Sandbox7 Eric Martz

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<font color="red">Please do not edit this page. Thank you, [[User:Eric Martz]], June 2011.</font>
<font color="red">Please do not edit this page. Thank you, [[User:Eric Martz]], June 2011.</font>
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<Structure load='1d66' size='450' frame='true' align='right' caption='Insert caption here' scene='Sandbox7_Eric_Martz/Test1/1' />
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Proposed title: <span style="font-size:150%">Temperature vs. Resolution</span>
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<scene name='Sandbox7_Eric_Martz/Test1/1'>TextToBeDisplayed</scene>
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==1.4 &Aring;ngstroms [[Resolution]]==
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<scene name='Sandbox7_Eric_Martz/Test/1'>color key test from Test Acct 2</scene>
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<div style="float:left">
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<center>
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<span style="font-size:125%;">[[Resolution]] 2.0 &Aring;ngstroms</span><br>
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Min/Av/Max: [[Temperature values]]. Examples selected for low or high R/Rfree.
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</center>
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{| class="wikitable sortable"
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|-
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! [[PDB ID]] !! Deposition !! [[R value|R]] !! [[Free R|R free]] !! Min !! Av !! Max !! Notes
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|-
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| [[]] || || 0. || 0. || || || ||
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|}
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<nowiki>*</nowiki>SG: Structural Genomics.
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</div>
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<div style="float:right;margin-top:70px;" >
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{| class="wikitable"
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|+ Temperature values<br>for [[resolution]] 1.4 &Aring;
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|-
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! Column !! Range*** !! Average***<br>N=7
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|-
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| Min || 2-26 ||
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|-
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| Av || 12-45 ||
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|-
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| Max || 59-78 ||
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|}
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<nowiki>***</nowiki>Excludes outliers.
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</div>
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==2.0 &Aring;ngstroms [[Resolution]]==
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<scene name='Sandbox7_Eric_Martz/Test/2'>color key from EM</scene>
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2.1 &Aring;ngstroms is the median [[resolution]] in the [[Protein Data Bank]].
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<div style="float:left">
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Scenes made in Apple OS 10.7 Lion
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<center>
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*<scene name='Sandbox7_Eric_Martz/Test2/2'>TextToBeDisplayed</scene>
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<span style="font-size:125%;">[[Resolution]] 2.0 &Aring;ngstroms</span><br>
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*<scene name='Sandbox7_Eric_Martz/Test2/3'>TextToBeDisplayed</scene>
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Min/Av/Max: [[Temperature values]]. Examples selected for low or high R/Rfree.
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</center>
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(available)
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{| class="wikitable sortable"
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|-
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! [[PDB ID]] !! Deposition !! [[R value|R]] !! [[Free R|R free]] !! Min !! Av !! Max !! Notes
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|-
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| [[3nt6]] || 2010 || 0.124 || 0.155 || 2 || 36 || 78 ||
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|-
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| [[1tbt]] || 2004 || 0.130 || 0.184 || 7 || 21 || 59 ||
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|-
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| [[1qno]] || 1999 || 0.126 || 0.200 || 2 || 12 || 72 ||
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|-
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| [[1vra]] || 2005 ||0.141 || 0.158 || 11 || 30 || 64 || SG*
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|-style="color:gray;"
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|[[1yze]] || 2005 || 0.325 || 0.367 || 22 || 22 || 22 || Outlier
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|-
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| [[1m3y]] || 2002 || 0.342 || 0.352 || 16 || 34 || 67 ||
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|-style="color:gray;"
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| [[3d0m]] || 2008 || 0.295 || 0.361 || 30 || 62 || 130 || RNA, Outlier
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|-
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| [[2w2v]] || 2008 || 0.283 || 0.345 || 17 || 29 || 59 ||
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|-
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| [[3dvv]] || 2008 || 0.268 || 0.277 || 26 || 45 || 66 || RNA
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|}
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<nowiki>*</nowiki>SG: Structural Genomics.
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</div>
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<div style="float:right;margin-top:70px;" >
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{| class="wikitable"
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|+ Temperature values<br>for [[resolution]] 2.0 &Aring;
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|-
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! Column !! Range*** !! Average***<br>N=7
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|-
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| Min || 2-26 || 11.6
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|-
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| Av || 12-45 || 29.6
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|-
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| Max || 59-78 || 66.4
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|}
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<nowiki>***</nowiki>Excludes outliers.
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</div>
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{{Clear}}
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==Methods==
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At [[Temperature color schemes]] is a Jmol script that reports the min/av/max temperature values in a PDB file.
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Current revision

Please do not edit this page. Thank you, User:Eric Martz, June 2011.

Insert caption here

Drag the structure with the mouse to rotate

Scenes made in Apple OS 10.7 Lion

(available)

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