Michael Strong: New page: == H1N1 Swine Flu Multiple Sequence Alignment of PA Protein, 42 sequences== {| class="wikitable" |Protein |Polymorphism |Strain with Polymorphism |Number of Strains with Polymorphism |---...

Michael Strong — Fri, 15 May 2009 17:58:28 GMT

New page: == H1N1 Swine Flu Multiple Sequence Alignment of PA Protein, 42 sequences== {| class="wikitable" |Protein |Polymorphism |Strain with Polymorphism |Number of Strains with Polymorphism |---...

New page

== H1N1 Swine Flu Multiple Sequence Alignment of PA Protein, 42 sequences==

{| class="wikitable"
|Protein
|Polymorphism
|Strain with Polymorphism
|Number of Strains with Polymorphism
|----
|PA
|S224P
|gi|227977170_A/California/07/2
|6
|----
|PA
|R269K
|gi|229484063_A/Canada-NS/RV153
|2
|----
|PA
|L275I
|gi|229484065_A/Mexico/InDRE448
|all others
|----
|PA
|M581L
|gi|237511889_A/Mexico/4108/200
|11
|----
|PA
|L702P
|gi|237624325_A/swine/Alberta/O
|1
|----
|}

<pre>
gi|237511877_A/Mexico/4603/200 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|237511887_A/Mexico/4482/200 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229484063_A/Canada-NS/RV153 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229892778_A/Canada-NS/RV153 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|237624325_A/swine/Alberta/O MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|227831785_A/California/06/2 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|227831770_A/California/05/2 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229536083_A/Indiana/09/2009 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229783410_A/New_York/1682/2 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229783389_A/New_York/1669/2 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229892772_A/Canada-NS/RV153 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|237511881_A/Mexico/4486/200 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|237511889_A/Mexico/4108/200 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|237511879_A/Mexico/4604/200 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229892776_A/Canada-AB/RV153 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229892782_A/Canada-ON/RV152 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229892774_A/Canada-ON/RV152 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229892780_A/Mexico/InDRE411 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229535826_A/California/14/2 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229536113_A/Michigan/02/200 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229536127_A/New_York/13/200 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229535979_A/Texas/08/2009 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229535808_A/Texas/09/2009 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229484067_A/Canada-ON/RV152 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229484065_A/Mexico/InDRE448 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229396441_A/New_York/10/200 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229396379_A/New_York/11/200 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229396455_A/New_York/15/200 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229396397_A/New_York/18/200 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229396408_A/New_York/31/200 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229396485_A/New_York/19/200 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229396502_A/Ohio/07/2009 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|227977134_A/Texas/04/2009 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229299530_A/Texas/04/2009 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|227831799_A/Texas/05/2009 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229299510_A/Texas/05/2009 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|227977170_A/California/07/2 MEDFVRQCFNPMIVELAXKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|227977146_A/California/07/2 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|227831815_A/California/07/2 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|227977114_A/California/04/2 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|227809828_A/California/04/2 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
gi|229396427_A/California/08/2 MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSD 50
***************** ********************************

gi|237511877_A/Mexico/4603/200 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|237511887_A/Mexico/4482/200 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229484063_A/Canada-NS/RV153 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229892778_A/Canada-NS/RV153 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|237624325_A/swine/Alberta/O FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|227831785_A/California/06/2 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|227831770_A/California/05/2 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229536083_A/Indiana/09/2009 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229783410_A/New_York/1682/2 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229783389_A/New_York/1669/2 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229892772_A/Canada-NS/RV153 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|237511881_A/Mexico/4486/200 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|237511889_A/Mexico/4108/200 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|237511879_A/Mexico/4604/200 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229892776_A/Canada-AB/RV153 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229892782_A/Canada-ON/RV152 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229892774_A/Canada-ON/RV152 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229892780_A/Mexico/InDRE411 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229535826_A/California/14/2 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229536113_A/Michigan/02/200 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229536127_A/New_York/13/200 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229535979_A/Texas/08/2009 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229535808_A/Texas/09/2009 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229484067_A/Canada-ON/RV152 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229484065_A/Mexico/InDRE448 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229396441_A/New_York/10/200 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229396379_A/New_York/11/200 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229396455_A/New_York/15/200 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229396397_A/New_York/18/200 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229396408_A/New_York/31/200 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229396485_A/New_York/19/200 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229396502_A/Ohio/07/2009 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|227977134_A/Texas/04/2009 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229299530_A/Texas/04/2009 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|227831799_A/Texas/05/2009 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229299510_A/Texas/05/2009 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|227977170_A/California/07/2 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|227977146_A/California/07/2 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|227831815_A/California/07/2 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|227977114_A/California/04/2 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|227809828_A/California/04/2 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
gi|229396427_A/California/08/2 FHFIDERGESIIVESGDPNALLKHRFEIIEGRDRIMAWTVVNSICNTTGV 100
**************************************************

