Template:STRUCTURE 1ujw - Revision history

OCA at 14:46, 26 July 2012

OCA — Thu, 26 Jul 2012 14:46:42 GMT

←Older revision		Revision as of 14:46, 26 July 2012
Line 1:		Line 1:
	{{Structure		{{Structure
	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1ujw]], [[Resolution\|resolution]] 2.75Å (<scene name='initialview01'>default scene</scene>)}}}		\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1ujw]], [[Resolution\|resolution]] 2.75Å (<scene name='initialview01'>default scene</scene>)}}}
-	\|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Gp1+A+801'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Gp1+A+811'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Lim+A+812'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Lda+A+601'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Lda+A+602'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Lda+A+603'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Lda+A+604'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+Lda+A+605'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Lda+A+606'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Lda+A+607'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Aae+A+802'>BC2</scene>, <scene name='pdbsite=BC3:Binding+Site+For+Residue+Lim+A+803'>BC3</scene>, <scene name='pdbsite=BC4:Binding+Site+For+Residue+Gol+A+701'>BC4</scene>, <scene name='pdbsite=BC5:Binding+Site+For+Residue+Gol+A+702'>BC5</scene>, <scene name='pdbsite=BC6:Binding+Site+For+Residue+Gol+A+703'>BC6</scene>, <scene name='pdbsite=BC7:Binding+Site+For+Residue+Gol+A+704'>BC7</scene>, <scene name='pdbsite=BC8:Binding+Site+For+Residue+Gol+A+705'>BC8</scene>, <scene name='pdbsite=BC9:Binding+Site+For+Residue+Gol+A+706'>BC9</scene>, <scene name='pdbsite=CC1:Binding+Site+For+Residue+Gol+A+707'>CC1</scene> and <scene name='pdbsite=CC2:Binding+Site+For+Residue+Gol+A+708'>CC2</scene>	+	\|LIGAND= <scene name='pdbligand=AAE:ACETOACETIC+ACID'>AAE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GP1:GLUCOSAMINE+1-PHOSPHATE'>GP1</scene>, <scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene>, <scene name='pdbligand=LIM:3-OXO-PENTADECANOIC+ACID'>LIM</scene>
-	\|LIGAND= <scene name='pdbligand=AAE:ACETOACETIC+ACID'>AAE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GP1:~~SUGAR+(~~GLUCOSAMINE+1-PHOSPHATE)'>GP1</scene>, <scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene>, <scene name='pdbligand=LIM:3-OXO-PENTADECANOIC+ACID'>LIM</scene>	+
	\|RELATEDENTRY=[[1nqe\|1nqe]], [[1jch\|1jch]]		\|RELATEDENTRY=[[1nqe\|1nqe]], [[1jch\|1jch]]
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ujw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ujw OCA], [http://www.ebi.ac.uk/pdbsum/1ujw PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ujw RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ujw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ujw OCA], [http://www.ebi.ac.uk/pdbsum/1ujw PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ujw RCSB]</span>

