File list
From Proteopedia
 Date |
Name | User | Size | Description |
|---|---|---|---|---|
| 23:45, 27 April 2025 | Chimera_Image.png (file) | Ryan Smith | 528 KB | |
| 23:40, 27 April 2025 | Dielsalderasesubstrates.jpeg (file) | Katherine Thuma | 54 KB | |
| 23:39, 27 April 2025 | InterPro_Image.png (file) | Ryan Smith | 38 KB | |
| 23:39, 27 April 2025 | SampleDAmech.jpeg (file) | Katherine Thuma | 54 KB | |
| 23:35, 27 April 2025 | 2o14-assembly1.cif.gz (file) | Andrew Hoch | 77 KB | (Biological #D strucuture of Protein 2o14) |
| 23:23, 27 April 2025 | Frame_apngframe1.png (file) | Matthew Chien | 164 KB | (Structure of C1) |
| 23:19, 27 April 2025 | 2o14-sf.cif.gz (file) | Andrew Hoch | 608 KB | (Structure of protein 2O14 from X-Ray Crystal Structure of Protein YXIM_BACsu from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR595, made by: Kuzin, A.P., Chen, Y., Seetharaman, J., Chen, C.X., Fang, Y., Cunningham, K., Ma, L.-C., X) |
| 20:45, 27 April 2025 | 7rdsAlphaFold.pse (file) | Marcos Ngo | 667 KB | |
| 19:25, 27 April 2025 | Conserved_amino_acids.jpg (file) | Simone McCowan | 101 KB | |
| 19:09, 27 April 2025 | Glycerol_Ligand_in_Ferritin_3KX9.png (file) | Alexander Grayzel | 25 KB | (Gycerol in ferritin.) |
| 17:12, 27 April 2025 | Minibinders_RBD.jpg (file) | Lilly Hiester | 58 KB | |
| 15:41, 27 April 2025 | 3HO4_overlap_with_1n8o.png (file) | Cameron Snelbaker | 40 KB | (3H04 overlap with 1n8o) |
| 15:40, 27 April 2025 | 3H04_overlap_with_1pfp.png (file) | Cameron Snelbaker | 43 KB | (SPRITE overlap of 3H04 with 1pfp) |
| 15:27, 27 April 2025 | 3H04_overlap_with_1zoi.png (file) | Cameron Snelbaker | 45 KB | |
| 14:27, 27 April 2025 | BRD_Mechanism.jpg (file) | James Lignos | 111 KB | (Bromodomains are epigenetic "readers" that bind to acetylated lysines on N-terminal histone tails. Histone acetylation is a post translational modification that is associated with regions of chromatin that are primed for transcription. Bromodomains bind t) |
| 01:17, 27 April 2025 | TableDali.jpg (file) | Emma Caszatt | 64 KB | |
| 01:15, 27 April 2025 | FinalConc.jpg (file) | Emma Caszatt | 25 KB | |
| 01:15, 27 April 2025 | FinalConc.jpeg (file) | Emma Caszatt | 25 KB | |
| 01:12, 27 April 2025 | TableDali.jpeg (file) | Emma Caszatt | 64 KB | |
| 01:10, 27 April 2025 | SwissDock1.jpg (file) | Emma Caszatt | 35 KB | |
| 00:45, 27 April 2025 | Screen_Shot_2025-04-26_at_8.44.28_PM.png (file) | Maria. Brzezinski | 58 KB | (Chimera image of 3B7F and 1XNY_C00) |
| 00:43, 27 April 2025 | Assay2.jpg (file) | Emma Caszatt | 40 KB | |
| 00:42, 27 April 2025 | Assay.jpg (file) | Emma Caszatt | 39 KB | |
| 00:41, 27 April 2025 | FinalConc.png (file) | Emma Caszatt | 8 KB | |
| 00:40, 27 April 2025 | StandardCurve.jpg (file) | Emma Caszatt | 40 KB | |
| 00:36, 27 April 2025 | SwissDock1.png (file) | Emma Caszatt | 116 KB | |
| 00:32, 27 April 2025 | BLAST.jpg (file) | Emma Caszatt | 29 KB | |
| 00:31, 27 April 2025 | TableDali.png (file) | Emma Caszatt | 32 KB | |
| 00:26, 27 April 2025 | Chimera.jpg (file) | Emma Caszatt | 45 KB | |
| 00:24, 27 April 2025 | SPRITE.jpg (file) | Emma Caszatt | 6 KB | |
| 23:02, 26 April 2025 | ComplexLabeled.pse (file) | Peyton Jenkins | 9.96 MB | |
| 18:44, 26 April 2025 | AF-W8VY28-F1-model_v4.pdb (file) | Anders Lewisesquerre | 106 KB | |
| 16:02, 26 April 2025 | PfBDP1_inhibition.png (file) | James Lignos | 212 KB | (Cartoon depiction of drug based rationale for targeting the bromodomain of PfBDP1 to block its interaction with chromatin ligands at the promoters of genes implicated in host cell invasion as a strategy to combat malaria.) |