gi|237511877_A/Mexico/4603/200 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|237511887_A/Mexico/4482/200 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229484063_A/Canada-NS/RV153 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229892778_A/Canada-NS/RV153 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|237624325_A/swine/Alberta/O EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|227831785_A/California/06/2 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|227831770_A/California/05/2 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229536083_A/Indiana/09/2009 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229783410_A/New_York/1682/2 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229783389_A/New_York/1669/2 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229892772_A/Canada-NS/RV153 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|237511881_A/Mexico/4486/200 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|237511889_A/Mexico/4108/200 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|237511879_A/Mexico/4604/200 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229892776_A/Canada-AB/RV153 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229892782_A/Canada-ON/RV152 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229892774_A/Canada-ON/RV152 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229892780_A/Mexico/InDRE411 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229535826_A/California/14/2 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229536113_A/Michigan/02/200 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229536127_A/New_York/13/200 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229535979_A/Texas/08/2009 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229535808_A/Texas/09/2009 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229484067_A/Canada-ON/RV152 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229484065_A/Mexico/InDRE448 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229396441_A/New_York/10/200 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229396379_A/New_York/11/200 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229396455_A/New_York/15/200 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229396397_A/New_York/18/200 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229396408_A/New_York/31/200 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229396485_A/New_York/19/200 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229396502_A/Ohio/07/2009 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|227977134_A/Texas/04/2009 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229299530_A/Texas/04/2009 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|227831799_A/Texas/05/2009 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229299510_A/Texas/05/2009 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|227977170_A/California/07/2 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|227977146_A/California/07/2 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|227831815_A/California/07/2 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|227977114_A/California/04/2 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|227809828_A/California/04/2 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
gi|229396427_A/California/08/2 EKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSF 150
**************************************************

gi|237511877_A/Mexico/4603/200 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|237511887_A/Mexico/4482/200 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229484063_A/Canada-NS/RV153 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229892778_A/Canada-NS/RV153 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|237624325_A/swine/Alberta/O TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|227831785_A/California/06/2 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|227831770_A/California/05/2 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229536083_A/Indiana/09/2009 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229783410_A/New_York/1682/2 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229783389_A/New_York/1669/2 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229892772_A/Canada-NS/RV153 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|237511881_A/Mexico/4486/200 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|237511889_A/Mexico/4108/200 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|237511879_A/Mexico/4604/200 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229892776_A/Canada-AB/RV153 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229892782_A/Canada-ON/RV152 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229892774_A/Canada-ON/RV152 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229892780_A/Mexico/InDRE411 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229535826_A/California/14/2 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229536113_A/Michigan/02/200 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229536127_A/New_York/13/200 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229535979_A/Texas/08/2009 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229535808_A/Texas/09/2009 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229484067_A/Canada-ON/RV152 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229484065_A/Mexico/InDRE448 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229396441_A/New_York/10/200 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229396379_A/New_York/11/200 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229396455_A/New_York/15/200 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229396397_A/New_York/18/200 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229396408_A/New_York/31/200 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229396485_A/New_York/19/200 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229396502_A/Ohio/07/2009 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|227977134_A/Texas/04/2009 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229299530_A/Texas/04/2009 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|227831799_A/Texas/05/2009 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229299510_A/Texas/05/2009 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|227977170_A/California/07/2 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|227977146_A/California/07/2 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|227831815_A/California/07/2 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|227977114_A/California/04/2 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|227809828_A/California/04/2 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
gi|229396427_A/California/08/2 TGEEMATKADYTLDEESRARIKTRLFTIRQEMASRSLWDSFRQSERGEET 200
**************************************************

