User:Wayne Decatur/SecStrFadeIn - Revision history

Wayne Decatur: add see also section

Wayne Decatur — Tue, 29 Dec 2020 22:36:36 GMT

add see also section

Wayne Decatur — Fri, 08 May 2020 00:15:27 GMT

←Older revision		Revision as of 00:15, 8 May 2020
Line 2:		Line 2:
	==Constructing animation==		==Constructing animation==
	<Structure load='Insert PDB code or filename here' size='350' frame='true' align='right' caption='.' scene='60/607777/Surf_test/1' pspeed='8' />		<Structure load='Insert PDB code or filename here' size='350' frame='true' align='right' caption='.' scene='60/607777/Surf_test/1' pspeed='8' />
-
-	<ref>PMID:3023912</ref>
-	<ref name="1cts">PMID:7120407</ref>
-	<ref>PMID: 2337600</ref>
-	<ref>PMID:7308213</ref>
-	<ref>PMID:17615299</ref>

	<scene name='60/609822/1dtg_ball_stick_label/1'>1dtg ball and stick - STARTING SCENE</scene>		<scene name='60/609822/1dtg_ball_stick_label/1'>1dtg ball and stick - STARTING SCENE</scene>

Wayne Decatur — Fri, 08 May 2020 00:14:08 GMT

tes pmids

←Older revision		Revision as of 00:14, 8 May 2020
Line 119:		Line 119:
	== Extras ==		== Extras ==
	{{Link Toggle FancyCartoonHighQualityView}}		{{Link Toggle FancyCartoonHighQualityView}}
		+
		+
		+	== References ==
		+	<references/>

Wayne Decatur — Fri, 08 May 2020 00:13:44 GMT

←Older revision		Revision as of 00:13, 8 May 2020
Line 3:		Line 3:
	<Structure load='Insert PDB code or filename here' size='350' frame='true' align='right' caption='.' scene='60/607777/Surf_test/1' pspeed='8' />		<Structure load='Insert PDB code or filename here' size='350' frame='true' align='right' caption='.' scene='60/607777/Surf_test/1' pspeed='8' />

		+	<ref>PMID:3023912</ref>
		+	<ref name="1cts">PMID:7120407</ref>
		+	<ref>PMID: 2337600</ref>
		+	<ref>PMID:7308213</ref>
		+	<ref>PMID:17615299</ref>

	<scene name='60/609822/1dtg_ball_stick_label/1'>1dtg ball and stick - STARTING SCENE</scene>		<scene name='60/609822/1dtg_ball_stick_label/1'>1dtg ball and stick - STARTING SCENE</scene>
Line 114:		Line 119:
	== Extras ==		== Extras ==
	{{Link Toggle FancyCartoonHighQualityView}}		{{Link Toggle FancyCartoonHighQualityView}}
-
-	== References ==
-	<references/>

Wayne Decatur — Sat, 22 Nov 2014 04:52:26 GMT

←Older revision		Revision as of 04:52, 22 November 2014
Line 70:		Line 70:
	delay 4.0;		delay 4.0;
	echo "The repeating patterns of the secondary structure\|elements are starting to be noticeable.";		echo "The repeating patterns of the secondary structure\|elements are starting to be noticeable.";
-	delay 2.0;	+	delay 3.0;
	select protein;		select protein;
	echo "To help with observing the patterns,\|a tube tracing the backbone is revealed. ";		echo "To help with observing the patterns,\|a tube tracing the backbone is revealed. ";
Line 80:		Line 80:
	color cartoon structure;		color cartoon structure;
	var d = [0.55,0.5,0.4,0.2, 0.1,0.05,0.01]; for(var m IN d) { var n = 0.56 - m;cartoon @n; color cartoon translucent @n; trace @m; delay 0.4;};		var d = [0.55,0.5,0.4,0.2, 0.1,0.05,0.01]; for(var m IN d) { var n = 0.56 - m;cartoon @n; color cartoon translucent @n; trace @m; delay 0.4;};
-	trace off; delay 0.1; color cartoon translucent 0; cartoon on;	+	trace off; delay 0.15; color cartoon translucent 0; cartoon on;
	</script>		</script>
	<text>Added 4th part of progression from all atoms to cartoon</text>		<text>Added 4th part of progression from all atoms to cartoon</text>