| 15:59, 26 April 2025 | PfBDP1_inhibition.pdf (file) | James Lignos | 186 KB | (Cartoon depiction of drug based rationale for targeting the bromodomain of PfBDP1 to block its interaction with chromatin ligands at the promoters of genes implicated in host cell invasion as a strategy to combat malaria.) |
| 15:54, 26 April 2025 | PfBDP1_Inhibition_Schematic.png (file) | James Lignos | 212 KB | (Cartoon depiction of drug based rationale for targeting the bromodomain of PfBDP1 to block its interaction with acetylated chromatin ligands at the promoters of genes implicated in host cell invasion as a strategy to combat malaria.) |
| 15:54, 26 April 2025 | PfBDP1_Inhibition_schematic.png (file) | James Lignos | 212 KB | (Cartoon depiction of drug based rationale for targeting the bromodomain of PfBDP1 to block its interaction with acetylated chromatin ligands at the promoters of genes implicated in host cell invasion as a strategy to combat malaria.) |
| 15:53, 26 April 2025 | Screenshot_2025-04-26_at_11.44.58 AM.png (file) | James Lignos | 212 KB | (Cartoon depiction of drug based rationale for targeting the bromodomain of PfBDP1 to block its interaction with acetylated chromatin ligands at the promoters of genes implicated in host cell invasion as a strategy to combat malaria.) |
| 15:50, 26 April 2025 | Screenshot_2025-04-26_at_11.44.58 AM.pdf (file) | James Lignos | 186 KB | (Cartoon depiction of drug based rationale for targeting the PfBDP1 bromdodomain to block the interaction between chromatin ligands and PfBDP1 at the promoters of genes implicated in host cell invasion as a strategy to combat malaria.) |
| 14:45, 26 April 2025 | Kd_table.png (file) | Carson Powers | 40 KB | (Table 1. Dissociation constants (Kd) for SARS-CoV-2 spike RBD binding to ACE2 and engineered minibinders, measured by biolayer interferometry to compare affinities for the spike protein. ) |
| 14:03, 26 April 2025 | Spike_infection_cycle.png (file) | Carson Powers | 356 KB | (SARS-CoV-2 infection cycle: the viral spike protein (cyan) binds to the ACE2 receptor (magenta) on the cell surface, triggering endocytosis and ACE2 down-regulation, release of viral RNA into the cytosol, translation of the viral polymerase and genome rep) |
| 18:26, 25 April 2025 | 4Q7QpfamLipases.png (file) | Neil Singer Divins | 107 KB | (Pfam stack similarities between 4q7q and various enzymes) |
| 18:25, 25 April 2025 | 4Q7QOrigin.png (file) | Neil Singer Divins | 364 KB | (a) |
| 18:24, 25 April 2025 | 4Q7QABSequence.png (file) | Neil Singer Divins | 189 KB | (Primary Sequence of both 4Q7Q chains) |
| 18:23, 25 April 2025 | 4Q7QLipasesConserv.png (file) | Neil Singer Divins | 112 KB | (Conserved Sequences between 4Q7Q and Lipases) |
| 18:22, 25 April 2025 | 4Q7QLipasesSecondary.png (file) | Neil Singer Divins | 94 KB | (Secondary Structure Overlap between 4Q7Q and Lipases) |
| 18:21, 25 April 2025 | DecanoateDocking.png (file) | Neil Singer Divins | 336 KB | (SwissDock Results 4Q7Q + Decanoate) |
| 18:20, 25 April 2025 | ThioesteraseIStructure.png (file) | Neil Singer Divins | 93 KB | (a) |
| 18:16, 25 April 2025 | 4Q7QSecondaryEsterases.png (file) | Neil Singer Divins | 59 KB | (Secondary Structure Alignments between 4Q7Q and Esterases) |
| 18:16, 25 April 2025 | 4Q7QDockingEnergies.png (file) | Neil Singer Divins | 14 KB | (SwissDock Results from 4Q7Q analysis) |
| 18:15, 25 April 2025 | 4Q7QEsteraseConserv.png (file) | Neil Singer Divins | 59 KB | (Conserved Sequences between 4Q7Q and various esterases.) |
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