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PilZ domain

The concept of PilZ Domains as c-di-GMP Effectors is supported by compelling bioinformatics analysis. PilZ domains, typically located at the C-terminus of cellulose synthetase, produced by the bcsA gene, have been proposed to act as effectors for the signaling molecule cyclic diguanylate monophosphate (c-di-GMP). The discovery that c-di-GMP functions as an allosteric regulator of cellulose synthetase in Gluconacetobacter xylinus, as demonstrated by Benziman and colleagues, represented a significant breakthrough in the field. Notably, the PilZ protein in Pseudomonas aeruginosa contains a single 118-residue domain exhibiting substantial sequence similarity to the C-terminus of BcsA. Within the pil operon, responsible for the synthesis and functionality of pili, PilZ is among the few proteins with an unknown function. This operon plays a role in the transition from motile to sessile growth modes, although the precise regulatory mechanisms remain elusive. Strains lacking the PilZ domain (ΔpilZ) can produce normal levels of pilin protomers but are unable to assemble functional pili. Furthermore, other PilZ-domain proteins have been implicated in the regulation of motility across various organisms. For instance, the YcgR protein in Escherichia coli and the DgrA and DgrB proteins in Caulobacter crescentus have demonstrated involvement in controlling motility under high cytosolic c-di-GMP concentrations. Notably, certain PilZ domains are situated at the C-terminus of proteins participating in processes sensitive to c-di-GMP levels. Alg44 from P. aeruginosa represents another example, functioning as an essential protein in the c-di-GMP-regulated process of alginate biosynthesis. These discoveries provide robust evidence supporting the hypothesis that the majority of PilZ domains function as effectors, binding c-di-GMP, and exerting a critical role in the regulation of various cellular processes.

Molecular Interaction

The PilZ domain is typically found in proteins associated with type IV pili and other c-di-GMP-regulated processes. When c-di-GMP is present in the bacterial cell, it can bind to the PilZ domain, leading to conformational changes in the protein structure. This conformational change can result in alterations in protein-protein interactions or changes in protein activity, ultimately affecting the downstream processes regulated by the PilZ-containing protein.

The binding of c-di-GMP to the PilZ domain is specific and occurs through conserved amino acid residues within the domain. The affinity and specificity of the interaction can vary among different PilZ-containing proteins, allowing for fine-tuning of c-di-GMP signaling in different bacterial species.

Function

Relevance

Structural highlights

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