Endonuclease 3D structures
From Proteopedia
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**[[2gw6]] – hENN subunit sen15 – NMR<br /> | **[[2gw6]] – hENN subunit sen15 – NMR<br /> | ||
**[[6z9u]] – hENN subunits sen15+sen34<br /> | **[[6z9u]] – hENN subunits sen15+sen34<br /> | ||
| - | **[[7uxa]] – hENN + tRNA-Arg – Cryo EM<br /> | + | **[[7uxa]], [[8iss]] – hENN + tRNA-Arg – Cryo EM<br /> |
| + | **[[8hmy]], [[8hmz]] – hENN + tRNA + Clp1 – Cryo EM<br /> | ||
**[[1a79]], [[1a76]], [[1a77]] - MjENN – ''Methanocaldococcus jannaschii''<br /> | **[[1a79]], [[1a76]], [[1a77]] - MjENN – ''Methanocaldococcus jannaschii''<br /> | ||
**[[2cv8]] - ENN – ''Sulfolobus tokodaii''<br /> | **[[2cv8]] - ENN – ''Sulfolobus tokodaii''<br /> | ||
| - | **[[2gjw]] - AfENN + RNA –'' Archaeoglobus fulgidus''<br /> | + | **[[2gjw]] - AfENN + RNA – ''Archaeoglobus fulgidus''<br /> |
**[[1r0v]], [[1r11]] – AfENN | **[[1r0v]], [[1r11]] – AfENN | ||
**[[2ohc]], [[2ohe]] - TaENN – ''Thermoplasma acidophilum''<br /> | **[[2ohc]], [[2ohe]] - TaENN – ''Thermoplasma acidophilum''<br /> | ||
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**[[1ul1]] - hENN + PCNA <br /> | **[[1ul1]] - hENN + PCNA <br /> | ||
**[[6tnz]] - hENN in processive polymerase – Cryo EM <br /> | **[[6tnz]] - hENN in processive polymerase – Cryo EM <br /> | ||
| + | **[[8yjh]], [[8yjl]], [[8yjq]], [[8yjr]], [[8yjs]], [[8yju]], [[8yjv]], [[8yjw]], [[8yjz]] - hENN + PCNA + DNA – Cryo EM <br /> | ||
**[[7qo1]] - hENN + DNA ligase + PCNA + DNA – Cryo EM <br /> | **[[7qo1]] - hENN + DNA ligase + PCNA + DNA – Cryo EM <br /> | ||
**[[1mc8]] - PhENN (mutant) <br /> | **[[1mc8]] - PhENN (mutant) <br /> | ||
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**[[6yex]] – VcENN – ''Vibrio campbellii''<br /> | **[[6yex]] – VcENN – ''Vibrio campbellii''<br /> | ||
**[[6yjb]], [[6ykf]], [[6ymg]] – VcENN + DNA<br /> | **[[6yjb]], [[6ykf]], [[6ymg]] – VcENN + DNA<br /> | ||
| + | **[[8saj]] - ENN + major capsid protein – Mycobacterium phage – Cryo EM<br /> | ||
| + | **[[8z0l]] - ENN + cas8 + DNA – ''Selenomonas'' – Cryo EM<br /> | ||
*UV damage ENN | *UV damage ENN | ||
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**[[6vwb]] – hENN Mus81 N-terminal - NMR<br /> | **[[6vwb]] – hENN Mus81 N-terminal - NMR<br /> | ||
**[[2mc3]] – hENN Mus81 winged-helix domain - NMR<br /> | **[[2mc3]] – hENN Mus81 winged-helix domain - NMR<br /> | ||
| + | **[[9f98]] – hENN EME1 + Mus81 <br /> | ||
**[[4p0p]], [[4p0q]], [[4p0r]], [[4p0s]] – hENN EME1 + Mus81 + DNA<br /> | **[[4p0p]], [[4p0q]], [[4p0r]], [[4p0s]] – hENN EME1 + Mus81 + DNA<br /> | ||
| + | **[[9f9m]] – hENN EME1 + Mus81 + inhibitor<br /> | ||