gi|237511877_A/Mexico/4603/200 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|237511887_A/Mexico/4482/200 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229484063_A/Canada-NS/RV153 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229892778_A/Canada-NS/RV153 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|237624325_A/swine/Alberta/O IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|227831785_A/California/06/2 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|227831770_A/California/05/2 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229536083_A/Indiana/09/2009 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229783410_A/New_York/1682/2 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229783389_A/New_York/1669/2 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229892772_A/Canada-NS/RV153 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|237511881_A/Mexico/4486/200 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|237511889_A/Mexico/4108/200 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|237511879_A/Mexico/4604/200 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229892776_A/Canada-AB/RV153 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229892782_A/Canada-ON/RV152 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229892774_A/Canada-ON/RV152 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229892780_A/Mexico/InDRE411 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229535826_A/California/14/2 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229536113_A/Michigan/02/200 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229536127_A/New_York/13/200 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229535979_A/Texas/08/2009 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229535808_A/Texas/09/2009 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229484067_A/Canada-ON/RV152 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229484065_A/Mexico/InDRE448 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229396441_A/New_York/10/200 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229396379_A/New_York/11/200 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229396455_A/New_York/15/200 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229396397_A/New_York/18/200 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229396408_A/New_York/31/200 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229396485_A/New_York/19/200 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229396502_A/Ohio/07/2009 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|227977134_A/Texas/04/2009 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229299530_A/Texas/04/2009 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|227831799_A/Texas/05/2009 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229299510_A/Texas/05/2009 IEEKFEITGTMRKLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|227977170_A/California/07/2 IEEKFEITGTMRKLADQSLPPNFPSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|227977146_A/California/07/2 IEEKFEITGTMRKLADQSLPPNFPSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|227831815_A/California/07/2 IEEKFEITGTMRKLADQSLPPNFPSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|227977114_A/California/04/2 IEEKFEITGTMRKLADQSLPPNFPSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|227809828_A/California/04/2 IEEKFEITGTMRKLADQSLPPNFPSLENFRAYVDGFEPNGCIEGKLSQMS 250
gi|229396427_A/California/08/2 IEEKFEITGTMRKLADQSLPPNFPSLENFRAYVDGFEPNGCIEGKLSQMS 250
***********************.**************************

gi|237511877_A/Mexico/4603/200 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|237511887_A/Mexico/4482/200 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229484063_A/Canada-NS/RV153 KEVNAKIEPFLRTTPRPLKLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229892778_A/Canada-NS/RV153 KEVNAKIEPFLRTTPRPLKLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|237624325_A/swine/Alberta/O KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|227831785_A/California/06/2 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|227831770_A/California/05/2 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229536083_A/Indiana/09/2009 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229783410_A/New_York/1682/2 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229783389_A/New_York/1669/2 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229892772_A/Canada-NS/RV153 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|237511881_A/Mexico/4486/200 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|237511889_A/Mexico/4108/200 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|237511879_A/Mexico/4604/200 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229892776_A/Canada-AB/RV153 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229892782_A/Canada-ON/RV152 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229892774_A/Canada-ON/RV152 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229892780_A/Mexico/InDRE411 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229535826_A/California/14/2 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229536113_A/Michigan/02/200 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229536127_A/New_York/13/200 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229535979_A/Texas/08/2009 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229535808_A/Texas/09/2009 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229484067_A/Canada-ON/RV152 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229484065_A/Mexico/InDRE448 KEVNAKIEPFLRTTPRPLRLPDGPICHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229396441_A/New_York/10/200 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229396379_A/New_York/11/200 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229396455_A/New_York/15/200 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229396397_A/New_York/18/200 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229396408_A/New_York/31/200 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229396485_A/New_York/19/200 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229396502_A/Ohio/07/2009 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|227977134_A/Texas/04/2009 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229299530_A/Texas/04/2009 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|227831799_A/Texas/05/2009 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229299510_A/Texas/05/2009 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|227977170_A/California/07/2 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|227977146_A/California/07/2 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|227831815_A/California/07/2 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|227977114_A/California/04/2 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|227809828_A/California/04/2 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
gi|229396427_A/California/08/2 KEVNAKIEPFLRTTPRPLRLPDGPLCHQRSKFLLMDALKLSIEDPSHEGE 300
******************:*****:*************************

