Template:STRUCTURE 1pfk - Revision history

OCA at 13:35, 27 July 2012

OCA — Fri, 27 Jul 2012 13:35:15 GMT

OCA at 04:59, 18 February 2009

OCA — Wed, 18 Feb 2009 04:59:34 GMT

←Older revision		Revision as of 04:59, 18 February 2009
Line 1:		Line 1:
-	{{~~StructureD~~	+	{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1pfk, resolution 2.40Å (<scene name='initialview01'>~~initial~~ scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1pfk]], resolution 2.40Å (<scene name='initialview01'>default scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=FBP:SUGAR+(FRUCTOSE-1,6-DIPHOSPHATE)'>FBP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>		\|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=FBP:SUGAR+(FRUCTOSE-1,6-DIPHOSPHATE)'>FBP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/6-phosphofructokinase 6-phosphofructokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.11 2.7.1.11] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/6-phosphofructokinase 6-phosphofructokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.11 2.7.1.11] </span>
Line 9:		Line 9:
	\|COMPONENT={{GO\|id=GO:0005945 \| text = 6-phosphofructokinase complex}}{{GO\|id=GO:0005737 \| text = cytoplasm}}		\|COMPONENT={{GO\|id=GO:0005945 \| text = 6-phosphofructokinase complex}}{{GO\|id=GO:0005737 \| text = cytoplasm}}
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkA01 1Pfka01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkA02 1Pfka02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkB02 1Pfkb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkB01 1Pfkb01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015913 Ipr015913], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015912 Ipr015912], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012828 Ipr012828], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012003 Ipr012003], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000023 Ipr000023]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00365 PF00365]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35575 d1pfka_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35576 d1pfkb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0A796 P0A796]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkA01 1Pfka01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkA02 1Pfka02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkB02 1Pfkb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkB01 1Pfkb01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015913 Ipr015913], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015912 Ipr015912], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012828 Ipr012828], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012003 Ipr012003], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000023 Ipr000023]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00365 PF00365]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35575 d1pfka_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35576 d1pfkb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0A796 P0A796]</span>
		+	\|CONSURF={{!}}-
		+	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
		+	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
		+	{{!}} '''Toggle Conservation Colors:'''
		+	{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
		+	Rows = identical sequences:
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>A [x]</text>
		+	<name>jmb_1pfk_A</name>
		+	<title>toggle chain A</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>C [x]</text>
		+	<name>jmb_1pfk_C</name>
		+	<title>toggle chain C</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+
	}}		}}

OCA at 10:47, 29 July 2008

OCA — Tue, 29 Jul 2008 10:47:11 GMT

←Older revision		Revision as of 10:47, 29 July 2008
Line 1:		Line 1:
-	{{~~Structure~~	+	{{StructureD
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE=350\|CAPTION= 1pfk, resolution 2.4Å (<scene name='initialview01'>initial scene</scene>)	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1pfk, resolution 2.40Å (<scene name='initialview01'>initial scene</scene>)}}}
-	~~\|SITE=~~	+	\|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=FBP:SUGAR+(FRUCTOSE-1,6-DIPHOSPHATE)'>FBP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
-	\|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5~~'~~-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=FBP:FRUCTOSE-1,6-DIPHOSPHATE'>FBP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>	+
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/6-phosphofructokinase 6-phosphofructokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.11 2.7.1.11] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/6-phosphofructokinase 6-phosphofructokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.11 2.7.1.11] </span>
-	\|GENE=
	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00763 Bacterial_PFK]</span>		\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00763 Bacterial_PFK]</span>
-	\|RELATEDENTRY=
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1pfk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pfk OCA], [http://www.ebi.ac.uk/pdbsum/1pfk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1pfk RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1pfk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pfk OCA], [http://www.ebi.ac.uk/pdbsum/1pfk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1pfk RCSB]</span>
		+	\|FUNCTION={{GO\|id=GO:0003824 \| text = catalytic activity}}{{GO\|id=GO:0046872 \| text = metal ion binding}}{{GO\|id=GO:0000166 \| text = nucleotide binding}}{{GO\|id=GO:0005524 \| text = ATP binding}}{{GO\|id=GO:0005515 \| text = protein binding}}{{GO\|id=GO:0016301 \| text = kinase activity}}{{GO\|id=GO:0003872 \| text = 6-phosphofructokinase activity}}{{GO\|id=GO:0008443 \| text = phosphofructokinase activity}}{{GO\|id=GO:0016740 \| text = transferase activity}}{{GO\|id=GO:0000287 \| text = magnesium ion binding}}
		+	\|PROCESS={{GO\|id=GO:0006002 \| text = fructose 6-phosphate metabolic process}}{{GO\|id=GO:0006096 \| text = glycolysis}}
		+	\|COMPONENT={{GO\|id=GO:0005945 \| text = 6-phosphofructokinase complex}}{{GO\|id=GO:0005737 \| text = cytoplasm}}
		+	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkA01 1Pfka01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkA02 1Pfka02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkB02 1Pfkb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkB01 1Pfkb01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015913 Ipr015913], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015912 Ipr015912], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012828 Ipr012828], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012003 Ipr012003], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000023 Ipr000023]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00365 PF00365]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35575 d1pfka_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35576 d1pfkb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0A796 P0A796]</span>
	}}		}}

