Pre-mRNA-splicing factor
From Proteopedia
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== 3D Structures of pre-mRNA splicing factors == | == 3D Structures of pre-mRNA splicing factors == | ||
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===Pre-mRNA-splicing factor 2=== | ===Pre-mRNA-splicing factor 2=== | ||
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[[3e66]] – yPrp β-finger domain<BR /> | [[3e66]] – yPrp β-finger domain<BR /> | ||
[[3e9o]], [[3e9p]] - yPrp RNA-binding domain<BR /> | [[3e9o]], [[3e9p]] - yPrp RNA-binding domain<BR /> | ||
| - | [[2p87]], [[2og4]] - yPrp C terminal<BR /> | + | [[2p87]], [[2og4]], [[3sbg]] - yPrp C terminal<BR /> |
[[3lru]] – hPrp residues 1831-1990<BR /> | [[3lru]] – hPrp residues 1831-1990<BR /> | ||
[[3e9l]] – hPrp endonuclease domain<BR /> | [[3e9l]] – hPrp endonuclease domain<BR /> | ||
[[3enb]] - hPrp core domain IV<BR /> | [[3enb]] - hPrp core domain IV<BR /> | ||
[[2p8r]] – Prp C terminal (mutant) – ''Caenorhabditis elegans'' | [[2p8r]] – Prp C terminal (mutant) – ''Caenorhabditis elegans'' | ||
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| + | ===Pre-mRNA-splicing factor 9=== | ||
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| + | [[4dgw]] – yPrp + Prp 21 + Prp 11 | ||
===Pre-mRNA-splicing factor 18=== | ===Pre-mRNA-splicing factor 18=== | ||
Revision as of 10:45, 21 June 2012
Pre-mRNA-splicing factors (Prp) are the proteins which associate with mRNA at its various splicing sites to produce alternative splicing. For details on pre-mRNA-splicing factors and Prp24 see Prp24; see detailed Prp19.
3D Structures of pre-mRNA splicing factors
Update June 2012
Pre-mRNA-splicing factor 2
3beg – hPrp residues 105-219 + Ser/Thr-protein kinase – human
2o3d – hPrp P33 subunit
Pre-mRNA-splicing factor 3
1x4q – hPrp PWI domain - NMR
Pre-mRNA-splicing factor 3B
3lqv, 2f9d, 2f9j – hPrp residues 377-415 + pre-mRNA branch site protein 14
2fho - hPrp residues 379-424 + spliceosomal protein P14 - NMR
2do5 – hPrp subunit 2 – NMR
1x5t - hPrp subunit 4 – NMR
1x5u - hPrp subunit 4 RNA-binding domain – NMR
Pre-mRNA-splicing factor 8
3sbt – yPrp RNAseH like domain + A1 cistron-splicing factor AAR2 – yeast
3e66 – yPrp β-finger domain
3e9o, 3e9p - yPrp RNA-binding domain
2p87, 2og4, 3sbg - yPrp C terminal
3lru – hPrp residues 1831-1990
3e9l – hPrp endonuclease domain
3enb - hPrp core domain IV
2p8r – Prp C terminal (mutant) – Caenorhabditis elegans
Pre-mRNA-splicing factor 9
4dgw – yPrp + Prp 21 + Prp 11
Pre-mRNA-splicing factor 18
2dk4 – hPrp splicing factor motif domain - NMR
Pre-mRNA-splicing factor 19
3lrv – yPrp WD40 domain
2bay – yPrp U-box
1n87 - yPrp U-box - NMR
Pre-mRNA-splicing factor 20
2i2y – Prp RNA-binding domain + RNA – Streptococcus – NMR
2i38 - hPrp RNA-binding domain (mutant) – NMR
snRNA-associated-splicing factor 24
2l9w – yPrp C terminal – NMR
2kh9 – yPrp residues 115-197 + RNA – NMR
2go9 – yPrp RNA-binding domains – NMR
2ghp - yPrp RNA-binding domains
Pre-mRNA-splicing factor 43P
2xau, [[3kx2 – yPrp + ADP
Pre-mRNA-splicing factor RBM22
2ytc – yPrp RNA-binding domain - NMR
Pre-mRNA-splicing factor RDS3
2k0a – yPrp - NMR
Pre-mRNA-splicing factor URN1
2juc – yPrp FF domain - NMR
