Collagenase (non-MMP)
From Proteopedia
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'''Collagenase''' (Col) catalyzes the breaking of peptide bonds in collagen. Col cleaves pro-collagen to create collagen. Some collagenases are part of the [[Matrix metalloproteinase]] family. | '''Collagenase''' (Col) catalyzes the breaking of peptide bonds in collagen. Col cleaves pro-collagen to create collagen. Some collagenases are part of the [[Matrix metalloproteinase]] family. | ||
| + | *'''Collagenase G''' recognises and unravels collagen microfibrils into triple helices and unwind them<ref>PMID:21947205</ref>. | ||
| + | *'''Collagenase H''' targets collagen III<ref>PMID:23768818</ref>. | ||
== Relevance == | == Relevance == | ||
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</StructureSection> | </StructureSection> | ||
| - | == 3D Structures of collagenase == | ||
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| - | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | ||
| - | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
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| - | *Collagenase G | ||
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| - | **[[2y3u]], [[2y50]] – ChColG residues 119-880 – ''Clostridium histolycum''<br /> | ||
| - | **[[4are]] - ChColG residues 119-790<br /> | ||
| - | **[[2y6i]] - ChColG residues 119-880 + peptide<br /> | ||
| - | **[[4jrw]], [[4tn9]], [[4aqo]], [[2y72]] - ChColG PKD domain<br /> | ||
| - | **[[1nqj]] - ChColG CBD domain <br /> | ||
| - | **[[1nqd]], [[2o8o]], [[4hpk]], [[5iku]] - ChColG CBD domain + Ca<br /> | ||
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| - | *Collagenase H | ||
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| - | **[[4u6t]] - ChColH PKD domain<br /> | ||
| - | **[[4jgu]], [[4u7k]] - ChColH PKD domain + Ca<br /> | ||
| - | **[[3jqw]], [[3jqx]] - ChColH CBD domain + Ca<br /> | ||
| - | **[[4ar1]] – ChColH peptidase domain <br /> | ||
| - | **[[4arf]] – CtColH peptidase domain + peptide inhibitor <br /> | ||
| - | **[[5o7e]] – ColH peptidase domain + inhibitor – ''Hathewaya histolytica''<br /> | ||
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| - | *Collagenase T | ||
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| - | **[[4ar9]] – CtColT peptidase domain - ''Clostridium tetani''<br /> | ||
| - | **[[4ar8]] – CtColT peptidase domain + peptide inhibitor <br /> | ||
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| - | *Collagenase | ||
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| - | **[[1azz]] – Col + ecotin – fiddler crab<br /> | ||
| - | **[[1hyl]], [[2hlc]] – Col – ''Hypoderma lineatum''<br /> | ||
| - | **[[5sv5]] – Col C-terminal – ''Bacillus anthracis''<br /> | ||
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| - | *Collagenase 3 or matrix metalloproteinase 13 see [[Matrix metalloproteinase]] | ||
| - | }} | ||
== References == | == References == | ||
<references/> | <references/> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Current revision
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References
- ↑ Eckhard U, Schonauer E, Nuss D, Brandstetter H. Structure of collagenase G reveals a chew-and-digest mechanism of bacterial collagenolysis. Nat Struct Mol Biol. 2011 Sep 25;18(10):1109-14. doi: 10.1038/nsmb.2127. PMID:21947205 doi:10.1038/nsmb.2127
- ↑ Fujio A, Murayama K, Yamagata Y, Watanabe K, Imura T, Inagaki A, Ohbayashi N, Shima H, Sekiguchi S, Fujimori K, Igarashi K, Ohuchi N, Satomi S, Goto M. Collagenase H is crucial for isolation of rat pancreatic islets. Cell Transplant. 2014;23(10):1187-98. PMID:23768818 doi:10.3727/096368913X668654
- ↑ Eckhard U, Schonauer E, Brandstetter H. Structural basis for activity regulation and substrate preference of clostridial collagenases G, H, and T. J Biol Chem. 2013 May 23. PMID:23703618 doi:10.1074/jbc.M112.448548