gi|237511877_A/Mexico/4603/200 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|237511887_A/Mexico/4482/200 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229484063_A/Canada-NS/RV153 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229892778_A/Canada-NS/RV153 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|237624325_A/swine/Alberta/O GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|227831785_A/California/06/2 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|227831770_A/California/05/2 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229536083_A/Indiana/09/2009 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229783410_A/New_York/1682/2 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229783389_A/New_York/1669/2 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229892772_A/Canada-NS/RV153 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|237511881_A/Mexico/4486/200 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|237511889_A/Mexico/4108/200 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|237511879_A/Mexico/4604/200 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229892776_A/Canada-AB/RV153 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229892782_A/Canada-ON/RV152 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229892774_A/Canada-ON/RV152 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229892780_A/Mexico/InDRE411 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229535826_A/California/14/2 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229536113_A/Michigan/02/200 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229536127_A/New_York/13/200 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229535979_A/Texas/08/2009 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229535808_A/Texas/09/2009 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229484067_A/Canada-ON/RV152 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229484065_A/Mexico/InDRE448 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229396441_A/New_York/10/200 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229396379_A/New_York/11/200 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229396455_A/New_York/15/200 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229396397_A/New_York/18/200 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229396408_A/New_York/31/200 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229396485_A/New_York/19/200 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229396502_A/Ohio/07/2009 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|227977134_A/Texas/04/2009 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229299530_A/Texas/04/2009 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|227831799_A/Texas/05/2009 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229299510_A/Texas/05/2009 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|227977170_A/California/07/2 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|227977146_A/California/07/2 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|227831815_A/California/07/2 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|227977114_A/California/04/2 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|227809828_A/California/04/2 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
gi|229396427_A/California/08/2 GIPLYDAIKCMKTFFGWKEPNIVKPHEKGINPNYLMAWKQVLAELQDIEN 350
**************************************************

gi|237511877_A/Mexico/4603/200 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|237511887_A/Mexico/4482/200 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229484063_A/Canada-NS/RV153 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229892778_A/Canada-NS/RV153 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|237624325_A/swine/Alberta/O EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|227831785_A/California/06/2 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|227831770_A/California/05/2 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229536083_A/Indiana/09/2009 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229783410_A/New_York/1682/2 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229783389_A/New_York/1669/2 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229892772_A/Canada-NS/RV153 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|237511881_A/Mexico/4486/200 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|237511889_A/Mexico/4108/200 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|237511879_A/Mexico/4604/200 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229892776_A/Canada-AB/RV153 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229892782_A/Canada-ON/RV152 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229892774_A/Canada-ON/RV152 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229892780_A/Mexico/InDRE411 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229535826_A/California/14/2 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229536113_A/Michigan/02/200 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229536127_A/New_York/13/200 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229535979_A/Texas/08/2009 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229535808_A/Texas/09/2009 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229484067_A/Canada-ON/RV152 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229484065_A/Mexico/InDRE448 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229396441_A/New_York/10/200 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229396379_A/New_York/11/200 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229396455_A/New_York/15/200 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229396397_A/New_York/18/200 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229396408_A/New_York/31/200 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229396485_A/New_York/19/200 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229396502_A/Ohio/07/2009 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|227977134_A/Texas/04/2009 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229299530_A/Texas/04/2009 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|227831799_A/Texas/05/2009 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229299510_A/Texas/05/2009 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|227977170_A/California/07/2 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|227977146_A/California/07/2 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|227831815_A/California/07/2 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|227977114_A/California/04/2 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|227809828_A/California/04/2 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
gi|229396427_A/California/08/2 EEKIPRTKNMKRTSQLKWALGENMAPEKVDFDDCKDVGDLKQYDSDEPEP 400
**************************************************

gi|237511877_A/Mexico/4603/200 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|237511887_A/Mexico/4482/200 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229484063_A/Canada-NS/RV153 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229892778_A/Canada-NS/RV153 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|237624325_A/swine/Alberta/O RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|227831785_A/California/06/2 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|227831770_A/California/05/2 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229536083_A/Indiana/09/2009 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229783410_A/New_York/1682/2 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229783389_A/New_York/1669/2 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229892772_A/Canada-NS/RV153 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|237511881_A/Mexico/4486/200 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|237511889_A/Mexico/4108/200 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|237511879_A/Mexico/4604/200 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229892776_A/Canada-AB/RV153 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229892782_A/Canada-ON/RV152 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229892774_A/Canada-ON/RV152 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229892780_A/Mexico/InDRE411 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229535826_A/California/14/2 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229536113_A/Michigan/02/200 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229536127_A/New_York/13/200 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229535979_A/Texas/08/2009 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229535808_A/Texas/09/2009 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229484067_A/Canada-ON/RV152 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229484065_A/Mexico/InDRE448 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229396441_A/New_York/10/200 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229396379_A/New_York/11/200 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229396455_A/New_York/15/200 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229396397_A/New_York/18/200 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229396408_A/New_York/31/200 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229396485_A/New_York/19/200 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229396502_A/Ohio/07/2009 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|227977134_A/Texas/04/2009 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229299530_A/Texas/04/2009 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|227831799_A/Texas/05/2009 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229299510_A/Texas/05/2009 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|227977170_A/California/07/2 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|227977146_A/California/07/2 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|227831815_A/California/07/2 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|227977114_A/California/04/2 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|227809828_A/California/04/2 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
gi|229396427_A/California/08/2 RSLASWVQNEFNKACELTDSSWIELDEIGEDVAPIEHIASMRRNYFTAEV 450
**************************************************

