Template:STRUCTURE 2ada - Revision history

OCA at 10:06, 6 January 2013

OCA — Sun, 06 Jan 2013 10:06:32 GMT

OCA at 16:36, 16 February 2009

OCA — Mon, 16 Feb 2009 16:36:39 GMT

←Older revision		Revision as of 16:36, 16 February 2009
Line 1:		Line 1:
-	{{~~StructureD~~	+	{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|2ada, resolution 2.40Å (<scene name='initialview01'>~~initial~~ scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[2ada]], resolution 2.40Å (<scene name='initialview01'>default scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=HPR:6-HYDROXY-7,8-DIHYDRO+PURINE+NUCLEOSIDE'>HPR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>		\|LIGAND= <scene name='pdbligand=HPR:6-HYDROXY-7,8-DIHYDRO+PURINE+NUCLEOSIDE'>HPR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenosine_deaminase Adenosine deaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.4.4 3.5.4.4] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenosine_deaminase Adenosine deaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.4.4 3.5.4.4] </span>
Line 9:		Line 9:
	\|COMPONENT={{GO\|id=GO:0005737 \| text = cytoplasm}}		\|COMPONENT={{GO\|id=GO:0005737 \| text = cytoplasm}}
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2ada000 2Ada000]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001365 Ipr001365], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006650 Ipr006650], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006330 Ipr006330]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00962 PF00962]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=29027 d2ada__]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P03958 P03958]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2ada000 2Ada000]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001365 Ipr001365], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006650 Ipr006650], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006330 Ipr006330]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00962 PF00962]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=29027 d2ada__]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P03958 P03958]</span>
		+	\|CONSURF={{!}}-
		+	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
		+	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
		+	{{!}} '''Toggle Conservation Colors:'''
		+	{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
		+	Rows = identical sequences:
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>A [x]</text>
		+	<name>jmb_2ada_A</name>
		+	<title>toggle chain A</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+
	}}		}}

OCA at 19:51, 27 July 2008

OCA — Sun, 27 Jul 2008 19:51:03 GMT

←Older revision		Revision as of 19:51, 27 July 2008
Line 1:		Line 1:
-	{{~~Structure~~	+	{{StructureD
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE=350\|CAPTION= 2ada, resolution 2.4Å (<scene name='initialview01'>initial scene</scene>)	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|2ada, resolution 2.40Å (<scene name='initialview01'>initial scene</scene>)}}}
-	~~\|SITE=~~	+
	\|LIGAND= <scene name='pdbligand=HPR:6-HYDROXY-7,8-DIHYDRO+PURINE+NUCLEOSIDE'>HPR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>		\|LIGAND= <scene name='pdbligand=HPR:6-HYDROXY-7,8-DIHYDRO+PURINE+NUCLEOSIDE'>HPR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenosine_deaminase Adenosine deaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.4.4 3.5.4.4] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenosine_deaminase Adenosine deaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.4.4 3.5.4.4] </span>
-	\|GENE=
	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01320 ADA]</span>		\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01320 ADA]</span>
-	\|RELATEDENTRY=
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ada FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ada OCA], [http://www.ebi.ac.uk/pdbsum/2ada PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ada RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ada FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ada OCA], [http://www.ebi.ac.uk/pdbsum/2ada PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ada RCSB]</span>
		+	\|FUNCTION={{GO\|id=GO:0046872 \| text = metal ion binding}}{{GO\|id=GO:0016787 \| text = hydrolase activity}}{{GO\|id=GO:0019239 \| text = deaminase activity}}{{GO\|id=GO:0004000 \| text = adenosine deaminase activity}}
		+	\|PROCESS={{GO\|id=GO:0006163 \| text = purine nucleotide metabolic process}}{{GO\|id=GO:0006955 \| text = immune response}}{{GO\|id=GO:0009168 \| text = purine ribonucleoside monophosphate biosynthetic process}}{{GO\|id=GO:0009117 \| text = nucleotide metabolic process}}
		+	\|COMPONENT={{GO\|id=GO:0005737 \| text = cytoplasm}}
		+	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2ada000 2Ada000]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001365 Ipr001365], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006650 Ipr006650], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006330 Ipr006330]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00962 PF00962]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=29027 d2ada__]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P03958 P03958]</span>
	}}		}}

