = actin cytoskeleton organization and biogenesis}}{{GO\|id=GO:0006298 \| text = mismatch repair}}{{GO\|id=GO:0006355 \| text = regulation of transcription, DNA-dependent}}{{GO\|id=GO:0018108 \| text = peptidyl-tyrosine phosphorylation}}{{GO\|id=GO:0006464 \| text = protein modification process}}		\|PROCESS={{GO\|id=GO:0006468 \| text = protein amino acid phosphorylation}}{{GO\|id=GO:0008630 \| text = DNA damage response, signal transduction resulting in induction of apoptosis}}{{GO\|id=GO:0007242 \| text = intracellular signaling cascade}}{{GO\|id=GO:0000115 \| text = S-phase-specific transcription in mitotic cell cycle}}{{GO\|id=GO:0007155 \| text = cell adhesion}}{{GO\|id=GO:0030036 \| text = actin cytoskeleton organization and biogenesis}}{{GO\|id=GO:0006298 \| text = mismatch repair}}{{GO\|id=GO:0006355 \| text = regulation of transcription, DNA-dependent}}{{GO\|id=GO:0018108 \| text = peptidyl-tyrosine phosphorylation}}{{GO\|id=GO:0006464 \| text = protein modification process}}

OCA at 08:23, 27 July 2012

OCA — Fri, 27 Jul 2012 08:23:00 GMT

←Older revision		Revision as of 08:23, 27 July 2012
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	{{Structure		{{Structure
	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1opl]], [[Resolution\|resolution]] 3.42Å (<scene name='initialview01'>default scene</scene>)}}}		\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1opl]], [[Resolution\|resolution]] 3.42Å (<scene name='initialview01'>default scene</scene>)}}}
-	\|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Myr+A+538'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+P16+A+539'>AC2</scene> and <scene name='pdbsite=AC3:Binding+Site+For+Residue+P16+B+538'>AC3</scene>
	\|LIGAND= <scene name='pdbligand=MYR:MYRISTIC+ACID'>MYR</scene>, <scene name='pdbligand=P16:6-(2,6-DICHLOROPHENYL)-2-{[3-(HYDROXYMETHYL)PHENYL]AMINO}-8-METHYLPYRIDO[2,3-D]PYRIMIDIN-7(8H)-ONE'>P16</scene>		\|LIGAND= <scene name='pdbligand=MYR:MYRISTIC+ACID'>MYR</scene>, <scene name='pdbligand=P16:6-(2,6-DICHLOROPHENYL)-2-{[3-(HYDROXYMETHYL)PHENYL]AMINO}-8-METHYLPYRIDO[2,3-D]PYRIMIDIN-7(8H)-ONE'>P16</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Transferase Transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.1 and 2.7.10.2 2.7.10.1 and 2.7.10.2] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Transferase Transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.1 and 2.7.10.2 2.7.10.1 and 2.7.10.2] </span>
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	\|COMPONENT={{GO\|id=GO:0005856 \| text = cytoskeleton}}{{GO\|id=GO:0005737 \| text = cytoplasm}}{{GO\|id=GO:0005634 \| text = nucleus}}		\|COMPONENT={{GO\|id=GO:0005856 \| text = cytoskeleton}}{{GO\|id=GO:0005737 \| text = cytoplasm}}{{GO\|id=GO:0005634 \| text = nucleus}}
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA04 1Opla04], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA03 1Opla03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA02 1Opla02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA01 1Opla01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011009 Ipr011009], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008266 Ipr008266], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015015 Ipr015015], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001245 Ipr001245], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000980 Ipr000980], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000719 Ipr000719], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001452 Ipr001452]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF07714 PF07714], [http://pfam.sanger.ac.uk/family?acc=PF00018 PF00018], [http://pfam.sanger.ac.uk/family?acc=PF00017 PF00017]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87237 d1opla3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87236 d1opla2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87235 d1opla1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87238 d1oplb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87239 d1oplb2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00519 P00519]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA04 1Opla04], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA03 1Opla03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA02 1Opla02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA01 1Opla01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011009 Ipr011009], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008266 Ipr008266], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015015 Ipr015015], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001245 Ipr001245], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000980 Ipr000980], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000719 Ipr000719], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001452 Ipr001452]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF07714 PF07714], [http://pfam.sanger.ac.uk/family?acc=PF00018 PF00018], [http://pfam.sanger.ac.uk/family?acc=PF00017 PF00017]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87237 d1opla3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87236 d1opla2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87235 d1opla1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87238 d1oplb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87239 d1oplb2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00519 P00519]</span>
-	\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=ABL1 ABL1]</span>
	\|uPDB=1OPL\|CONSURF={{!}}-		\|uPDB=1OPL\|CONSURF={{!}}-
	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]		{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]

