Template:STRUCTURE 2h9i - Revision history

OCA at 19:57, 25 July 2012

OCA — Wed, 25 Jul 2012 19:57:32 GMT

←Older revision		Revision as of 19:57, 25 July 2012
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	{{Structure		{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[2h9i]], resolution 2.20Å (<scene name='initialview01'>default scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[2h9i]], [[Resolution\|resolution]] 2.20Å (<scene name='initialview01'>default scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=EAD:{(2R,3S,4R,5R)-5-[(4S)-3-(AMINOCARBONYL)-4-(2-ETHYLISONICOTINOYL)PYRIDIN-1(4H)-YL]-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL}METHYL+[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+DIPHOSPHATE'>EAD</scene>		\|LIGAND= <scene name='pdbligand=EAD:{(2R,3S,4R,5R)-5-[(4S)-3-(AMINOCARBONYL)-4-(2-ETHYLISONICOTINOYL)PYRIDIN-1(4H)-YL]-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL}METHYL+[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+DIPHOSPHATE'>EAD</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Enoyl-[acyl-carrier-protein]_reductase_(NADH) Enoyl-[acyl-carrier-protein] reductase (NADH)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.1.9 1.3.1.9] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Enoyl-[acyl-carrier-protein]_reductase_(NADH) Enoyl-[acyl-carrier-protein] reductase (NADH)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.1.9 1.3.1.9] </span>
	\|GENE= inhA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 Mycobacterium tuberculosis])		\|GENE= inhA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 Mycobacterium tuberculosis])
-	\|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0623 FabI], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK07889 PRK07889]</span>
	\|RELATEDENTRY=[[1zid\|1zid]]		\|RELATEDENTRY=[[1zid\|1zid]]
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2h9i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h9i OCA], [http://www.ebi.ac.uk/pdbsum/2h9i PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2h9i RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2h9i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h9i OCA], [http://www.ebi.ac.uk/pdbsum/2h9i PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2h9i RCSB]</span>
Line 10:		Line 9:
	\|PROCESS={{GO\|id=GO:0008610 \| text = lipid biosynthetic process}}{{GO\|id=GO:0046677 \| text = response to antibiotic}}{{GO\|id=GO:0006633 \| text = fatty acid biosynthetic process}}{{GO\|id=GO:0008152 \| text = metabolic process}}		\|PROCESS={{GO\|id=GO:0008610 \| text = lipid biosynthetic process}}{{GO\|id=GO:0046677 \| text = response to antibiotic}}{{GO\|id=GO:0006633 \| text = fatty acid biosynthetic process}}{{GO\|id=GO:0008152 \| text = metabolic process}}
	\|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014358 Ipr014358], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002198 Ipr002198]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0A5Y6 P0A5Y6]</span>		\|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014358 Ipr014358], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002198 Ipr002198]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0A5Y6 P0A5Y6]</span>
-	\|CONSURF={{!}}-	+	\|uPDB=2H9I\|CONSURF={{!}}-
	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]		{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"		{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

OCA at 16:06, 16 February 2009

OCA — Mon, 16 Feb 2009 16:06:05 GMT

←Older revision		Revision as of 16:06, 16 February 2009
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-	{{~~StructureD~~	+	{{Structure
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|2h9i, resolution 2.20Å (<scene name='initialview01'>~~initial~~ scene</scene>)}}}	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE\|}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|[[2h9i]], resolution 2.20Å (<scene name='initialview01'>default scene</scene>)}}}
	\|LIGAND= <scene name='pdbligand=EAD:{(2R,3S,4R,5R)-5-[(4S)-3-(AMINOCARBONYL)-4-(2-ETHYLISONICOTINOYL)PYRIDIN-1(4H)-YL]-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL}METHYL+[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+DIPHOSPHATE'>EAD</scene>		\|LIGAND= <scene name='pdbligand=EAD:{(2R,3S,4R,5R)-5-[(4S)-3-(AMINOCARBONYL)-4-(2-ETHYLISONICOTINOYL)PYRIDIN-1(4H)-YL]-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL}METHYL+[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+DIPHOSPHATE'>EAD</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Enoyl-[acyl-carrier-protein]_reductase_(NADH) Enoyl-[acyl-carrier-protein] reductase (NADH)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.1.9 1.3.1.9] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Enoyl-[acyl-carrier-protein]_reductase_(NADH) Enoyl-[acyl-carrier-protein] reductase (NADH)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.1.9 1.3.1.9] </span>
Line 10:		Line 10:
	\|PROCESS={{GO\|id=GO:0008610 \| text = lipid biosynthetic process}}{{GO\|id=GO:0046677 \| text = response to antibiotic}}{{GO\|id=GO:0006633 \| text = fatty acid biosynthetic process}}{{GO\|id=GO:0008152 \| text = metabolic process}}		\|PROCESS={{GO\|id=GO:0008610 \| text = lipid biosynthetic process}}{{GO\|id=GO:0046677 \| text = response to antibiotic}}{{GO\|id=GO:0006633 \| text = fatty acid biosynthetic process}}{{GO\|id=GO:0008152 \| text = metabolic process}}
	\|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014358 Ipr014358], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002198 Ipr002198]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0A5Y6 P0A5Y6]</span>		\|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014358 Ipr014358], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002198 Ipr002198]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0A5Y6 P0A5Y6]</span>
		+	\|CONSURF={{!}}-
		+	{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif\|center]]
		+	{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
		+	{{!}} '''Toggle Conservation Colors:'''
		+	{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
		+	Rows = identical sequences:
		+	<jmol>
		+	<jmolButton>
		+	<script></script>
		+	<text>A [x]</text>
		+	<name>jmb_2h9i_A</name>
		+	<title>toggle chain A</title>
		+	<jsscript>ConsurfChainButton(elementClicked)</jsscript>
		+	<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
		+	</jmolButton>
		+	</jmol>
		+
	}}		}}