gi|237511877_A/Mexico/4603/200 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|237511887_A/Mexico/4482/200 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229484063_A/Canada-NS/RV153 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229892778_A/Canada-NS/RV153 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|237624325_A/swine/Alberta/O SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|227831785_A/California/06/2 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|227831770_A/California/05/2 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229536083_A/Indiana/09/2009 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229783410_A/New_York/1682/2 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229783389_A/New_York/1669/2 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229892772_A/Canada-NS/RV153 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|237511881_A/Mexico/4486/200 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|237511889_A/Mexico/4108/200 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|237511879_A/Mexico/4604/200 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229892776_A/Canada-AB/RV153 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229892782_A/Canada-ON/RV152 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229892774_A/Canada-ON/RV152 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229892780_A/Mexico/InDRE411 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229535826_A/California/14/2 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229536113_A/Michigan/02/200 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229536127_A/New_York/13/200 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229535979_A/Texas/08/2009 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229535808_A/Texas/09/2009 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229484067_A/Canada-ON/RV152 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229484065_A/Mexico/InDRE448 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229396441_A/New_York/10/200 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229396379_A/New_York/11/200 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229396455_A/New_York/15/200 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229396397_A/New_York/18/200 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229396408_A/New_York/31/200 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229396485_A/New_York/19/200 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229396502_A/Ohio/07/2009 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|227977134_A/Texas/04/2009 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229299530_A/Texas/04/2009 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|227831799_A/Texas/05/2009 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229299510_A/Texas/05/2009 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|227977170_A/California/07/2 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|227977146_A/California/07/2 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|227831815_A/California/07/2 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|227977114_A/California/04/2 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|227809828_A/California/04/2 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
gi|229396427_A/California/08/2 SHCRATEYIMKGVYINTALLNASCAAMDDFQLIPMISKCRTKEGRRKTNL 500
**************************************************

gi|237511877_A/Mexico/4603/200 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|237511887_A/Mexico/4482/200 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229484063_A/Canada-NS/RV153 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229892778_A/Canada-NS/RV153 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|237624325_A/swine/Alberta/O YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|227831785_A/California/06/2 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|227831770_A/California/05/2 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229536083_A/Indiana/09/2009 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229783410_A/New_York/1682/2 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229783389_A/New_York/1669/2 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229892772_A/Canada-NS/RV153 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|237511881_A/Mexico/4486/200 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|237511889_A/Mexico/4108/200 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|237511879_A/Mexico/4604/200 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229892776_A/Canada-AB/RV153 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229892782_A/Canada-ON/RV152 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229892774_A/Canada-ON/RV152 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229892780_A/Mexico/InDRE411 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229535826_A/California/14/2 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229536113_A/Michigan/02/200 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229536127_A/New_York/13/200 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229535979_A/Texas/08/2009 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229535808_A/Texas/09/2009 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229484067_A/Canada-ON/RV152 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229484065_A/Mexico/InDRE448 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229396441_A/New_York/10/200 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229396379_A/New_York/11/200 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229396455_A/New_York/15/200 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229396397_A/New_York/18/200 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229396408_A/New_York/31/200 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229396485_A/New_York/19/200 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229396502_A/Ohio/07/2009 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|227977134_A/Texas/04/2009 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229299530_A/Texas/04/2009 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|227831799_A/Texas/05/2009 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229299510_A/Texas/05/2009 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|227977170_A/California/07/2 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|227977146_A/California/07/2 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|227831815_A/California/07/2 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|227977114_A/California/04/2 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|227809828_A/California/04/2 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
gi|229396427_A/California/08/2 YGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLL 550
**************************************************