OCA: Protected "Template:STRUCTURE 2ada" [edit=sysop:move=sysop]

OCA — Sat, 03 May 2008 15:54:08 GMT

Protected "Template:STRUCTURE 2ada" [edit=sysop:move=sysop]

←Older revision

Revision as of 15:54, 3 May 2008

OCA: New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 2ada, resolution 2.4Å (initial scene) |SITE= |LIGAND= |SITE=
|LIGAND= <scene name='pdbligand=HPR:6-HYDROXY-7,8-DIHYDRO+PURINE+NUCLEOSIDE'>HPR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/Adenosine_deaminase Adenosine deaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.4.4 3.5.4.4] 
|GENE=
|DOMAIN=[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01320 ADA]
|RELATEDENTRY=
|RESOURCES=[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ada FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ada OCA], [http://www.ebi.ac.uk/pdbsum/2ada PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ada RCSB]
}}

←Older revision		Revision as of 10:06, 6 January 2013
Line 1:		Line 1:
	{{Structure		{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[2ada]], resolution 2.40Å (<scene name='initialview01'>default scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[2ada]], [[Resolution\|resolution]] 2.40Å (<scene name='initialview01'>default scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=HPR:6-HYDROXY-7,8-DIHYDRO+PURINE+NUCLEOSIDE'>HPR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>		\|LIGAND= <scene name='pdbligand=HPR:6-HYDROXY-7,8-DIHYDRO+PURINE+NUCLEOSIDE'>HPR</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenosine_deaminase Adenosine deaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.4.4 3.5.4.4] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenosine_deaminase Adenosine deaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.4.4 3.5.4.4] </span>
-	~~\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01320 ADA]</span>~~	+	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ada FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ada OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ada RCSB], [http://www.ebi.ac.uk/pdbsum/2ada PDBsum]</span>
-	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ada FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ada OCA], [http://www.~~ebi~~.~~ac.uk~~/~~pdbsum~~/2ada ~~PDBsum~~], [http://www.~~rcsb~~.~~org~~/~~pdb~~/~~explore.do?structureId=~~2ada ~~RCSB~~]</span>	+
	\|FUNCTION={{GO\|id=GO:0046872 \| text = metal ion binding}}{{GO\|id=GO:0016787 \| text = hydrolase activity}}{{GO\|id=GO:0019239 \| text = deaminase activity}}{{GO\|id=GO:0004000 \| text = adenosine deaminase activity}}		\|FUNCTION={{GO\|id=GO:0046872 \| text = metal ion binding}}{{GO\|id=GO:0016787 \| text = hydrolase activity}}{{GO\|id=GO:0019239 \| text = deaminase activity}}{{GO\|id=GO:0004000 \| text = adenosine deaminase activity}}
	\|PROCESS={{GO\|id=GO:0006163 \| text = purine nucleotide metabolic process}}{{GO\|id=GO:0006955 \| text = immune response}}{{GO\|id=GO:0009168 \| text = purine ribonucleoside monophosphate biosynthetic process}}{{GO\|id=GO:0009117 \| text = nucleotide metabolic process}}		\|PROCESS={{GO\|id=GO:0006163 \| text = purine nucleotide metabolic process}}{{GO\|id=GO:0006955 \| text = immune response}}{{GO\|id=GO:0009168 \| text = purine ribonucleoside monophosphate biosynthetic process}}{{GO\|id=GO:0009117 \| text = nucleotide metabolic process}}
	\|COMPONENT={{GO\|id=GO:0005737 \| text = cytoplasm}}		\|COMPONENT={{GO\|id=GO:0005737 \| text = cytoplasm}}
	\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2ada000 2Ada000]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001365 Ipr001365], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006650 Ipr006650], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006330 Ipr006330]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00962 PF00962]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=29027 d2ada__]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P03958 P03958]</span>		\|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=2ada000 2Ada000]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001365 Ipr001365], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006650 Ipr006650], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006330 Ipr006330]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00962 PF00962]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=29027 d2ada__]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P03958 P03958]</span>
-	\|CONSURF={{!}}-	+	\|uPDB=2ADA\|CONSURF={{!}}-
	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]		{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"		{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"