2bdh
From Proteopedia
(New page: 200px<br /> <applet load="2bdh" size="450" color="white" frame="true" align="right" spinBox="true" caption="2bdh, resolution 3.00Å" /> '''Human Kallikrein 4 ...) |
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caption="2bdh, resolution 3.00Å" /> | caption="2bdh, resolution 3.00Å" /> | ||
'''Human Kallikrein 4 complex with zinc and p-aminobenzamidine'''<br /> | '''Human Kallikrein 4 complex with zinc and p-aminobenzamidine'''<br /> | ||
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==About this Structure== | ==About this Structure== | ||
| - | 2BDH is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with ZN and PBZ as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http:// | + | 2BDH is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with <scene name='pdbligand=ZN:'>ZN</scene> and <scene name='pdbligand=PBZ:'>PBZ</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BDH OCA]. |
==Reference== | ==Reference== | ||
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[[Category: structural proteomics in europe]] | [[Category: structural proteomics in europe]] | ||
| - | ''Page seeded by [http:// | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Feb 15 17:15:55 2008'' |
Revision as of 15:15, 15 February 2008
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Human Kallikrein 4 complex with zinc and p-aminobenzamidine
Contents |
Overview
Human tissue kallikrein 4 (hK4) belongs to a 15-member family of closely, related serine proteinases. hK4 is predominantly expressed in prostate, activates hK3/PSA, and is up-regulated in prostate and ovarian cancer. We, have identified active monomers of recombinant hK4 besides inactive, oligomers in solution. hK4 crystallised in the presence of zinc, nickel, and cobalt ions in three crystal forms containing cyclic tetramers and, octamers. These structures display a novel metal site between His25 and, Glu77 that links the 70-80 loop with the N-terminal segment. Micromolar, zinc as present in prostatic fluid inhibits the enzymatic activity of hK4, against fluorogenic substrates. In our measurements, wild-type hK4, exhibited a zinc inhibition constant (IC50) of 16 microM including a, permanent residual activity, in contrast to the zinc-independent mutants, H25A and E77A. Since the Ile16 N terminus of wild-type hK4 becomes more, accessible for acetylating agents in the presence of zinc, we propose that, zinc affects the hK4 active site via the salt-bridge formed between the N, terminus and Asp194 required for a functional active site. hK4 possesses, an unusual 99-loop that creates a groove-like acidic S2 subsite. These, findings explain the observed specificity of hK4 for the P1 to P4, substrate residues. Moreover, hK4 shows a negatively charged surface, patch, which may represent an exosite for prime-side substrate, recognition.
Disease
Known diseases associated with this structure: Amelogenesis imperfecta, pigmented hypomaturation type OMIM:[603767]
About this Structure
2BDH is a Single protein structure of sequence from Homo sapiens with and as ligands. Full crystallographic information is available from OCA.
Reference
Crystal structures of human tissue kallikrein 4: activity modulation by a specific zinc binding site., Debela M, Magdolen V, Grimminger V, Sommerhoff C, Messerschmidt A, Huber R, Friedrich R, Bode W, Goettig P, J Mol Biol. 2006 Oct 6;362(5):1094-107. Epub 2006 Aug 3. PMID:16950394
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