gi|237511877_A/Mexico/4603/200 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|237511887_A/Mexico/4482/200 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229484063_A/Canada-NS/RV153 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMELRRCLLQSLQQIESMIEAES 600
gi|229892778_A/Canada-NS/RV153 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMELRRCLLQSLQQIESMIEAES 600
gi|237624325_A/swine/Alberta/O RTAIGQVSRPMFLYVRTNGTSKIKMKWGMELRRCLLQSLQQIESMIEAES 600
gi|227831785_A/California/06/2 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMELRRCLLQSLQQIESMIEAES 600
gi|227831770_A/California/05/2 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMELRRCLLQSLQQIESMIEAES 600
gi|229536083_A/Indiana/09/2009 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMELRRCLLQSLQQIESMIEAES 600
gi|229783410_A/New_York/1682/2 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMELRRCLLQSLQQIESMIEAES 600
gi|229783389_A/New_York/1669/2 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMELRRCLLQSLQQIESMIEAES 600
gi|229892772_A/Canada-NS/RV153 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMELRRCLLQSLQQIESMIEAES 600
gi|237511881_A/Mexico/4486/200 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMELRRCLLQSLQQIESMIEAES 600
gi|237511889_A/Mexico/4108/200 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMELRRCLLQSLQQIESMIEAES 600
gi|237511879_A/Mexico/4604/200 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229892776_A/Canada-AB/RV153 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229892782_A/Canada-ON/RV152 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229892774_A/Canada-ON/RV152 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229892780_A/Mexico/InDRE411 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229535826_A/California/14/2 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229536113_A/Michigan/02/200 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229536127_A/New_York/13/200 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229535979_A/Texas/08/2009 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229535808_A/Texas/09/2009 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229484067_A/Canada-ON/RV152 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229484065_A/Mexico/InDRE448 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229396441_A/New_York/10/200 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229396379_A/New_York/11/200 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229396455_A/New_York/15/200 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229396397_A/New_York/18/200 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229396408_A/New_York/31/200 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229396485_A/New_York/19/200 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229396502_A/Ohio/07/2009 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|227977134_A/Texas/04/2009 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229299530_A/Texas/04/2009 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|227831799_A/Texas/05/2009 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229299510_A/Texas/05/2009 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|227977170_A/California/07/2 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|227977146_A/California/07/2 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|227831815_A/California/07/2 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|227977114_A/California/04/2 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|227809828_A/California/04/2 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
gi|229396427_A/California/08/2 RTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAES 600
******************************:*******************

gi|237511877_A/Mexico/4603/200 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|237511887_A/Mexico/4482/200 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229484063_A/Canada-NS/RV153 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229892778_A/Canada-NS/RV153 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|237624325_A/swine/Alberta/O SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|227831785_A/California/06/2 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|227831770_A/California/05/2 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229536083_A/Indiana/09/2009 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229783410_A/New_York/1682/2 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229783389_A/New_York/1669/2 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229892772_A/Canada-NS/RV153 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|237511881_A/Mexico/4486/200 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|237511889_A/Mexico/4108/200 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|237511879_A/Mexico/4604/200 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229892776_A/Canada-AB/RV153 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229892782_A/Canada-ON/RV152 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229892774_A/Canada-ON/RV152 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229892780_A/Mexico/InDRE411 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229535826_A/California/14/2 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229536113_A/Michigan/02/200 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229536127_A/New_York/13/200 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229535979_A/Texas/08/2009 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229535808_A/Texas/09/2009 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229484067_A/Canada-ON/RV152 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229484065_A/Mexico/InDRE448 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229396441_A/New_York/10/200 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229396379_A/New_York/11/200 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229396455_A/New_York/15/200 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229396397_A/New_York/18/200 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229396408_A/New_York/31/200 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229396485_A/New_York/19/200 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229396502_A/Ohio/07/2009 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|227977134_A/Texas/04/2009 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229299530_A/Texas/04/2009 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|227831799_A/Texas/05/2009 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229299510_A/Texas/05/2009 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|227977170_A/California/07/2 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|227977146_A/California/07/2 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|227831815_A/California/07/2 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|227977114_A/California/04/2 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|227809828_A/California/04/2 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
gi|229396427_A/California/08/2 SVKEKDMTKEFFENKSETWPIGESPRGVEEGSIGKVCRTLLAKSVFNSLY 650
**************************************************