OCA at 07:29, 16 March 2011

OCA — Wed, 16 Mar 2011 07:29:12 GMT

←Older revision		Revision as of 07:29, 16 March 2011
Line 1:		Line 1:
	{{Structure		{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1ujw]], resolution 2.75Å (<scene name='initialview01'>default scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1ujw]], [[Resolution\|resolution]] 2.75Å (<scene name='initialview01'>default scene</scene>)}}}
-	\|LIGAND= <scene name='pdbligand=AAE:ACETOACETIC+ACID'>AAE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GP1:GLUCOSAMINE+1-PHOSPHATE'>GP1</scene>, <scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene>, <scene name='pdbligand=LIM:3-OXO-PENTADECANOIC+ACID'>LIM</scene>	+	\|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Gp1+A+801'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Gp1+A+811'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Lim+A+812'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Lda+A+601'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Lda+A+602'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Lda+A+603'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Lda+A+604'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+Lda+A+605'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Lda+A+606'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Lda+A+607'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Aae+A+802'>BC2</scene>, <scene name='pdbsite=BC3:Binding+Site+For+Residue+Lim+A+803'>BC3</scene>, <scene name='pdbsite=BC4:Binding+Site+For+Residue+Gol+A+701'>BC4</scene>, <scene name='pdbsite=BC5:Binding+Site+For+Residue+Gol+A+702'>BC5</scene>, <scene name='pdbsite=BC6:Binding+Site+For+Residue+Gol+A+703'>BC6</scene>, <scene name='pdbsite=BC7:Binding+Site+For+Residue+Gol+A+704'>BC7</scene>, <scene name='pdbsite=BC8:Binding+Site+For+Residue+Gol+A+705'>BC8</scene>, <scene name='pdbsite=BC9:Binding+Site+For+Residue+Gol+A+706'>BC9</scene>, <scene name='pdbsite=CC1:Binding+Site+For+Residue+Gol+A+707'>CC1</scene> and <scene name='pdbsite=CC2:Binding+Site+For+Residue+Gol+A+708'>CC2</scene>
-	~~\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01347 ligand_gated_channel], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK10641 btuB]</span~~>	+	\|LIGAND= <scene name='pdbligand=AAE:ACETOACETIC+ACID'>AAE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GP1:SUGAR+(GLUCOSAMINE+1-PHOSPHATE)'>GP1</scene>, <scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene>, <scene name='pdbligand=LIM:3-OXO-PENTADECANOIC+ACID'>LIM</scene>
	\|RELATEDENTRY=[[1nqe\|1nqe]], [[1jch\|1jch]]		\|RELATEDENTRY=[[1nqe\|1nqe]], [[1jch\|1jch]]
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ujw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ujw OCA], [http://www.ebi.ac.uk/pdbsum/1ujw PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ujw RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ujw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ujw OCA], [http://www.ebi.ac.uk/pdbsum/1ujw PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ujw RCSB]</span>
-	\|FUNCTION={{GO\|id=GO:0005215 \| text = transporter activity}}{{GO\|id=GO:0005515 \| text = protein binding}}{{GO\|id=GO:0005509 \| text = calcium ion binding}}{{GO\|id=GO:0015235 \| text = cobalamin transporter activity}}{{GO\|id=GO:0046872 \| text = metal ion binding}}{{GO\|id=GO:0004872 \| text = receptor activity}}{{GO\|id=GO:0016787 \| text = hydrolase activity}}{{GO\|id=GO:0004519 \| text = endonuclease activity}}{{GO\|id=GO:0003723 \| text = RNA binding}}{{GO\|id=GO:0043022 \| text = ribosome binding}}{{GO\|id=GO:0003676 \| text = nucleic acid binding}}{{GO\|id=GO:0005102 \| text = receptor binding}}{{GO\|id=GO:0004518 \| text = nuclease activity}}{{GO\|id=GO:0016788 \| text = hydrolase activity, acting on ester bonds}}	+	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/1ujwA01 1Ujwa01], [http://www.cathdb.info/domain/1ujwA02 1Ujwa02], [http://www.cathdb.info/domain/1ujwB00 1Ujwb00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000531 Ipr000531], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010917 Ipr010917], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010916 Ipr010916], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012910 Ipr012910], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010101 Ipr010101], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR016128 Ipr016128], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009105 Ipr009105], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003058 Ipr003058]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00593 PF00593], [http://pfam.sanger.ac.uk/family?acc=PF07715 PF07715], [http://pfam.sanger.ac.uk/family?acc=PF11570 PF11570]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=99471 d1ujwa_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=99472 d1ujwb_]</span>
-	\|PROCESS={{GO\|id=GO:0015889 \| text = cobalamin transport}}{{GO\|id=GO:0009597 \| text = detection of virus}}{{GO\|id=GO:0046718 \| text = entry of virus into host cell}}{{GO\|id=GO:0006810 \| text = transport}}{{GO\|id=GO:0019835 \| text = cytolysis}}{{GO\|id=GO:0042742 \| text = defense response to bacterium}}{{GO\|id=GO:0009405 \| text = pathogenesis}}	+	\|uPDB=1UJW\|CONSURF={{!}}-
-	\|COMPONENT={{GO\|id=GO:0016020 \| text = membrane}}{{GO\|id=GO:0016021 \| text = integral to membrane}}{{GO\|id=GO:0019867 \| text = outer membrane}}{{GO\|id=GO:0005727 \| text = extrachromosomal circular DNA}}	+
-	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/~~cgi-bin~~/~~cath/Domain.pl?domain_id=1ujwA02 1Ujwa02~~], [http://www.cathdb.info/~~cgi-bin~~/~~cath/Domain.pl?domain_id=1ujwA01 1Ujwa01~~], [http://www.cathdb.info/~~cgi-bin~~/~~cath/Domain.pl?domain_id=~~1ujwB00 1Ujwb00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=~~IPR012910 Ipr012910~~], [http://www.ebi.ac.uk/interpro/ISearch?query=~~IPR000531 Ipr000531~~], [http://www.ebi.ac.uk/interpro/ISearch?query=~~IPR010101 Ipr010101~~], [http://www.ebi.ac.uk/interpro/ISearch?query=~~IPR010917 Ipr010917~~], [http://www.ebi.ac.uk/interpro/ISearch?query=~~IPR010916 Ipr010916~~], [http://www.ebi.ac.uk/interpro/ISearch?query=~~IPR003058 Ipr003058~~], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009105 Ipr009105]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00593 PF00593], [http://pfam.sanger.ac.uk/family?acc=PF07715 PF07715]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=99471 d1ujwa_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=99472 d1ujwb_~~]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P06129 P06129], [http://ca.expasy.org/cgi-bin/niceprot.pl?P00646 P00646~~]</span>	+
-	\|CONSURF={{!}}-	+
	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]		{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"		{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

