This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2xgd
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| + | |||
==CRYSTAL STRUCTURE OF A DESIGNED HOMODIMERIC VARIANT T-A(L)A(L) OF THE TETRACYCLINE REPRESSOR== | ==CRYSTAL STRUCTURE OF A DESIGNED HOMODIMERIC VARIANT T-A(L)A(L) OF THE TETRACYCLINE REPRESSOR== | ||
<StructureSection load='2xgd' size='340' side='right' caption='[[2xgd]], [[Resolution|resolution]] 2.25Å' scene=''> | <StructureSection load='2xgd' size='340' side='right' caption='[[2xgd]], [[Resolution|resolution]] 2.25Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2xgd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2xgd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XGD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2XGD FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1a6i|1a6i]], [[2x6o|2x6o]], [[1qpi|1qpi]], [[1bjz|1bjz]], [[2x9d|2x9d]], [[2vke|2vke]], [[1du7|1du7]], [[2trt|2trt]], [[2vkv|2vkv]], [[2xb5|2xb5]], [[1ork|1ork]], [[1bj0|1bj0]], [[1bjy|1bjy]], [[2tct|2tct]], [[2xgc|2xgc]], [[2xge|2xge]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1a6i|1a6i]], [[2x6o|2x6o]], [[1qpi|1qpi]], [[1bjz|1bjz]], [[2x9d|2x9d]], [[2vke|2vke]], [[1du7|1du7]], [[2trt|2trt]], [[2vkv|2vkv]], [[2xb5|2xb5]], [[1ork|1ork]], [[1bj0|1bj0]], [[1bjy|1bjy]], [[2tct|2tct]], [[2xgc|2xgc]], [[2xge|2xge]]</td></tr> | ||
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xgd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xgd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2xgd RCSB], [http://www.ebi.ac.uk/pdbsum/2xgd PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2xgd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xgd OCA], [http://pdbe.org/2xgd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2xgd RCSB], [http://www.ebi.ac.uk/pdbsum/2xgd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2xgd ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| Line 17: | Line 18: | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2xgd ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
| Line 27: | Line 28: | ||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
| + | <div class="pdbe-citations 2xgd" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
| Line 34: | Line 36: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Bacillus coli migula 1895]] |
[[Category: Muller, Y A]] | [[Category: Muller, Y A]] | ||
[[Category: Richter, J P]] | [[Category: Richter, J P]] | ||
Revision as of 21:54, 5 August 2016
CRYSTAL STRUCTURE OF A DESIGNED HOMODIMERIC VARIANT T-A(L)A(L) OF THE TETRACYCLINE REPRESSOR
| |||||||||||
