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- Missing residues and incomplete sidechains (25,887 bytes)
4: ...s]] are missing standard amino acid or nucleotide residues that were present in the experimental material, a...
5: ==Missing Residues==
6: ... of the [[Empirical models]] in the [[PDB]], some residues (amino acids or nucleotides) that were present in...
7: ...83% of X-ray crystallography entries have missing residues.
8: * 14% of solution NMR entries have missing residues. - Image:Labeled Glutamate Aspartate Residues Interacting Ferritin 3KX9.pse (71 bytes)
- Image:Conserved residues.png (0 bytes)
- Category:Non-glycine residues at left-handed helical structure (84 bytes)
1: List of pages with the keyword Non-glycine residues at left-handed helical structure - Category:Seven amino acid residues mutant (63 bytes)
1: List of pages with the keyword Seven amino acid residues mutant - Category:Loose alpha turn among residues ser3-phe7 (72 bytes)
1: ... of pages with the keyword Loose alpha turn among residues ser3-phe7 - Category:Residues 1-75 (44 bytes)
1: List of pages with the keyword Residues 1-75 - Standard Residues (2,540 bytes)
1: ...M in PDB-format atomic coordinate files. Standard residues are:
15: *[[Non-Standard Residues]] - Flexibility of aromatic residues in acetylcholinesterase (7,343 bytes)
1: ...sidues_in_acetylcholinesterase/Ache_apo_14aromaticresidues/2' align='right' caption="3D structure of TcAChE ...
4: == Flexibility of aromatic residues in the active-gorge of AChE ==
5: ...scene>, viz. <scene name='Flexibility_of_aromatic_residues_in_acetylcholinesterase/Groupiii/6'>W84, Y130, Y4...
9: === Group I: residues with fixed side-chain conformation ===
11: ...F288, and F290 fall into group I, the category of residues with fixed side-chain conformations in both cryst... - Category:Amylase acarbose aromatic residues mutagenesis (77 bytes)
1: ... pages with the keyword Amylase acarbose aromatic residues mutagenesis - Image:Conserved residues.PNG (0 bytes)
- Category:Residues 1-90 (44 bytes)
1: List of pages with the keyword Residues 1-90 - Image:Expand residues.jvxl (70 bytes)
- Image:Key residues at site 2-Arg 278 and Lys 342.gif (0 bytes)
- Image:Alpha Helices Residues.jpg (0 bytes)
- Image:Hydrophobic residues in RTP.jpg (0 bytes)
- Unknown amino acids and nucleic residues (3,768 bytes)
1: ...at "HET records are used to describe non-standard residues ... that constitute part of a biological polymer
7: While one might expect unknown residues to be more common in entries released in the 20th...
144: ...Details'', alerts you to the presence of UNK or N residues, and reports the counts. Examples for UNK and N ... - Image:DHP active site residues 2.gif (0 bytes)
- Image:Stabilizing residues of PAL active site.png (62 bytes)
- Image:Beta lac Residues.jpg (262 bytes)
1: ...s residues. Two disulfide linkages are located at residues Cys-106 to Cys-119 and Cys-66 to Cys-160. One fre...
Page text matches
- Telomerase Reverse Transcriptase (5,665 bytes)
11: [[Image:TERT_diagram.jpg|600px]]
20: ...trahymena Thermophila TERT fragment consisting of residues 2-191 with an N-terminal His6 tag was cristallize...
22: ...nal <scene name='Sandbox/Methionine/1'>methionine residues</scene> were engineered into the protein sequence...
25: Therefore this region (residues 177-191) is flexible in solution and needs a macr...
37: ...ected with α4 (residues 77-87) and β4 with α5 (residues 122-127) through loops. The methionine can be fo... - Sandbox Dav 14 (1,103 bytes)
8: ... a new bond between the threonine and the glycine residues. - Sandbox dav 4 (1,378 bytes)
8: ... a new bond between the threonine and the glycine residues'' - Help:Editing (24,612 bytes)
74: ... parameter like so: <nowiki>[[Image:someImageName.jpg|frame|someCaption]]</nowiki>. If frame is set to...
151: ...d Residue]] was created, and later [[Non-Standard Residues]] (plural) was created and redirected to the form... - Acetylcholinesterase (8,905 bytes)
8: ...ve with the enzyme, see [[Flexibility of aromatic residues in acetylcholinesterase]]. Solution of the 3D str...
11: [[Image:Synapse_Schematic.jpg|thumb|Cholinergic Synapse|300px|left]]
13: ...</scene> (ACh/''Tc''AChE structure [[2ace]]). The residues <scene name='2ace/Cv/6'>Trp84 and Phe330</scene> ...