OCA at 08:51, 17 February 2009

OCA — Tue, 17 Feb 2009 08:51:36 GMT

←Older revision		Revision as of 08:51, 17 February 2009
Line 1:		Line 1:
-	{{~~StructureD~~	+	{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1ujw, resolution 2.75Å (<scene name='initialview01'>~~initial~~ scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[1ujw]], resolution 2.75Å (<scene name='initialview01'>default scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=AAE:ACETOACETIC+ACID'>AAE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GP1:GLUCOSAMINE+1-PHOSPHATE'>GP1</scene>, <scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene>, <scene name='pdbligand=LIM:3-OXO-PENTADECANOIC+ACID'>LIM</scene>		\|LIGAND= <scene name='pdbligand=AAE:ACETOACETIC+ACID'>AAE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GP1:GLUCOSAMINE+1-PHOSPHATE'>GP1</scene>, <scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene>, <scene name='pdbligand=LIM:3-OXO-PENTADECANOIC+ACID'>LIM</scene>
	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01347 ligand_gated_channel], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK10641 btuB]</span>		\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01347 ligand_gated_channel], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK10641 btuB]</span>
Line 9:		Line 9:
	\|COMPONENT={{GO\|id=GO:0016020 \| text = membrane}}{{GO\|id=GO:0016021 \| text = integral to membrane}}{{GO\|id=GO:0019867 \| text = outer membrane}}{{GO\|id=GO:0005727 \| text = extrachromosomal circular DNA}}		\|COMPONENT={{GO\|id=GO:0016020 \| text = membrane}}{{GO\|id=GO:0016021 \| text = integral to membrane}}{{GO\|id=GO:0019867 \| text = outer membrane}}{{GO\|id=GO:0005727 \| text = extrachromosomal circular DNA}}
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ujwA02 1Ujwa02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ujwA01 1Ujwa01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ujwB00 1Ujwb00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012910 Ipr012910], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000531 Ipr000531], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010101 Ipr010101], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010917 Ipr010917], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010916 Ipr010916], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003058 Ipr003058], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009105 Ipr009105]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00593 PF00593], [http://pfam.sanger.ac.uk/family?acc=PF07715 PF07715]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=99471 d1ujwa_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=99472 d1ujwb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P06129 P06129], [http://ca.expasy.org/cgi-bin/niceprot.pl?P00646 P00646]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ujwA02 1Ujwa02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ujwA01 1Ujwa01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ujwB00 1Ujwb00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012910 Ipr012910], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000531 Ipr000531], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010101 Ipr010101], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010917 Ipr010917], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010916 Ipr010916], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003058 Ipr003058], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009105 Ipr009105]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00593 PF00593], [http://pfam.sanger.ac.uk/family?acc=PF07715 PF07715]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=99471 d1ujwa_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=99472 d1ujwb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P06129 P06129], [http://ca.expasy.org/cgi-bin/niceprot.pl?P00646 P00646]</span>
		+	\|CONSURF={{!}}-
		+	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
		+	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
		+	{{!}} '''Toggle Conservation Colors:'''
		+	{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
		+	Rows = identical sequences:
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>A [x]</text>
		+	<name>jmb_1ujw_A</name>
		+	<title>toggle chain A</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>B [x]</text>
		+	<name>jmb_1ujw_B</name>
		+	<title>toggle chain B</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+
	}}		}}