OCA: Protected "Template:STRUCTURE 1pfk" [edit=sysop:move=sysop]

OCA — Sat, 03 May 2008 02:01:41 GMT

Protected "Template:STRUCTURE 1pfk" [edit=sysop:move=sysop]

←Older revision

Revision as of 02:01, 3 May 2008

OCA: New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1pfk, resolution 2.4Å (initial scene) |SITE= |LIGAND= |SITE=
|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5'-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=FBP:FRUCTOSE-1,6-DIPHOSPHATE'>FBP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/6-phosphofructokinase 6-phosphofructokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.11 2.7.1.11] 
|GENE=
|DOMAIN=[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00763 Bacterial_PFK]
|RELATEDENTRY=
|RESOURCES=[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1pfk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pfk OCA], [http://www.ebi.ac.uk/pdbsum/1pfk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1pfk RCSB]
}}

←Older revision		Revision as of 13:35, 27 July 2012
Line 1:		Line 1:
	{{Structure		{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1pfk]], resolution 2.40Å (<scene name='initialview01'>default scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1pfk]], [[Resolution\|resolution]] 2.40Å (<scene name='initialview01'>default scene</scene>)}}}
-	\|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=FBP:~~SUGAR+(~~FRUCTOSE-1,6-DIPHOSPHATE)'>FBP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>	+	\|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=FBP:BETA-FRUCTOSE-1,6-DIPHOSPHATE'>FBP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/6-phosphofructokinase 6-phosphofructokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.11 2.7.1.11] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/6-phosphofructokinase 6-phosphofructokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.11 2.7.1.11] </span>
-	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00763 Bacterial_PFK]</span>
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1pfk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pfk OCA], [http://www.ebi.ac.uk/pdbsum/1pfk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1pfk RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1pfk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pfk OCA], [http://www.ebi.ac.uk/pdbsum/1pfk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1pfk RCSB]</span>
	\|FUNCTION={{GO\|id=GO:0003824 \| text = catalytic activity}}{{GO\|id=GO:0046872 \| text = metal ion binding}}{{GO\|id=GO:0000166 \| text = nucleotide binding}}{{GO\|id=GO:0005524 \| text = ATP binding}}{{GO\|id=GO:0005515 \| text = protein binding}}{{GO\|id=GO:0016301 \| text = kinase activity}}{{GO\|id=GO:0003872 \| text = 6-phosphofructokinase activity}}{{GO\|id=GO:0008443 \| text = phosphofructokinase activity}}{{GO\|id=GO:0016740 \| text = transferase activity}}{{GO\|id=GO:0000287 \| text = magnesium ion binding}}		\|FUNCTION={{GO\|id=GO:0003824 \| text = catalytic activity}}{{GO\|id=GO:0046872 \| text = metal ion binding}}{{GO\|id=GO:0000166 \| text = nucleotide binding}}{{GO\|id=GO:0005524 \| text = ATP binding}}{{GO\|id=GO:0005515 \| text = protein binding}}{{GO\|id=GO:0016301 \| text = kinase activity}}{{GO\|id=GO:0003872 \| text = 6-phosphofructokinase activity}}{{GO\|id=GO:0008443 \| text = phosphofructokinase activity}}{{GO\|id=GO:0016740 \| text = transferase activity}}{{GO\|id=GO:0000287 \| text = magnesium ion binding}}
Line 9:		Line 8:
	\|COMPONENT={{GO\|id=GO:0005945 \| text = 6-phosphofructokinase complex}}{{GO\|id=GO:0005737 \| text = cytoplasm}}		\|COMPONENT={{GO\|id=GO:0005945 \| text = 6-phosphofructokinase complex}}{{GO\|id=GO:0005737 \| text = cytoplasm}}
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkA01 1Pfka01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkA02 1Pfka02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkB02 1Pfkb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkB01 1Pfkb01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015913 Ipr015913], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015912 Ipr015912], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012828 Ipr012828], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012003 Ipr012003], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000023 Ipr000023]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00365 PF00365]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35575 d1pfka_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35576 d1pfkb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0A796 P0A796]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkA01 1Pfka01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkA02 1Pfka02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkB02 1Pfkb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkB01 1Pfkb01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015913 Ipr015913], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015912 Ipr015912], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012828 Ipr012828], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012003 Ipr012003], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000023 Ipr000023]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00365 PF00365]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35575 d1pfka_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35576 d1pfkb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0A796 P0A796]</span>
-	\|CONSURF={{!}}-	+	\|uPDB=1PFK\|CONSURF={{!}}-
	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]		{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"		{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"