gi|237511877_A/Mexico/4603/200 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|237511887_A/Mexico/4482/200 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229484063_A/Canada-NS/RV153 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229892778_A/Canada-NS/RV153 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|237624325_A/swine/Alberta/O ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|227831785_A/California/06/2 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|227831770_A/California/05/2 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229536083_A/Indiana/09/2009 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229783410_A/New_York/1682/2 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229783389_A/New_York/1669/2 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229892772_A/Canada-NS/RV153 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|237511881_A/Mexico/4486/200 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|237511889_A/Mexico/4108/200 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|237511879_A/Mexico/4604/200 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229892776_A/Canada-AB/RV153 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229892782_A/Canada-ON/RV152 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229892774_A/Canada-ON/RV152 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229892780_A/Mexico/InDRE411 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229535826_A/California/14/2 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229536113_A/Michigan/02/200 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229536127_A/New_York/13/200 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229535979_A/Texas/08/2009 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229535808_A/Texas/09/2009 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229484067_A/Canada-ON/RV152 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229484065_A/Mexico/InDRE448 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229396441_A/New_York/10/200 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229396379_A/New_York/11/200 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229396455_A/New_York/15/200 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229396397_A/New_York/18/200 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229396408_A/New_York/31/200 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229396485_A/New_York/19/200 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229396502_A/Ohio/07/2009 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|227977134_A/Texas/04/2009 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229299530_A/Texas/04/2009 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|227831799_A/Texas/05/2009 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229299510_A/Texas/05/2009 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|227977170_A/California/07/2 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|227977146_A/California/07/2 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|227831815_A/California/07/2 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|227977114_A/California/04/2 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|227809828_A/California/04/2 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
gi|229396427_A/California/08/2 ASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWV 700
**************************************************

gi|237511877_A/Mexico/4603/200 LLNASWFNSFLTHALK 716
gi|237511887_A/Mexico/4482/200 LLNASWFNSFLTHALK 716
gi|229484063_A/Canada-NS/RV153 LLNASWFNSFLTHALK 716
gi|229892778_A/Canada-NS/RV153 LLNASWFNSFLTHALK 716
gi|237624325_A/swine/Alberta/O LPNASWFNSFLTHALK 716
gi|227831785_A/California/06/2 LLNASWFNSFLTHALK 716
gi|227831770_A/California/05/2 LLNASWFNSFLTHALK 716
gi|229536083_A/Indiana/09/2009 LLNASWFNSFLTHALK 716
gi|229783410_A/New_York/1682/2 LLNASWFNSFLTHALK 716
gi|229783389_A/New_York/1669/2 LLNASWFNSFLTHALK 716
gi|229892772_A/Canada-NS/RV153 LLNASWFNSFLTHALK 716
gi|237511881_A/Mexico/4486/200 LLNASWFNSFLTHALK 716
gi|237511889_A/Mexico/4108/200 LLNASWFNSFLTHALK 716
gi|237511879_A/Mexico/4604/200 LLNASWFNSFLTHALK 716
gi|229892776_A/Canada-AB/RV153 LLNASWFNSFLTHALK 716
gi|229892782_A/Canada-ON/RV152 LLNASWFNSFLTHALK 716
gi|229892774_A/Canada-ON/RV152 LLNASWFNSFLTHALK 716
gi|229892780_A/Mexico/InDRE411 LLNASWFNSFLTHALK 716
gi|229535826_A/California/14/2 LLNASWFNSFLTHALK 716
gi|229536113_A/Michigan/02/200 LLNASWFNSFLTHALK 716
gi|229536127_A/New_York/13/200 LLNASWFNSFLTHALK 716
gi|229535979_A/Texas/08/2009 LLNASWFNSFLTHALK 716
gi|229535808_A/Texas/09/2009 LLNASWFNSFLTHALK 716
gi|229484067_A/Canada-ON/RV152 LLNASWFNSFLTHALK 716
gi|229484065_A/Mexico/InDRE448 LLNASWFNSFLTHALK 716
gi|229396441_A/New_York/10/200 LLNASWFNSFLTHALK 716
gi|229396379_A/New_York/11/200 LLNASWFNSFLTHALK 716
gi|229396455_A/New_York/15/200 LLNASWFNSFLTHALK 716
gi|229396397_A/New_York/18/200 LLNASWFNSFLTHALK 716
gi|229396408_A/New_York/31/200 LLNASWFNSFLTHALK 716
gi|229396485_A/New_York/19/200 LLNASWFNSFLTHALK 716
gi|229396502_A/Ohio/07/2009 LLNASWFNSFLTHALK 716
gi|227977134_A/Texas/04/2009 LLNASWFNSFLTHALK 716
gi|229299530_A/Texas/04/2009 LLNASWFNSFLTHALK 716
gi|227831799_A/Texas/05/2009 LLNASWFNSFLTHALK 716
gi|229299510_A/Texas/05/2009 LLNASWFNSFLTHALK 716
gi|227977170_A/California/07/2 LLNASWFNSFLTHALK 716
gi|227977146_A/California/07/2 LLNASWFNSFLTHALK 716
gi|227831815_A/California/07/2 LLNASWFNSFLTHALK 716
gi|227977114_A/California/04/2 LLNASWFNSFLTHALK 716
gi|227809828_A/California/04/2 LLNASWFNSFLTHALK 716
gi|229396427_A/California/08/2 LLNASWFNSFLTHALK 716
</pre> * **************

