Neuroligin-Neurexin Interaction
From Proteopedia
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There are two types of NRXNS, alpha and beta. While alpha NRXNs are much larger than beta-NRXNs, both contain a single LNS (Laminin,NRXN,sex-hormone-binding globulin domains) domain. Extensive alternative spilicing at five unique positions generates thousands of NRXN isoforms which likely specify a “code” of interactions at synapses that varies by location and activity of the neuron. (sudhof) All NRXN isoforms have the same “jelly roll fold” comprised of **14 beta sheets**. The alternative splicing only **impacts one end of the jelly roll**, including sheets 1, 2, 13 & 14 and the lone alpha helix in the LNS domain. (Rudenko) | There are two types of NRXNS, alpha and beta. While alpha NRXNs are much larger than beta-NRXNs, both contain a single LNS (Laminin,NRXN,sex-hormone-binding globulin domains) domain. Extensive alternative spilicing at five unique positions generates thousands of NRXN isoforms which likely specify a “code” of interactions at synapses that varies by location and activity of the neuron. (sudhof) All NRXN isoforms have the same “jelly roll fold” comprised of **14 beta sheets**. The alternative splicing only **impacts one end of the jelly roll**, including sheets 1, 2, 13 & 14 and the lone alpha helix in the LNS domain. (Rudenko) | ||
- | The extracellular residues of NLGNs, which bind to the LNS domains of both alpha and beta NRXNs with nanomolar affinity, are composed of a single domain that is homologous with [[acetylcholinesterase]] (sudhof). Neuroligin-4 consists of a twisted **12 stranded beta sheet surrounded by 14 alpha helices**. Three intramolecular **disulfide bridges** between residues Cys110-Cys146, Cys306-Cys317, and Cys476-Cys510, stabilize the structure. Neuroligins readily form a dimmer consisting of two neuroligin subunits. 100% of the dimer **interactions are hydrophobic** with the most unique feature being a **prominent four-helix bundle**. (Fabrichny) The **central pocket within Neuroligin**, which in Acetylcholinesterase contains the active center and oxyanion hole, is catalytically inactive due to a substitution of Gly for Ser **at position 254**, which is typically part of AChE’s hydrolytic catalytic triad. Within the central pocket however **lies a phosphate** bound by residues Gly254, Glu375, and His489, which provides the NLGN4 molecule with additional flexibility. The **so-called Cys-Loop** (Residues Cys110-Cys146) forms one side of the rim of the central pocket and is a homolog of the lid found in lipases of the alpha/beta-hydrolase fold family. This Cys-Loop blocks the entry of substate to the central pocket and provides stability to the NLGN structure. (Fabrichny) | + | The extracellular residues of NLGNs, which bind to the LNS domains of both alpha and beta NRXNs with nanomolar affinity, are composed of a single domain that is homologous with [[acetylcholinesterase]] (AChE) (sudhof). Neuroligin-4 consists of a twisted **12 stranded beta sheet surrounded by 14 alpha helices**. Three intramolecular **disulfide bridges** between residues Cys110-Cys146, Cys306-Cys317, and Cys476-Cys510, stabilize the structure. Neuroligins readily form a dimmer consisting of two neuroligin subunits. 100% of the dimer **interactions are hydrophobic** with the most unique feature being a **prominent four-helix bundle**. (Fabrichny) The **central pocket within Neuroligin**, which in Acetylcholinesterase contains the active center and oxyanion hole, is catalytically inactive due to a substitution of Gly for Ser **at position 254**, which is typically part of AChE’s hydrolytic catalytic triad. Within the central pocket however **lies a phosphate** bound by residues Gly254, Glu375, and His489, which provides the NLGN4 molecule with additional flexibility. The **so-called Cys-Loop** (Residues Cys110-Cys146) forms one side of the rim of the central pocket and is a homolog of the lid found in lipases of the alpha/beta-hydrolase fold family. This Cys-Loop blocks the entry of substate to the central pocket and provides stability to the NLGN structure. (Fabrichny) |
NRXN**-Beta1 is bound** through its hypervariable loop edge to the electronegative surface of the NLGN-4 molecule, opposite the Cys-loop. The NRXN-NLGN interface is established by both indirect and direct interactions. Indirect interactions include **coordination of a divalent calcium cation** by residues Asp 137, Asn 238, Val 154 and Ile 236 of NRXN-Beta1 and residues Gln 359 and Gly 360 of NLGN-4. Direct interactions between NRXN and NLGN include extensive hydrogen bonding and Van der Waals contacts as well as salt bridges between residues NRXN-Arg 109 & NLGN-Glu 270 and NRXN-Arg232 & NLGN Asp 351. The vast majority of these interactions are conserved among all neuroligin types. (Fabrichny) | NRXN**-Beta1 is bound** through its hypervariable loop edge to the electronegative surface of the NLGN-4 molecule, opposite the Cys-loop. The NRXN-NLGN interface is established by both indirect and direct interactions. Indirect interactions include **coordination of a divalent calcium cation** by residues Asp 137, Asn 238, Val 154 and Ile 236 of NRXN-Beta1 and residues Gln 359 and Gly 360 of NLGN-4. Direct interactions between NRXN and NLGN include extensive hydrogen bonding and Van der Waals contacts as well as salt bridges between residues NRXN-Arg 109 & NLGN-Glu 270 and NRXN-Arg232 & NLGN Asp 351. The vast majority of these interactions are conserved among all neuroligin types. (Fabrichny) |
Revision as of 03:26, 21 February 2011
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Additional Structures of Neuroligin and Neurexin
For additional Structures of Neuroligin, See: Neuroligin
For additional Structures of Neurexin, See: Neurexin