26: ...s a salt bridge with His440 Nε2. The active site residues of the aged soman/TcAChE are colored <span style... - Hemoglobin (19,366 bytes)
16: ...globin''' found in neural tissue and contains 109 residues<ref>PMID:9642264</ref> .
18: ...''' found in bacteria and plants. They are 20-40 residues shorter than other Hb and have 2-on-2 alpha helic...
26: ...ramer of two α and two β chains, of 141 and 146 residues in human. They are different but homologous, wit...
47: ...ame='32/32/Heme_binding_pocket_apo/1'>hydrophobic residues</scene>, shown in grey. They actually surround th...
64: ...cal to making Hb allostery work, and mutations of residues in this interface have been found to be especiall... - Ann Taylor/Hemoglobin (7,712 bytes)
17: ...ty of the T state due to protonation of histidine residues, especially <scene name='57/576710/Bohr_effect/2'...
19: ...576710/Bpg_binding_residues/2'>positively charged residues</scene>. In the oxy form, this cavity is much na... - CHEM2052 Tutorial (6,397 bytes)
13: ...ses perform their catalytic roles using three key residues, which are commonly referred to as the '''catalyt...
14: ...o determine the residue numbers for the catalytic residues. (The residue code will appear near the mouse poi...
18: Now compare the active site residues of chymotrypsin to the <scene name='59/596400/Mor...
21: ...ave been color coded according to hydrophobicity (residues are indicated as: {{Template:ColorKey_Hydrophobic...
32: ...ndbox_5/New_chymotrypsin-triad/11'>binding pocket residues</scene> that were highlighted above. (Or you can ... - Acetylcholine (3,078 bytes)
14: ...cene> of (ACh/''Tc''AChE structure [[2ace]]). The residues <scene name='2ace/Cv/6'>Trp84 and Phe330</scene> ... - NADH quinone oxidoreductase (NQO1) with inhibitor dicoumarol (8,927 bytes)
3: [[Image:NQO_Dic copy.jpg|border|left|300px]]
7: ...ene-bis (4-hydroxycoumarin)),[[Image:Figure3 copy.jpg|border|center|300px]] is the most potent competit...
10: ...color='lime'><b>chain C in lime</b></font>. NQO1 residues, participating in ligand interactions, are shown ...
14: ...ame='2f1o/Align/9'>distance</scene> between these residues increases from ~5 Å in the <font color='blue'><b...
15: ...o that of apo hNQO1, involve the distance between residues <scene name='2f1o/Align1/5'>Tyr 128 and Phe 232</... - 8gpb (5,904 bytes)
24: ...ctural change so that the overall shifts in these residues after the combined tertiary and quaternary change... - 2src (9,009 bytes)
13: ...lation. Phosphorylates RUNX3 and COX2 on tyrosine residues, TNK2 on 'Tyr-284' and CBL on 'Tyr-731'. Enhances...
26: ...res of inactive Src kinases, Tyr-416 and flanking residues are disordered. We report here four additional c-... - Scene authoring tools (23,035 bytes)
4: [[Image:SAT show.JPG|350px]]
6: ... Jmol window (using the [[Image:Structure buttons.JPG|50px]] buttons above the text-editing area), save...
28: [[Image:SAT_tabs.JPG|600px]]
56: [[Image:SAT controls outside of tabs.JPG|600px]]
65: ...l (e.g. the command "show sequence" shows all the residues/groups that contain selected atoms). For one-line... - 103d (2,347 bytes)
2: ...HUMAN CENTROMERE (GGA)2 MOTIF: UNPAIRED GUANOSINE RESIDUES STACKED BETWEEN SHEARED G(DOT)A PAIRS==
11: ... The duplex contains unpaired staggered guanosine residues, which co-stack by intercalation between sheared ...
13: ...human centromere (GGA)2 motif. Unpaired guanosine residues stacked between sheared G.A pairs.,Chou SH, Zhu L... - 104d (3,095 bytes)
11: ...d (d) although the sugar conformations of the DNA residues A6-G12 are closer to B-form, the basic helical pr... - 10gs (5,017 bytes)
24: ...itor and making interactions with the active-site residues Phe8 and Trp38. The structure provides an explana... - 1mty (5,005 bytes)
24: ...ly coordinated by 2 histidine and 4 glutamic acid residues as well as by a bridging hydroxide ion, a termina... - 1e43 (5,591 bytes)
24: ... where it bridges the two beta-sheets. Three acid residues (Glu261, Asp328, and Asp231) form an active site ... - 1e40 (5,811 bytes)
24: ... where it bridges the two beta-sheets. Three acid residues (Glu261, Asp328, and Asp231) form an active site ... - 2lxy (3,569 bytes)
12: ... a biomimetic model for enzymes that use tyrosine residues in redox catalysis and multistep electron transfe...
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