Wayne Decatur — Sat, 22 Nov 2014 04:50:00 GMT

←Older revision		Revision as of 04:50, 22 November 2014
Line 80:		Line 80:
	color cartoon structure;		color cartoon structure;
	var d = [0.55,0.5,0.4,0.2, 0.1,0.05,0.01]; for(var m IN d) { var n = 0.56 - m;cartoon @n; color cartoon translucent @n; trace @m; delay 0.4;};		var d = [0.55,0.5,0.4,0.2, 0.1,0.05,0.01]; for(var m IN d) { var n = 0.56 - m;cartoon @n; color cartoon translucent @n; trace @m; delay 0.4;};
-	trace off delay 0.1 color cartoon translucent 0; cartoon on;	+	trace off; delay 0.1; color cartoon translucent 0; cartoon on;
	</script>		</script>
	<text>Added 4th part of progression from all atoms to cartoon</text>		<text>Added 4th part of progression from all atoms to cartoon</text>

Wayne Decatur — Sat, 22 Nov 2014 04:47:38 GMT

←Older revision		Revision as of 04:47, 22 November 2014
Line 79:		Line 79:
	echo "Finally fade in typical representation and\|coloring of the secondary structure. ";		echo "Finally fade in typical representation and\|coloring of the secondary structure. ";
	color cartoon structure;		color cartoon structure;
-	var d = [0.55,0.5,0.4,0.2, 0.1,0.05,0.01]; for(var m IN d) { var n = 0.56 - m;cartoon @n; color cartoon translucent; trace @m; delay 0.4;};	+	var d = [0.55,0.5,0.4,0.2, 0.1,0.05,0.01]; for(var m IN d) { var n = 0.56 - m;cartoon @n; color cartoon translucent @n; trace @m; delay 0.4;};
-	trace off delay 0.1 color; cartoon translucent 0; cartoon on;	+	trace off delay 0.1 color cartoon translucent 0; cartoon on;
	</script>		</script>
	<text>Added 4th part of progression from all atoms to cartoon</text>		<text>Added 4th part of progression from all atoms to cartoon</text>

Wayne Decatur — Sat, 22 Nov 2014 04:45:28 GMT

←Older revision		Revision as of 04:45, 22 November 2014
Line 80:		Line 80:
	color cartoon structure;		color cartoon structure;
	var d = [0.55,0.5,0.4,0.2, 0.1,0.05,0.01]; for(var m IN d) { var n = 0.56 - m;cartoon @n; color cartoon translucent; trace @m; delay 0.4;};		var d = [0.55,0.5,0.4,0.2, 0.1,0.05,0.01]; for(var m IN d) { var n = 0.56 - m;cartoon @n; color cartoon translucent; trace @m; delay 0.4;};
-	trace off delay 0.1;; cartoon on;	+	trace off delay 0.1 color; cartoon translucent 0; cartoon on;
	</script>		</script>
	<text>Added 4th part of progression from all atoms to cartoon</text>		<text>Added 4th part of progression from all atoms to cartoon</text>

Wayne Decatur — Sat, 22 Nov 2014 04:43:20 GMT

←Older revision		Revision as of 04:43, 22 November 2014
Line 79:		Line 79:
	echo "Finally fade in typical representation and\|coloring of the secondary structure. ";		echo "Finally fade in typical representation and\|coloring of the secondary structure. ";
	color cartoon structure;		color cartoon structure;
-	var d = [0.55,0.5,0.4,0.2, 0.1,0.05,0.01]; for(var m IN d) { var n = 0.56 - m; cartoon @n; trace @m; delay 0.4;};	+	var d = [0.55,0.5,0.4,0.2, 0.1,0.05,0.01]; for(var m IN d) { var n = 0.56 - m;cartoon @n; color cartoon translucent; trace @m; delay 0.4;};
-	trace off; cartoon on;	+	trace off delay 0.1;; cartoon on;
	</script>		</script>
	<text>Added 4th part of progression from all atoms to cartoon</text>		<text>Added 4th part of progression from all atoms to cartoon</text>

Wayne Decatur — Sat, 22 Nov 2014 04:30:08 GMT

←Older revision		Revision as of 04:30, 22 November 2014
Line 77:		Line 77:
	var c = [0.55,0.5,0.4,0.2, 0.1,0.05,0.01]; for(var k IN c) {spacefill @k; wireframe @k; delay 0.4;};		var c = [0.55,0.5,0.4,0.2, 0.1,0.05,0.01]; for(var k IN c) {spacefill @k; wireframe @k; delay 0.4;};
	wireframe off; spacefill off;		wireframe off; spacefill off;
-	echo "Finally fade in typical representation and coloring of the secondary structure. ";	+	echo "Finally fade in typical representation and\|coloring of the secondary structure. ";
	color cartoon structure;		color cartoon structure;
-	var d = [0.55,0.5,0.4,0.2, 0.1,0.05,0.01]; for(var m IN d) { trace @m; delay 0.4;};	+	var d = [0.55,0.5,0.4,0.2, 0.1,0.05,0.01]; for(var m IN d) { var n = 0.56 - m; cartoon @n; trace @m; delay 0.4;};
	trace off; cartoon on;		trace off; cartoon on;
	</script>		</script>