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1j1s

From Proteopedia

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[[Image:1j1s.gif|left|200px]]
 
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{{Structure
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==Pokeweed Antiviral Protein from Seeds (PAP-S1) Complexed with Formycin==
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|PDB= 1j1s |SIZE=350|CAPTION= <scene name='initialview01'>1j1s</scene>, resolution 2.00&Aring;
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<StructureSection load='1j1s' size='340' side='right'caption='[[1j1s]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene> and <scene name='pdbligand=FMP:FORMYCIN-5&#39;-MONOPHOSPHATE'>FMP</scene>
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<table><tr><td colspan='2'>[[1j1s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Phytolacca_americana Phytolacca americana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J1S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J1S FirstGlance]. <br>
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|ACTIVITY= [http://en.wikipedia.org/wiki/rRNA_N-glycosylase rRNA N-glycosylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.22 3.2.2.22]
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMP:FORMYCIN-5-MONOPHOSPHATE'>FMP</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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}}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j1s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j1s OCA], [https://pdbe.org/1j1s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j1s RCSB], [https://www.ebi.ac.uk/pdbsum/1j1s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j1s ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RIPS_PHYAM RIPS_PHYAM] Inhibits viral infection of plants, and protein synthesis in vitro.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j1/1j1s_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j1s ConSurf].
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<div style="clear:both"></div>
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'''Pokeweed Antiviral Protein from Seeds (PAP-S1) Complexed with Formycin'''
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==See Also==
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*[[Ribosome inactivating protein 3D structures|Ribosome inactivating protein 3D structures]]
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__TOC__
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==About this Structure==
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</StructureSection>
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1J1S is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Phytolacca_americana Phytolacca americana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J1S OCA].
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[[Category: Large Structures]]
[[Category: Phytolacca americana]]
[[Category: Phytolacca americana]]
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[[Category: Single protein]]
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[[Category: Fujii H]]
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[[Category: rRNA N-glycosylase]]
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[[Category: Hidaka A]]
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[[Category: Fujii, H.]]
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[[Category: Honjo E]]
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[[Category: Hidaka, A.]]
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[[Category: Kurokawa H]]
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[[Category: Honjo, E.]]
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[[Category: Mikami B]]
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[[Category: Kurokawa, H.]]
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[[Category: Monzingo AF]]
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[[Category: Mikami, B.]]
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[[Category: Motoshima H]]
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[[Category: Monzingo, A F.]]
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[[Category: Robertus JD]]
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[[Category: Motoshima, H.]]
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[[Category: Sato E]]
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[[Category: Robertus, J D.]]
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[[Category: Watanabe K]]
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[[Category: Sato, E.]]
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[[Category: Watanabe, K.]]
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[[Category: FMP]]
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[[Category: NAG]]
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[[Category: n-glycosidase]]
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[[Category: pokeweed antiviral protein]]
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[[Category: ribosome-inactivating protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 23 12:17:26 2008''
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Current revision

Pokeweed Antiviral Protein from Seeds (PAP-S1) Complexed with Formycin

PDB ID 1j1s

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