OCA at 20:40, 20 January 2010

OCA — Wed, 20 Jan 2010 20:40:09 GMT

←Older revision		Revision as of 20:40, 20 January 2010
Line 1:		Line 1:
	{{Structure		{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1opl]], resolution 3.42Å (<scene name='initialview01'>default scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1opl]], [[Resolution\|resolution]] 3.42Å (<scene name='initialview01'>default scene</scene>)}}}
		+	\|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Myr+A+538'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+P16+A+539'>AC2</scene> and <scene name='pdbsite=AC3:Binding+Site+For+Residue+P16+B+538'>AC3</scene>
	\|LIGAND= <scene name='pdbligand=MYR:MYRISTIC+ACID'>MYR</scene>, <scene name='pdbligand=P16:6-(2,6-DICHLOROPHENYL)-2-{[3-(HYDROXYMETHYL)PHENYL]AMINO}-8-METHYLPYRIDO[2,3-D]PYRIMIDIN-7(8H)-ONE'>P16</scene>		\|LIGAND= <scene name='pdbligand=MYR:MYRISTIC+ACID'>MYR</scene>, <scene name='pdbligand=P16:6-(2,6-DICHLOROPHENYL)-2-{[3-(HYDROXYMETHYL)PHENYL]AMINO}-8-METHYLPYRIDO[2,3-D]PYRIMIDIN-7(8H)-ONE'>P16</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Transferase Transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.1 and 2.7.10.2 2.7.10.1 and 2.7.10.2] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Transferase Transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.1 and 2.7.10.2 2.7.10.1 and 2.7.10.2] </span>
	\|GENE= Abl ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])		\|GENE= Abl ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
-	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd05052 PTKc_Abl], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00173 SH2], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00220 S_TKc], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00174 SH3]</span>
	\|RELATEDENTRY=[[1opj\|1opj]], [[1opk\|1opk]]		\|RELATEDENTRY=[[1opj\|1opj]], [[1opk\|1opk]]
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1opl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1opl OCA], [http://www.ebi.ac.uk/pdbsum/1opl PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1opl RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1opl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1opl OCA], [http://www.ebi.ac.uk/pdbsum/1opl PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1opl RCSB]</span>
Line 12:		Line 12:
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA04 1Opla04], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA03 1Opla03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA02 1Opla02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA01 1Opla01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011009 Ipr011009], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008266 Ipr008266], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015015 Ipr015015], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001245 Ipr001245], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000980 Ipr000980], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000719 Ipr000719], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001452 Ipr001452]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF07714 PF07714], [http://pfam.sanger.ac.uk/family?acc=PF00018 PF00018], [http://pfam.sanger.ac.uk/family?acc=PF00017 PF00017]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87237 d1opla3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87236 d1opla2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87235 d1opla1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87238 d1oplb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87239 d1oplb2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00519 P00519]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA04 1Opla04], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA03 1Opla03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA02 1Opla02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA01 1Opla01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011009 Ipr011009], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008266 Ipr008266], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015015 Ipr015015], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001245 Ipr001245], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000980 Ipr000980], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000719 Ipr000719], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001452 Ipr001452]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF07714 PF07714], [http://pfam.sanger.ac.uk/family?acc=PF00018 PF00018], [http://pfam.sanger.ac.uk/family?acc=PF00017 PF00017]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87237 d1opla3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87236 d1opla2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87235 d1opla1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87238 d1oplb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87239 d1oplb2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00519 P00519]</span>
	\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=ABL1 ABL1]</span>		\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=ABL1 ABL1]</span>
-	\|CONSURF={{!}}-	+	\|uPDB=1OPL\|CONSURF={{!}}-
	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]		{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"		{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

