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- Image:Overlay for Proteopedia.pdb (0 bytes)
- Image:5vkq proteopedia fig1.png (69 bytes)
- Image:5vkq proteopedia fig2.png (69 bytes)
- Image:Proteopedia Toolbar.png (0 bytes)
- Image:Proteopedia.doc (0 bytes)
- Proteopedia:Practical Guide to Advanced Proteopedia Authoring and Its Use in Teaching (16,838 bytes)
4: ...art C of a book chapter entitled '''Publishing in Proteopedia: The Guide''' by [[User:Jaime Prilusky|Jaime Pril...
6: ...rilusky, Wayne Decatur, Eric Martz. Publishing in Proteopedia: The Guide, Advancing Methods for Biomolecular Cr...
12: ...e myriad ways to further your skills in authoring Proteopedia content; however, none is probably more helpful t...
16: ..., see for examples [[Interactive 3D Complement in Proteopedia]].
29: Unless much of the content is already present in Proteopedia in some form, any content you produce may be usef... - Help:Copying FirstGlance Scenes into Proteopedia (5,677 bytes)
1: ... This page explains how to move those scenes into Proteopedia, attaching them to a green link.
8: ... search for the page titled with that PDB code in Proteopedia. At that page, click on the link to ''FirstGlance...
15: ...Turn off spinning (even if you want it to spin in Proteopedia), and orient and zoom the molecule as you want it...
30: 5. Edit the page in Proteopedia where you want to install the scene from FirstGla...
43: ...cking on controls. The scene was transferred into Proteopedia using the above procedure. - Image:Proteopedia mug.jpeg (136 bytes)
- Image:Proteopedia T-shirt.jpeg (141 bytes)
2: Proteopedia T-Shirt from http://www.cafepress.com/molviz4 - Proteopedia Page Contributors and Editors (1,834 bytes)
1: Proteopedia grows through an ongoing community effort.
3: The [[Proteopedia Page Contributors and Editors]] section contains ...
4: ...teopedia:About|MediaWiki software]] that operates Proteopedia, and occasionally may contain names of users whos...
8: ==Content Donors ''vs'' Proteopedia Page Contributors and Editors==
9: ...aluable work to the page, may have never seen the Proteopedia page itself. - Help:Teaching with Proteopedia (11,502 bytes)
1: ...Journal:BAMBEd:A practical guide to teaching with Proteopedia]]<ref>DOI:10.1002/bmb.21548</ref>.</big>
5: ...Pages]]. Specifically for biochemistry courses, [[Proteopedia:Biochemistry in 3D]] list pages that fit a one-se...
7: Proteopedia pages can be '''projected''' during lectures (if ...
11: ...stomizing molecular scenes is amazingly easy with Proteopedia's ''Scene Authoring Tool''. You can protect your ...
17: ... In contrast, simply assigning students to read a Proteopedia page may leave them less focused and perhaps unce... - User:Wayne Decatur/Teaching Proteopedia (4,464 bytes)
1: ==Proteopedia and Authoring Pages==
7: *[[Lac repressor|Lac repressor at Proteopedia]]
8: *''Proteopedia - a scientific 'wiki' bridging the rift between 3...
10: *[[Proteopedia:Topic Pages]]
11: *[[Lac repressor|Lac repressor at Proteopedia]] is an example of a topic page. - Image:MO ex proteopedia.png (273 bytes)
- Image:HIV for Proteopedia.JPG (0 bytes)
- Help:How to Insert a ConSurf Result Into a Proteopedia Green Link (4,126 bytes)
4: Articles in Proteopedia that contain a ConSurf scene include:
16: ...ish to display from a green link in an article in Proteopedia.
20: ...sult, here is how to attach it to a green link in Proteopedia.
24: ..._into_Proteopedia|Copying FirstGlance Scenes into Proteopedia]].</big>
31: ...isplaying your ConSurf result. (If not, see the [[Proteopedia:Video_Guide|Video Guides]] and [[Help:Editing]].) - Interactive 3D Complements in Proteopedia (7,603 bytes)
1: ...ith the [[Proteopedia:Team#Proteopedia_I3DC_Board|Proteopedia editor]] at any time. I3DC are [[#Protection From...
3: ...ividual publications in any journal. '''List of [[Proteopedia:I3DC|I3DC pages]]''' available for open access.
13: ...tive 3D complement in Proteopedia. Members of the Proteopedia team stand ready to assist: [[Special:Contact|Con...
38: Interactive 3D complements in Proteopedia have some functions in common with supplementary ...
40: ...butions to Proteopedia (for details, please see [[Proteopedia:Terms of Service]]). - Image:ANTIGEN IMAGE PROTEOPEDIA.JPEG (0 bytes)
- Image:Proteopedia rubrics.pdf (113 bytes)
- Image:Thiolase-table-for-proteopedia.pdf (0 bytes)
- Image:Table-2-for-proteopedia.PNG (0 bytes)
Page text matches
- Main Page 20190127 (6,331 bytes)
3: Proteopedia will be down for infrastructure maintenance from ...