OCA at 18:38, 27 July 2008

OCA — Sun, 27 Jul 2008 18:38:17 GMT

←Older revision		Revision as of 18:38, 27 July 2008
Line 1:		Line 1:
-	{{~~Structure~~	+	{{StructureD
-	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE=350\|CAPTION= 2h9i, resolution 2.~~200~~Å (<scene name='initialview01'>initial scene</scene>)	+	\|PDB= {{{PDB}}}\|SCENE={{{SCENE}}}\|SIZE={{{SIZE\|350}}}\|CAPTION={{{CAPTION\|2h9i, resolution 2.20Å (<scene name='initialview01'>initial scene</scene>)}}}
-	~~\|SITE=~~	+
	\|LIGAND= <scene name='pdbligand=EAD:{(2R,3S,4R,5R)-5-[(4S)-3-(AMINOCARBONYL)-4-(2-ETHYLISONICOTINOYL)PYRIDIN-1(4H)-YL]-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL}METHYL+[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+DIPHOSPHATE'>EAD</scene>		\|LIGAND= <scene name='pdbligand=EAD:{(2R,3S,4R,5R)-5-[(4S)-3-(AMINOCARBONYL)-4-(2-ETHYLISONICOTINOYL)PYRIDIN-1(4H)-YL]-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL}METHYL+[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+DIPHOSPHATE'>EAD</scene>
	\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Enoyl-[acyl-carrier-protein]_reductase_(NADH) Enoyl-[acyl-carrier-protein] reductase (NADH)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.1.9 1.3.1.9] </span>		\|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Enoyl-[acyl-carrier-protein]_reductase_(NADH) Enoyl-[acyl-carrier-protein] reductase (NADH)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.1.9 1.3.1.9] </span>
Line 8:		Line 7:
	\|RELATEDENTRY=[[1zid\|1zid]]		\|RELATEDENTRY=[[1zid\|1zid]]
	\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2h9i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h9i OCA], [http://www.ebi.ac.uk/pdbsum/2h9i PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2h9i RCSB]</span>		\|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2h9i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h9i OCA], [http://www.ebi.ac.uk/pdbsum/2h9i PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2h9i RCSB]</span>
		+	\|FUNCTION={{GO\|id=GO:0004318 \| text = enoyl-[acyl-carrier-protein] reductase (NADH) activity}}{{GO\|id=GO:0016491 \| text = oxidoreductase activity}}
		+	\|PROCESS={{GO\|id=GO:0008610 \| text = lipid biosynthetic process}}{{GO\|id=GO:0046677 \| text = response to antibiotic}}{{GO\|id=GO:0006633 \| text = fatty acid biosynthetic process}}{{GO\|id=GO:0008152 \| text = metabolic process}}
		+	\|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014358 Ipr014358], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002198 Ipr002198]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0A5Y6 P0A5Y6]</span>
	}}		}}

OCA: Protected "Template:STRUCTURE 2h9i" [edit=sysop:move=sysop]

OCA — Sun, 04 May 2008 03:01:14 GMT

Protected "Template:STRUCTURE 2h9i" [edit=sysop:move=sysop]

←Older revision

Revision as of 03:01, 4 May 2008

OCA: New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 2h9i, resolution 2.200Å (initial scene) |SITE= |LIGAND= |SITE=
|LIGAND= <scene name='pdbligand=EAD:{(2R,3S,4R,5R)-5-[(4S)-3-(AMINOCARBONYL)-4-(2-ETHYLISONICOTINOYL)PYRIDIN-1(4H)-YL]-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL}METHYL+[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL+DIHYDROGEN+DIPHOSPHATE'>EAD</scene>
|ACTIVITY= [http://en.wikipedia.org/wiki/Enoyl-[acyl-carrier-protein]_reductase_(NADH) Enoyl-[acyl-carrier-protein] reductase (NADH)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.1.9 1.3.1.9] 
|GENE= inhA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 Mycobacterium tuberculosis])
|DOMAIN=[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0623 FabI], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK07889 PRK07889]
|RELATEDENTRY=[[1zid|1zid]]
|RESOURCES=[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2h9i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h9i OCA], [http://www.ebi.ac.uk/pdbsum/2h9i PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2h9i RCSB]
}}