User:Helen Ginn

(Difference between revisions)

Current revision

Undergraduate Student in Biochemistry at Oxford University.
Website: [www.cmol.org.uk]

/Workbench I am a link to my workbench

Ligands:

Structural annotation:
Resources:	CATH : 1H6Fa00, 1H6Fb00 InterPro : Ipr001699, Ipr008967 Pfam : PF00907 SCOP : d1h6fa_, d1h6fb_ UniProt : O15119

Functional annotation:
Cellular component:	nucleus
Biological process:	positive regulation of cell proliferation embryonic digit morphogenesis regulation of transcription from RNA polymerase II promoter cell aging negative regulation of myoblast differentiation multicellular organismal development anti-apoptosis follicle-stimulating hormone secretion luteinizing hormone secretion male genitalia development transcription negative regulation of transcription, DNA-dependent regulation of transcription, DNA-dependent skeletal development positive regulation of cell cycle determination of anterior/posterior axis, embryo forelimb morphogenesis female genitalia development embryonic arm morphogenesis organ morphogenesis mammary gland development mesoderm morphogenesis
Molecular function:	transcription repressor activity DNA binding general transcriptional repressor activity transcription factor activity sequence-specific DNA binding RNA polymerase II transcription factor activity

Evolutionary conservation:

Toggle Conservation Colors:

Rows = identical sequences:

Further Information:

Caveats,

Resources:

FirstGlance, OCA, RCSB, PDBsum

Coordinates:

save as pdb, mmCIF, xml

3₁₀ helix interacting with DNA with

Now try .

TBX3 3_10 helix interacting with DNA.

Helen Ginn, Eran Hodis

@@ Line 1: / Line 1: @@
 Undergraduate Student in Biochemistry at Oxford University.
-Website: www.ribosome.co.uk
+<br>Website: [[http://www.cmol.org.uk/index.php?proteopedia www.cmol.org.uk]]
+=A link=
+[[/Workbench]] I am a link to my workbench
 =Pages to which I contribute=
@@ Line 8: / Line 12: @@
 {{STRUCTURE_1h6f|  PDB=1h6f |  SCENE=  }}
+<sub>10</sub> helix interacting with DNA with <scene name='User:Helen_Ginn/310c_277-279-281-283/1'>residues N277, F279, K281 and F283.</scene>
+<scene name='User:Helen_Ginn/310c_277/3'>N277 only</scene>
+<scene name='User:Helen_Ginn/310c_279/1'>F279 only</scene>
+<scene name='User:Helen_Ginn/310c_281/1'>F281 only</scene>
+<scene name='User:Helen_Ginn/310c_283/1'>F283 only</scene>
+Now try <scene name='User:Helen_Ginn/310c_chaina/1'>zooming in to Chain A</scene>.
+[[Image:TBX3_3_labels.png|thumb|left|alt=TBX3 3_10 helix interacting with DNA|TBX3 3_10 helix interacting with DNA.]]