OCA at 22:58, 17 February 2009

OCA — Tue, 17 Feb 2009 22:58:46 GMT

←Older revision		Revision as of 22:58, 17 February 2009
Line 1:		Line 1:
-	{{~~StructureD~~	+	{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1opl, resolution 3.42Å (<scene name='initialview01'>~~initial~~ scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1opl]], resolution 3.42Å (<scene name='initialview01'>default scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=MYR:MYRISTIC+ACID'>MYR</scene>, <scene name='pdbligand=P16:6-(2,6-DICHLOROPHENYL)-2-{[3-(HYDROXYMETHYL)PHENYL]AMINO}-8-METHYLPYRIDO[2,3-D]PYRIMIDIN-7(8H)-ONE'>P16</scene>		\|LIGAND= <scene name='pdbligand=MYR:MYRISTIC+ACID'>MYR</scene>, <scene name='pdbligand=P16:6-(2,6-DICHLOROPHENYL)-2-{[3-(HYDROXYMETHYL)PHENYL]AMINO}-8-METHYLPYRIDO[2,3-D]PYRIMIDIN-7(8H)-ONE'>P16</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Transferase Transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.1 and 2.7.10.2 2.7.10.1 and 2.7.10.2] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Transferase Transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.1 and 2.7.10.2 2.7.10.1 and 2.7.10.2] </span>
Line 12:		Line 12:
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA04 1Opla04], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA03 1Opla03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA02 1Opla02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA01 1Opla01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011009 Ipr011009], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008266 Ipr008266], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015015 Ipr015015], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001245 Ipr001245], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000980 Ipr000980], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000719 Ipr000719], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001452 Ipr001452]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF07714 PF07714], [http://pfam.sanger.ac.uk/family?acc=PF00018 PF00018], [http://pfam.sanger.ac.uk/family?acc=PF00017 PF00017]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87237 d1opla3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87236 d1opla2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87235 d1opla1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87238 d1oplb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87239 d1oplb2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00519 P00519]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA04 1Opla04], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA03 1Opla03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA02 1Opla02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA01 1Opla01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011009 Ipr011009], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008266 Ipr008266], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015015 Ipr015015], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001245 Ipr001245], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000980 Ipr000980], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000719 Ipr000719], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001452 Ipr001452]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF07714 PF07714], [http://pfam.sanger.ac.uk/family?acc=PF00018 PF00018], [http://pfam.sanger.ac.uk/family?acc=PF00017 PF00017]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87237 d1opla3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87236 d1opla2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87235 d1opla1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87238 d1oplb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87239 d1oplb2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00519 P00519]</span>
	\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=ABL1 ABL1]</span>		\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=ABL1 ABL1]</span>
		+	\|CONSURF={{!}}-
		+	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
		+	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
		+	{{!}} '''Toggle Conservation Colors:'''
		+	{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
		+	Rows = identical sequences:
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>A [x]</text>
		+	<name>jmb_1opl_A</name>
		+	<title>toggle chain A</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>B [x]</text>
		+	<name>jmb_1opl_B</name>
		+	<title>toggle chain B</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+
	}}		}}