**[[2kpf]] - mENN – mouse<br /> | **[[2kpf]] - mENN – mouse<br /> | ||
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**[[6ifc]] – StENN + Vapb – ''Salmonella typhimurium''<br /> | **[[6ifc]] – StENN + Vapb – ''Salmonella typhimurium''<br /> | ||
**[[6ifm]] – StENN + Vapb + DNA<br /> | **[[6ifm]] – StENN + Vapb + DNA<br /> | ||
| + | **[[9h6b]], [[9h6c]] – EcENN + Vapb <br /> | ||
| + | **[[9h6a]], [[9h6d]] – EcENN + antitoxin <br /> | ||
*Muts2 ENN | *Muts2 ENN | ||
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**[[5gkj]] – TkENN (mutant) – ''Thermococcus kodakarensis''<br /> | **[[5gkj]] – TkENN (mutant) – ''Thermococcus kodakarensis''<br /> | ||
**[[5gke]], [[5gkf]], [[5gkg]], [[5gkh]], [[5gki]] – TkENN (mutant) + DNA<br /> | **[[5gke]], [[5gkf]], [[5gkg]], [[5gkh]], [[5gki]] – TkENN (mutant) + DNA<br /> | ||
| + | |||
| + | *ENN GajA or GabijA protein | ||
| + | |||
| + | **[[8jq9]], [[8tk0]], [[6m3t]], [[6njt]] – BcENN – Cryo EM<br /> | ||
| + | **[[8wy5]], [[8x51]] – BcENN + DNA – Cryo EM<br /> | ||
| + | **[[8wy4]], [[8x5i]] – BcENN + ATP – Cryo EM<br /> | ||
| + | **[[8j4t]], [[8jqb]], [[8jqc]], [[8tjy]], [[8tk1]] – BcENN + GajB – Cryo EM<br /> | ||
| + | **[[8sm3]] – BcENN + GajB <br /> | ||
| + | **[[8x5n]] – BcENN + GajB + ATP – Cryo EM<br /> | ||
| + | **[[8u7i]], [[9a3w]] – BcENN + GajB + Gabija anti-defense 1 – Cryo EM<br /> | ||
*ENN G | *ENN G | ||
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**[[7cd5]], [[7cd6]] – mAPE1 + DNA<br /> | **[[7cd5]], [[7cd6]] – mAPE1 + DNA<br /> | ||
**[[6wcd]] – fAPE2 catalytic domain - frog<br /> | **[[6wcd]] – fAPE2 catalytic domain - frog<br /> | ||
| + | **[[8ka3]], [[8kaj]] – AtAPE + DNA<br /> | ||
*Restriction ENN Pfoi | *Restriction ENN Pfoi | ||
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*I-PpoI ENN | *I-PpoI ENN | ||
| - | **[[1a74]], [[1ipp]], [[1a73]], [[1cz0]] - PpENN + DNA – ''Physarum polycephalum''<br /> | + | **[[1a74]], [[1ipp]], [[1a73]], [[1cz0]], [[8vmo]], [[8vmp]], [[8vmq]], [[8vmr]], [[8vms]], [[8vmt]], [[8vmu]], [[8vmv]], [[8vmw]], [[8vmx]], [[8vmy]], [[8vmz]], [[8vn0]], [[8vn1]], [[8vn2]], [[8vn3]], [[8vn4]], [[8vn5]], [[8vn6]], [[8vn7]], [[8vn8]], [[8vn9]], [[8vna]], [[8vnb]], [[8vnc]], [[8vnd]], [[8vne]], [[8vnf]], [[8vng]], [[8vnh]], [[8vnj]], [[8vnk]], [[8vnl]], [[8vnm]], [[8vnn]], [[8vno]], [[8vnp]], [[8vnq]], [[8vnr]], [[8vns]], [[8vnt]], [[8vnu]] - PpENN + DNA – ''Physarum polycephalum''<br /> |
**[[1cyq]], [[1evw]], [[2o6m]] - PpENN (mutant) + DNA<br /> | **[[1cyq]], [[1evw]], [[2o6m]] - PpENN (mutant) + DNA<br /> | ||
**[[1evx]] - PpENN | **[[1evx]] - PpENN | ||
Current revision
3D structures of endonuclease
Updated on 26-May-2025
