Template:STRUCTURE 1tuu - Revision history

OCA at 12:01, 5 January 2013

OCA — Sat, 05 Jan 2013 12:01:10 GMT

OCA at 03:00, 18 February 2009

OCA — Wed, 18 Feb 2009 03:00:49 GMT

←Older revision		Revision as of 03:00, 18 February 2009
Line 1:		Line 1:
-	{{~~StructureD~~	+	{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1tuu, resolution 2.50Å (<scene name='initialview01'>~~initial~~ scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1tuu]], resolution 2.50Å (<scene name='initialview01'>default scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene>, <scene name='pdbligand=PIS:TRIHYDROGEN+THIODIPHOSPHATE'>PIS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>		\|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene>, <scene name='pdbligand=PIS:TRIHYDROGEN+THIODIPHOSPHATE'>PIS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Acetate_kinase Acetate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.2.1 2.7.2.1] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Acetate_kinase Acetate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.2.1 2.7.2.1] </span>
Line 10:		Line 10:
	\|COMPONENT={{GO\|id=GO:0005737 \| text = cytoplasm}}{{GO\|id=GO:0005622 \| text = intracellular}}		\|COMPONENT={{GO\|id=GO:0005737 \| text = cytoplasm}}{{GO\|id=GO:0005622 \| text = intracellular}}
	\|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004372 Ipr004372], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000890 Ipr000890]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00871 PF00871]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P38502 P38502]</span>		\|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004372 Ipr004372], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000890 Ipr000890]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00871 PF00871]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P38502 P38502]</span>
		+	\|CONSURF={{!}}-
		+	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
		+	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
		+	{{!}} '''Toggle Conservation Colors:'''
		+	{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
		+	Rows = identical sequences:
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>A [x]</text>
		+	<name>jmb_1tuu_A</name>
		+	<title>toggle chain A</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>B [x]</text>
		+	<name>jmb_1tuu_B</name>
		+	<title>toggle chain B</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+
	}}		}}

OCA at 08:49, 29 July 2008

OCA — Tue, 29 Jul 2008 08:49:02 GMT

←Older revision		Revision as of 08:49, 29 July 2008
Line 1:		Line 1:
-	{{~~Structure~~	+	{{StructureD
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE=350\|CAPTION= 1tuu, resolution 2.50Å (<scene name='initialview01'>initial scene</scene>)	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1tuu, resolution 2.50Å (<scene name='initialview01'>initial scene</scene>)}}}
-	~~\|SITE=~~	+	\|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene>, <scene name='pdbligand=PIS:TRIHYDROGEN+THIODIPHOSPHATE'>PIS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
-	\|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5~~'~~-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene>, <scene name='pdbligand=PIS:TRIHYDROGEN+THIODIPHOSPHATE'>PIS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>	+
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Acetate_kinase Acetate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.2.1 2.7.2.1] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Acetate_kinase Acetate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.2.1 2.7.2.1] </span>
	\|GENE= ACKA, ACK ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2210 Methanosarcina thermophila])		\|GENE= ACKA, ACK ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2210 Methanosarcina thermophila])
	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0282 ackA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK12440 PRK12440]</span>		\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0282 ackA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK12440 PRK12440]</span>
-	\|RELATEDENTRY=
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tuu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tuu OCA], [http://www.ebi.ac.uk/pdbsum/1tuu PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1tuu RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tuu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tuu OCA], [http://www.ebi.ac.uk/pdbsum/1tuu PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1tuu RCSB]</span>
		+	\|FUNCTION={{GO\|id=GO:0008776 \| text = acetate kinase activity}}{{GO\|id=GO:0016740 \| text = transferase activity}}{{GO\|id=GO:0016774 \| text = phosphotransferase activity, carboxyl group as acceptor}}{{GO\|id=GO:0016301 \| text = kinase activity}}
		+	\|PROCESS={{GO\|id=GO:0016310 \| text = phosphorylation}}{{GO\|id=GO:0006082 \| text = organic acid metabolic process}}{{GO\|id=GO:0008152 \| text = metabolic process}}
		+	\|COMPONENT={{GO\|id=GO:0005737 \| text = cytoplasm}}{{GO\|id=GO:0005622 \| text = intracellular}}
		+	\|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004372 Ipr004372], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000890 Ipr000890]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00871 PF00871]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P38502 P38502]</span>
	}}		}}