OCA at 14:47, 26 June 2008

OCA — Thu, 26 Jun 2008 14:47:54 GMT

←Older revision		Revision as of 14:47, 26 June 2008
Line 11:		Line 11:
	\|COMPONENT={{GO\|id=GO:0005856 \| text = cytoskeleton}}{{GO\|id=GO:0005737 \| text = cytoplasm}}{{GO\|id=GO:0005634 \| text = nucleus}}		\|COMPONENT={{GO\|id=GO:0005856 \| text = cytoskeleton}}{{GO\|id=GO:0005737 \| text = cytoplasm}}{{GO\|id=GO:0005634 \| text = nucleus}}
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA04 1Opla04], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA03 1Opla03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA02 1Opla02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA01 1Opla01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011009 Ipr011009], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008266 Ipr008266], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015015 Ipr015015], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001245 Ipr001245], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000980 Ipr000980], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000719 Ipr000719], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001452 Ipr001452]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF07714 PF07714], [http://pfam.sanger.ac.uk/family?acc=PF00018 PF00018], [http://pfam.sanger.ac.uk/family?acc=PF00017 PF00017]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87237 d1opla3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87236 d1opla2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87235 d1opla1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87238 d1oplb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87239 d1oplb2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00519 P00519]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA04 1Opla04], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA03 1Opla03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA02 1Opla02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA01 1Opla01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011009 Ipr011009], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008266 Ipr008266], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015015 Ipr015015], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001245 Ipr001245], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000980 Ipr000980], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000719 Ipr000719], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001452 Ipr001452]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF07714 PF07714], [http://pfam.sanger.ac.uk/family?acc=PF00018 PF00018], [http://pfam.sanger.ac.uk/family?acc=PF00017 PF00017]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87237 d1opla3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87236 d1opla2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87235 d1opla1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87238 d1oplb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87239 d1oplb2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00519 P00519]</span>
-	\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=~~P00519 P00519~~]</span>	+	\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=ABL1 ABL1]</span>
	}}		}}