User:Michael Strong/H1N1/PA/MSA - Revision history

Michael Strong at 20:17, 15 May 2009

Michael Strong at 20:10, 15 May 2009

Michael Strong at 20:09, 15 May 2009

Michael Strong: New page: == H1N1 Swine Flu Multiple Sequence Alignment of PA Protein, 42 sequences== {| class="wikitable" |Protein |Polymorphism |Strain with Polymorphism |Number of Strains with Polymorphism |---...

←Older revision		Revision as of 20:17, 15 May 2009
Line 39:		Line 39:
	\|----		\|----
	\|}		\|}
		+
		+	<scene name='User:Michael_Strong/H1N1/PA/MSA/All/3'>All Polymorphisms</scene>

	<pre>		<pre>

←Older revision		Revision as of 20:10, 15 May 2009
Line 18:		Line 18:
	\|gi\|229484063_A/Canada-NS/RV153		\|gi\|229484063_A/Canada-NS/RV153
	\|2		\|2
-	\|<scene name='User:Michael_Strong/H1N1/PA/MSA/269/2'>~~TextToBeDisplayed~~</scene>	+	\|<scene name='User:Michael_Strong/H1N1/PA/MSA/269/2'>269</scene>
	\|----		\|----
	\|PA		\|PA
Line 36:		Line 36:
	\|gi\|237624325_A/swine/Alberta/O		\|gi\|237624325_A/swine/Alberta/O
	\|1		\|1
-	\|<scene name='User:Michael_Strong/H1N1/PA/MSA/702/1'>~~TextToBeDisplayed~~</scene>	+	\|<scene name='User:Michael_Strong/H1N1/PA/MSA/702/1'>702</scene>
	\|----		\|----
	\|}		\|}

←Older revision		Revision as of 20:09, 15 May 2009
Line 1:		Line 1:
	== H1N1 Swine Flu Multiple Sequence Alignment of PA Protein, 42 sequences==		== H1N1 Swine Flu Multiple Sequence Alignment of PA Protein, 42 sequences==
		+
		+	<applet load='MSPA1.pdb' size='300' frame='true' align='center' caption='PA Homology Model, Mexico Strain, A/Mexico/InDRE4487/2009, residues 257-716, 97% sequence identity to pdp template [http://proteopedia.org/wiki/index.php/3cm8 3cm8]' scene ='User:Michael_Strong/H1N1/PA/MSA/1/1'/>

	{\| class="wikitable"		{\| class="wikitable"
Line 16:		Line 18:
	\|gi\|229484063_A/Canada-NS/RV153		\|gi\|229484063_A/Canada-NS/RV153
	\|2		\|2
		+	\|<scene name='User:Michael_Strong/H1N1/PA/MSA/269/2'>TextToBeDisplayed</scene>
	\|----		\|----
	\|PA		\|PA
Line 21:		Line 24:
	\|gi\|229484065_A/Mexico/InDRE448		\|gi\|229484065_A/Mexico/InDRE448
	\|all others		\|all others
		+	\|<scene name='User:Michael_Strong/H1N1/PA/MSA/275/3'>275</scene>
	\|----		\|----
	\|PA		\|PA
Line 26:		Line 30:
	\|gi\|237511889_A/Mexico/4108/200		\|gi\|237511889_A/Mexico/4108/200
	\|11		\|11
		+	\|<scene name='User:Michael_Strong/H1N1/PA/MSA/581/2'>581</scene>
	\|----		\|----
	\|PA		\|PA
Line 31:		Line 36:
	\|gi\|237624325_A/swine/Alberta/O		\|gi\|237624325_A/swine/Alberta/O
	\|1		\|1
		+	\|<scene name='User:Michael_Strong/H1N1/PA/MSA/702/1'>TextToBeDisplayed</scene>
	\|----		\|----
	\|}		\|}