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1j1s
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="1j1s" size="450" color="white" frame="true" align="right" spinBox="true" caption="1j1s, resolution 2.00Å" /> '''Pokeweed Antiviral P...) |
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| - | [[Image:1j1s.gif|left|200px]]<br /><applet load="1j1s" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1j1s, resolution 2.00Å" /> | ||
| - | '''Pokeweed Antiviral Protein from Seeds (PAP-S1) Complexed with Formycin'''<br /> | ||
| - | == | + | ==Pokeweed Antiviral Protein from Seeds (PAP-S1) Complexed with Formycin== |
| - | + | <StructureSection load='1j1s' size='340' side='right'caption='[[1j1s]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[1j1s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Phytolacca_americana Phytolacca americana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J1S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J1S FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
| - | [[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMP:FORMYCIN-5-MONOPHOSPHATE'>FMP</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j1s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j1s OCA], [https://pdbe.org/1j1s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j1s RCSB], [https://www.ebi.ac.uk/pdbsum/1j1s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j1s ProSAT]</span></td></tr> | |
| - | [ | + | </table> |
| - | + | == Function == | |
| - | + | [https://www.uniprot.org/uniprot/RIPS_PHYAM RIPS_PHYAM] Inhibits viral infection of plants, and protein synthesis in vitro. | |
| - | + | == Evolutionary Conservation == | |
| - | [ | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [ | + | Check<jmol> |
| - | [ | + | <jmolCheckbox> |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j1/1j1s_consurf.spt"</scriptWhenChecked> | |
| - | [[ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[ | + | </jmolCheckbox> |
| - | [ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j1s ConSurf]. |
| - | + | <div style="clear:both"></div> | |
| - | + | ==See Also== | |
| + | *[[Ribosome inactivating protein 3D structures|Ribosome inactivating protein 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Phytolacca americana]] | ||
| + | [[Category: Fujii H]] | ||
| + | [[Category: Hidaka A]] | ||
| + | [[Category: Honjo E]] | ||
| + | [[Category: Kurokawa H]] | ||
| + | [[Category: Mikami B]] | ||
| + | [[Category: Monzingo AF]] | ||
| + | [[Category: Motoshima H]] | ||
| + | [[Category: Robertus JD]] | ||
| + | [[Category: Sato E]] | ||
| + | [[Category: Watanabe K]] | ||
Current revision
Pokeweed Antiviral Protein from Seeds (PAP-S1) Complexed with Formycin
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Categories: Large Structures | Phytolacca americana | Fujii H | Hidaka A | Honjo E | Kurokawa H | Mikami B | Monzingo AF | Motoshima H | Robertus JD | Sato E | Watanabe K
