This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1jzv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:43, 7 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1jzv.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of a bulged RNA from the SL2 stem-loop of the HIV-1 psi-RNA==
-
|PDB= 1jzv |SIZE=350|CAPTION= <scene name='initialview01'>1jzv</scene>, resolution 1.7&Aring;
+
<StructureSection load='1jzv' size='340' side='right'caption='[[1jzv]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=5BU:5-BROMO-URIDINE-5&#39;-MONOPHOSPHATE'>5BU</scene>, <scene name='pdbligand=5IC:5-IODO-CYTIDINE-5&#39;-MONOPHOSPHATE'>5IC</scene>, <scene name='pdbligand=A:ADENOSINE-5&#39;-MONOPHOSPHATE'>A</scene>, <scene name='pdbligand=C:CYTIDINE-5&#39;-MONOPHOSPHATE'>C</scene>, <scene name='pdbligand=G:GUANOSINE-5&#39;-MONOPHOSPHATE'>G</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=U:URIDINE-5&#39;-MONOPHOSPHATE'>U</scene>
+
<table><tr><td colspan='2'>[[1jzv]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JZV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JZV FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5BU:5-BROMO-URIDINE-5-MONOPHOSPHATE'>5BU</scene>, <scene name='pdbligand=5IC:5-IODO-CYTIDINE-5-MONOPHOSPHATE'>5IC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jzv OCA], [https://pdbe.org/1jzv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jzv RCSB], [https://www.ebi.ac.uk/pdbsum/1jzv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jzv ProSAT]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jzv OCA], [http://www.ebi.ac.uk/pdbsum/1jzv PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1jzv RCSB]</span>
+
__TOC__
-
}}
+
</StructureSection>
-
 
+
[[Category: Large Structures]]
-
'''Crystal structure of a bulged RNA from the SL2 stem-loop of the HIV-1 psi-RNA'''
+
[[Category: Deng J]]
-
 
+
[[Category: Pan B]]
-
 
+
[[Category: Sudarsanakumar C]]
-
==About this Structure==
+
[[Category: Sundaralingam M]]
-
1JZV is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JZV OCA].
+
[[Category: Xiong Y]]
-
[[Category: Protein complex]]
+
-
[[Category: Deng, J.]]
+
-
[[Category: Pan, B.]]
+
-
[[Category: Sudarsanakumar, C.]]
+
-
[[Category: Sundaralingam, M.]]
+
-
[[Category: Xiong, Y.]]
+
-
[[Category: a-bulge]]
+
-
[[Category: a-rna]]
+
-
[[Category: hiv-1 sl2]]
+
-
[[Category: x-ray]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:41:22 2008''
+

Current revision

Crystal structure of a bulged RNA from the SL2 stem-loop of the HIV-1 psi-RNA

PDB ID 1jzv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1jzv"
Personal tools