7: ...der to move Proteopedia to a better server. While Proteopedia is in READ-ONLY, it will be possible to search an...
13: ... margin:0; padding:0.3em; color:#000;">Welcome to Proteopedia</span>
19: ... to Structure]] * [[Proteopedia:About|About]] * [[Proteopedia:Video_Guide|Video Guide]] * [[Help:Contents|Help]...
29: ...pedia:Featured article/{{#expr: {{#time:U}} mod {{Proteopedia:Number of featured articles}}}}}}</div> - Help:Editing (24,612 bytes)
2: ...rted|Help:Getting Started in Proteopedia]], the [[Proteopedia:Video Guide|Video Guides]], and the main [[Help]]...
6: ...omplete help reference dealing with wikitext, and Proteopedia uses the same wiki software.
13: For fuller coverage, see [[Proteopedia:How to Make a Page|How to Make a Page]]. <br>
23: ...o the list [[Proteopedia:What's New|What's New in Proteopedia?]].
25: ...age]] for guidance as to how to make an excellent Proteopedia page. - 3by5 (2,483 bytes)
5: ...tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BY5 FirstGlance]. <br>
8: ...ass="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3by5 FirstGlance], [http://oc...
15: <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> - User:Wayne Decatur/Sandboxsurffade (1,352 bytes)
3: ...uest of Jaime Prilusky, this has been copied to [[Proteopedia:DIY:Templates]] - User:Jessica Sheehe (324 bytes)
9: ...Field of Expertise or Study: I will be creating a proteopedia page for a class project under Dr. Stephen Everse... - 1zk8 (2,708 bytes)
5: ...tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZK8 FirstGlance]. <br>
8: ...ass="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zk8 FirstGlance], [http://oc...
17: <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> - 1zkd (2,724 bytes)
5: ...tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZKD FirstGlance]. <br>
8: ...ass="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zkd FirstGlance], [http://oc...
17: <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> - Help:Contents (6,518 bytes)
2: Proteopedia (see [[Proteopedia:Overview|Overview]]) is the 3D encyclopedia of pr...
8: ===<i class="fas fa-directions"></i> Navigating Proteopedia===
9: Proteopedia is organized like an encyclopedia, with entries (...
14: The special feature of Proteopedia entries are the interactive 3D representations of...
20: The section headed "Proteopedia Page Contributors and Editors" (on the bottom of ... - Proteopedia:About (7,060 bytes)
4: ==[[Proteopedia:Overview|Overview of Proteopedia]]==
5: The [[Proteopedia:Overview|Overview]] '''briefly''' introduces Purp...
7: ==Proteopedia Mission Statement==
10: ==Goals for Proteopedia==
16: * To develop new '''[[Teaching strategies using Proteopedia]]'''. - 117e (5,307 bytes)
5: ...tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=117E FirstGlance]. <br>
8: ...ass="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=117e FirstGlance], [http://oc...
17: <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> - 1dan (5,989 bytes)
5: ...tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DAN FirstGlance]. <br>
8: ...ass="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dan FirstGlance], [http://oc...
19: <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> - 8gpb (5,904 bytes)
5: ...tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8GPB FirstGlance]. <br>
8: ...ass="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8gpb FirstGlance], [http://oc...
17: <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> - 2src (9,009 bytes)
5: ...tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2SRC FirstGlance]. <br>
8: ...ass="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2src FirstGlance], [http://oc...
19: <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> - Scene authoring tools (23,035 bytes)
1: ...|Instructions for creating a molecular scene with Proteopedia's Scene Authoring Tools]], and watch the introduc...
12: ...an be viewed here: http://www.weizmann.ac.il/ISPC/Proteopedia.html.
16: ...|Instructions for creating a molecular scene with Proteopedia's Scene Authoring Tools]] for tutorial examples.
26: #Inserting the scene into the Proteopedia page.
35: [[Image:Load_molecule.png|thumb|The load molecule tab in action]] - 1m85 (2,936 bytes)
5: ...tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M85 FirstGlance]. <br>
8: ...ass="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m85 FirstGlance], [http://oc...
17: <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> - 101m (2,671 bytes)
5: ...tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=101M FirstGlance]. <br>
8: ...ass="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=101m FirstGlance], [http://oc...
17: <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> - 102l (2,926 bytes)
5: ...tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=102L FirstGlance]. <br>
8: ...ass="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=102l FirstGlance], [http://oc...
17: <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> - 102m (2,600 bytes)
5: ...tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=102M FirstGlance]. <br>
8: ...ass="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=102m FirstGlance], [http://oc...
17: <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> - 103l (2,925 bytes)
5: ...tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=103L FirstGlance]. <br>
8: ...ass="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=103l FirstGlance], [http://oc...
17: <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> - 104m (2,666 bytes)
5: ...tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=104M FirstGlance]. <br>
8: ...ass="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=104m FirstGlance], [http://oc...
17: <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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