OCA at 14:11, 18 June 2008

OCA — Wed, 18 Jun 2008 14:11:18 GMT

←Older revision		Revision as of 14:11, 18 June 2008
Line 1:		Line 1:
-	{{~~Structure~~	+	{{StructureD
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE=350\|CAPTION= 1opl, resolution 3.42Å (<scene name='initialview01'>initial scene</scene>)	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1opl, resolution 3.42Å (<scene name='initialview01'>initial scene</scene>)}}}
-	~~\|SITE=~~	+
	\|LIGAND= <scene name='pdbligand=MYR:MYRISTIC+ACID'>MYR</scene>, <scene name='pdbligand=P16:6-(2,6-DICHLOROPHENYL)-2-{[3-(HYDROXYMETHYL)PHENYL]AMINO}-8-METHYLPYRIDO[2,3-D]PYRIMIDIN-7(8H)-ONE'>P16</scene>		\|LIGAND= <scene name='pdbligand=MYR:MYRISTIC+ACID'>MYR</scene>, <scene name='pdbligand=P16:6-(2,6-DICHLOROPHENYL)-2-{[3-(HYDROXYMETHYL)PHENYL]AMINO}-8-METHYLPYRIDO[2,3-D]PYRIMIDIN-7(8H)-ONE'>P16</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Transferase Transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.1 and 2.7.10.2 2.7.10.1 and 2.7.10.2] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Transferase Transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.1 and 2.7.10.2 2.7.10.1 and 2.7.10.2] </span>
Line 8:		Line 7:
	\|RELATEDENTRY=[[1opj\|1opj]], [[1opk\|1opk]]		\|RELATEDENTRY=[[1opj\|1opj]], [[1opk\|1opk]]
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1opl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1opl OCA], [http://www.ebi.ac.uk/pdbsum/1opl PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1opl RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1opl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1opl OCA], [http://www.ebi.ac.uk/pdbsum/1opl PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1opl RCSB]</span>
		+	\|FUNCTION={{GO\|id=GO:0016740 \| text = transferase activity}}{{GO\|id=GO:0008022 \| text = protein C-terminus binding}}{{GO\|id=GO:0000166 \| text = nucleotide binding}}{{GO\|id=GO:0016301 \| text = kinase activity}}{{GO\|id=GO:0046872 \| text = metal ion binding}}{{GO\|id=GO:0030145 \| text = manganese ion binding}}{{GO\|id=GO:0000287 \| text = magnesium ion binding}}{{GO\|id=GO:0004672 \| text = protein kinase activity}}{{GO\|id=GO:0005524 \| text = ATP binding}}{{GO\|id=GO:0004713 \| text = protein-tyrosine kinase activity}}{{GO\|id=GO:0003677 \| text = DNA binding}}{{GO\|id=GO:0005515 \| text = protein binding}}
		+	\|PROCESS={{GO\|id=GO:0006468 \| text = protein amino acid phosphorylation}}{{GO\|id=GO:0008630 \| text = DNA damage response, signal transduction resulting in induction of apoptosis}}{{GO\|id=GO:0007242 \| text = intracellular signaling cascade}}{{GO\|id=GO:0000115 \| text = S-phase-specific transcription in mitotic cell cycle}}{{GO\|id=GO:0007155 \| text = cell adhesion}}{{GO\|id=GO:0030036 \| text = actin cytoskeleton organization and biogenesis}}{{GO\|id=GO:0006298 \| text = mismatch repair}}{{GO\|id=GO:0006355 \| text = regulation of transcription, DNA-dependent}}{{GO\|id=GO:0018108 \| text = peptidyl-tyrosine phosphorylation}}{{GO\|id=GO:0006464 \| text = protein modification process}}
		+	\|COMPONENT={{GO\|id=GO:0005856 \| text = cytoskeleton}}{{GO\|id=GO:0005737 \| text = cytoplasm}}{{GO\|id=GO:0005634 \| text = nucleus}}
		+	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA04 1Opla04], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA03 1Opla03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA02 1Opla02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1oplA01 1Opla01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011009 Ipr011009], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008266 Ipr008266], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015015 Ipr015015], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001245 Ipr001245], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000980 Ipr000980], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000719 Ipr000719], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001452 Ipr001452]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF07714 PF07714], [http://pfam.sanger.ac.uk/family?acc=PF00018 PF00018], [http://pfam.sanger.ac.uk/family?acc=PF00017 PF00017]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87237 d1opla3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87236 d1opla2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87235 d1opla1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87238 d1oplb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=87239 d1oplb2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00519 P00519]</span>
		+	\|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=P00519 P00519]</span>
	}}		}}

OCA: Protected "Template:STRUCTURE 1opl" [edit=sysop:move=sysop]

OCA — Sat, 03 May 2008 01:08:03 GMT

Protected "Template:STRUCTURE 1opl" [edit=sysop:move=sysop]

←Older revision

Revision as of 01:08, 3 May 2008

OCA: New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1opl, resolution 3.42Å (initial scene) |SITE= |LIGAND= |SITE=
|LIGAND= <scene name='pdbligand=MYR:MYRISTIC+ACID'>MYR</scene>, <scene name='pdbligand=P16:6-(2,6-DICHLOROPHENYL)-2-{[3-(HYDROXYMETHYL)PHENYL]AMINO}-8-METHYLPYRIDO[2,3-D]PYRIMIDIN-7(8H)-ONE'>P16</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/Transferase Transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.1 and 2.7.10.2 2.7.10.1 and 2.7.10.2] 
|GENE= Abl ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
|DOMAIN=[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd05052 PTKc_Abl], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00173 SH2], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00220 S_TKc], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00174 SH3]
|RELATEDENTRY=[[1opj|1opj]], [[1opk|1opk]]
|RESOURCES=[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1opl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1opl OCA], [http://www.ebi.ac.uk/pdbsum/1opl PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1opl RCSB]
}}