OCA at 11:49, 28 July 2008

OCA — Mon, 28 Jul 2008 11:49:59 GMT

←Older revision		Revision as of 11:49, 28 July 2008
Line 1:		Line 1:
-	{{~~Structure~~	+	{{StructureD
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE=350\|CAPTION= 1ujw, resolution 2.75Å (<scene name='initialview01'>initial scene</scene>)	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|1ujw, resolution 2.75Å (<scene name='initialview01'>initial scene</scene>)}}}
-	~~\|SITE=~~	+
	\|LIGAND= <scene name='pdbligand=AAE:ACETOACETIC+ACID'>AAE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GP1:GLUCOSAMINE+1-PHOSPHATE'>GP1</scene>, <scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene>, <scene name='pdbligand=LIM:3-OXO-PENTADECANOIC+ACID'>LIM</scene>		\|LIGAND= <scene name='pdbligand=AAE:ACETOACETIC+ACID'>AAE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GP1:GLUCOSAMINE+1-PHOSPHATE'>GP1</scene>, <scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene>, <scene name='pdbligand=LIM:3-OXO-PENTADECANOIC+ACID'>LIM</scene>
-	\|ACTIVITY=
-	\|GENE=
	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01347 ligand_gated_channel], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK10641 btuB]</span>		\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01347 ligand_gated_channel], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK10641 btuB]</span>
	\|RELATEDENTRY=[[1nqe\|1nqe]], [[1jch\|1jch]]		\|RELATEDENTRY=[[1nqe\|1nqe]], [[1jch\|1jch]]
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ujw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ujw OCA], [http://www.ebi.ac.uk/pdbsum/1ujw PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ujw RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ujw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ujw OCA], [http://www.ebi.ac.uk/pdbsum/1ujw PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ujw RCSB]</span>
		+	\|FUNCTION={{GO\|id=GO:0005215 \| text = transporter activity}}{{GO\|id=GO:0005515 \| text = protein binding}}{{GO\|id=GO:0005509 \| text = calcium ion binding}}{{GO\|id=GO:0015235 \| text = cobalamin transporter activity}}{{GO\|id=GO:0046872 \| text = metal ion binding}}{{GO\|id=GO:0004872 \| text = receptor activity}}{{GO\|id=GO:0016787 \| text = hydrolase activity}}{{GO\|id=GO:0004519 \| text = endonuclease activity}}{{GO\|id=GO:0003723 \| text = RNA binding}}{{GO\|id=GO:0043022 \| text = ribosome binding}}{{GO\|id=GO:0003676 \| text = nucleic acid binding}}{{GO\|id=GO:0005102 \| text = receptor binding}}{{GO\|id=GO:0004518 \| text = nuclease activity}}{{GO\|id=GO:0016788 \| text = hydrolase activity, acting on ester bonds}}
		+	\|PROCESS={{GO\|id=GO:0015889 \| text = cobalamin transport}}{{GO\|id=GO:0009597 \| text = detection of virus}}{{GO\|id=GO:0046718 \| text = entry of virus into host cell}}{{GO\|id=GO:0006810 \| text = transport}}{{GO\|id=GO:0019835 \| text = cytolysis}}{{GO\|id=GO:0042742 \| text = defense response to bacterium}}{{GO\|id=GO:0009405 \| text = pathogenesis}}
		+	\|COMPONENT={{GO\|id=GO:0016020 \| text = membrane}}{{GO\|id=GO:0016021 \| text = integral to membrane}}{{GO\|id=GO:0019867 \| text = outer membrane}}{{GO\|id=GO:0005727 \| text = extrachromosomal circular DNA}}
		+	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ujwA02 1Ujwa02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ujwA01 1Ujwa01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ujwB00 1Ujwb00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012910 Ipr012910], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000531 Ipr000531], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010101 Ipr010101], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010917 Ipr010917], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010916 Ipr010916], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003058 Ipr003058], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009105 Ipr009105]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00593 PF00593], [http://pfam.sanger.ac.uk/family?acc=PF07715 PF07715]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=99471 d1ujwa_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=99472 d1ujwb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P06129 P06129], [http://ca.expasy.org/cgi-bin/niceprot.pl?P00646 P00646]</span>
	}}		}}

OCA: Protected "Template:STRUCTURE 1ujw" [edit=sysop:move=sysop]

OCA — Sat, 03 May 2008 08:19:34 GMT

Protected "Template:STRUCTURE 1ujw" [edit=sysop:move=sysop]

←Older revision

Revision as of 08:19, 3 May 2008

OCA: New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1ujw, resolution 2.75Å (initial scene) |SITE= |LIGAND= |SITE=
|LIGAND= <scene name='pdbligand=AAE:ACETOACETIC+ACID'>AAE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GP1:GLUCOSAMINE+1-PHOSPHATE'>GP1</scene>, <scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene>, <scene name='pdbligand=LIM:3-OXO-PENTADECANOIC+ACID'>LIM</scene>
|ACTIVITY=
|GENE=
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01347 ligand_gated_channel], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK10641 btuB]</span>
|RELATEDENTRY=[[1nqe|1nqe]], [[1jch|1jch]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ujw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ujw OCA], [http://www.ebi.ac.uk/pdbsum/1ujw PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ujw RCSB]</span>
}}