OCA: Protected "Template:STRUCTURE 1tuu" [edit=sysop:move=sysop]

OCA — Sat, 03 May 2008 07:23:45 GMT

Protected "Template:STRUCTURE 1tuu" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:23, 3 May 2008

OCA: New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1tuu, resolution 2.50Å (initial scene) |SITE= |LIGAND= |SITE=
|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5'-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene>, <scene name='pdbligand=PIS:TRIHYDROGEN+THIODIPHOSPHATE'>PIS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/Acetate_kinase Acetate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.2.1 2.7.2.1] 
|GENE= ACKA, ACK ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2210 Methanosarcina thermophila])
|DOMAIN=[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0282 ackA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK12440 PRK12440]
|RELATEDENTRY=
|RESOURCES=[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tuu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tuu OCA], [http://www.ebi.ac.uk/pdbsum/1tuu PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1tuu RCSB]
}}

←Older revision		Revision as of 12:01, 5 January 2013
Line 1:		Line 1:
	{{Structure		{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1tuu]], resolution 2.50Å (<scene name='initialview01'>default scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1tuu]], [[Resolution\|resolution]] 2.50Å (<scene name='initialview01'>default scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene>, <scene name='pdbligand=PIS:TRIHYDROGEN+THIODIPHOSPHATE'>PIS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>		\|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene>, <scene name='pdbligand=PIS:TRIHYDROGEN+THIODIPHOSPHATE'>PIS</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Acetate_kinase Acetate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.2.1 2.7.2.1] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Acetate_kinase Acetate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.2.1 2.7.2.1] </span>
	\|GENE= ACKA, ACK ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2210 Methanosarcina thermophila])		\|GENE= ACKA, ACK ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2210 Methanosarcina thermophila])
-	~~\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0282 ackA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK12440 PRK12440]</span>~~	+	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tuu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tuu OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1tuu RCSB], [http://www.ebi.ac.uk/pdbsum/1tuu PDBsum]</span>
-	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1tuu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tuu OCA], [http://www.~~ebi~~.~~ac.uk~~/~~pdbsum~~/1tuu ~~PDBsum~~], [http://www.~~rcsb~~.~~org~~/~~pdb~~/~~explore.do?structureId=~~1tuu ~~RCSB~~]</span>	+
	\|FUNCTION={{GO\|id=GO:0008776 \| text = acetate kinase activity}}{{GO\|id=GO:0016740 \| text = transferase activity}}{{GO\|id=GO:0016774 \| text = phosphotransferase activity, carboxyl group as acceptor}}{{GO\|id=GO:0016301 \| text = kinase activity}}		\|FUNCTION={{GO\|id=GO:0008776 \| text = acetate kinase activity}}{{GO\|id=GO:0016740 \| text = transferase activity}}{{GO\|id=GO:0016774 \| text = phosphotransferase activity, carboxyl group as acceptor}}{{GO\|id=GO:0016301 \| text = kinase activity}}
	\|PROCESS={{GO\|id=GO:0016310 \| text = phosphorylation}}{{GO\|id=GO:0006082 \| text = organic acid metabolic process}}{{GO\|id=GO:0008152 \| text = metabolic process}}		\|PROCESS={{GO\|id=GO:0016310 \| text = phosphorylation}}{{GO\|id=GO:0006082 \| text = organic acid metabolic process}}{{GO\|id=GO:0008152 \| text = metabolic process}}
	\|COMPONENT={{GO\|id=GO:0005737 \| text = cytoplasm}}{{GO\|id=GO:0005622 \| text = intracellular}}		\|COMPONENT={{GO\|id=GO:0005737 \| text = cytoplasm}}{{GO\|id=GO:0005622 \| text = intracellular}}
	\|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004372 Ipr004372], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000890 Ipr000890]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00871 PF00871]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P38502 P38502]</span>		\|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004372 Ipr004372], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000890 Ipr000890]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00871 PF00871]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P38502 P38502]</span>
-	\|CONSURF={{!}}-	+	\|uPDB=1TUU\|CONSURF={{!}}-
	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]		{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"		{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"