Template:STRUCTURE 1i4k

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(New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1i4k, resolution 2.5&Aring; (<scene name='initialview01'>initial scene</scene>) |SITE= |LIGAND= <scene name='pdbligand=CIT:...)
Current revision (05:57, 26 July 2012) (edit) (undo)
 
(3 intermediate revisions not shown.)
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{{Structure
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1i4k, resolution 2.5&Aring; (<scene name='initialview01'>initial scene</scene>)
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1i4k]], [[Resolution|resolution]] 2.50&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-
|SITE=
+
|LIGAND= <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>
|LIGAND= <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>
-
|ACTIVITY=
 
|GENE= AF0875 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2234 Archaeoglobus fulgidus])
|GENE= AF0875 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2234 Archaeoglobus fulgidus])
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01731 archeal_Sm1]</span>
 
|RELATEDENTRY=[[1d3b|1d3b]], [[1b34|1b34]]
|RELATEDENTRY=[[1d3b|1d3b]], [[1b34|1b34]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1i4k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1i4k OCA], [http://www.ebi.ac.uk/pdbsum/1i4k PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1i4k RCSB]</span>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1i4k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1i4k OCA], [http://www.ebi.ac.uk/pdbsum/1i4k PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1i4k RCSB]</span>
 +
|PROCESS={{GO|id=GO:0016071 | text = mRNA metabolic process}}
 +
|COMPONENT={{GO|id=GO:0030529 | text = ribonucleoprotein complex}}
 +
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4k100 1I4K100], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4k200 1I4K200], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kA00 1I4Ka00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kB00 1I4Kb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kC00 1I4Kc00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kD00 1I4Kd00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kE00 1I4Ke00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kF00 1I4Kf00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kG00 1I4Kg00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kH00 1I4Kh00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kI00 1I4Ki00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kJ00 1I4Kj00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kK00 1I4Kk00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kL00 1I4Kl00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kM00 1I4Km00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kN00 1I4Kn00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kO00 1I4Ko00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kP00 1I4Kp00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kQ00 1I4Kq00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kR00 1I4Kr00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kS00 1I4Ks00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kT00 1I4Kt00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kU00 1I4Ku00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kV00 1I4Kv00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kW00 1I4Kw00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kX00 1I4Kx00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kY00 1I4Ky00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1i4kZ00 1I4Kz00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001163 Ipr001163], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006649 Ipr006649], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010920 Ipr010920]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF01423 PF01423]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61690 d1i4k1_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61691 d1i4k2_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61692 d1i4ka_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61693 d1i4kb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61694 d1i4kc_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61695 d1i4kd_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61696 d1i4ke_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61697 d1i4kf_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61698 d1i4kg_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61699 d1i4kh_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61700 d1i4ki_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61701 d1i4kj_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61702 d1i4kk_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61703 d1i4kl_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61704 d1i4km_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61705 d1i4kn_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61706 d1i4ko_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61707 d1i4kp_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61708 d1i4kq_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61709 d1i4kr_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61710 d1i4ks_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61711 d1i4kt_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61712 d1i4ku_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61713 d1i4kv_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61714 d1i4kw_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61715 d1i4kx_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61716 d1i4ky_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=61717 d1i4kz_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?O29386 O29386]</span>
 +
|uPDB=1I4K|CONSURF={{!}}-
 +
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 +
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
 +
{{!}} '''Toggle Conservation Colors:'''
 +
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
 +
Rows = identical sequences:
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>A [x]</text>
 +
<name>jmb_1i4k_A</name>
 +
<title>toggle chain A</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>B [x]</text>
 +
<name>jmb_1i4k_B</name>
 +
<title>toggle chain B</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>C [x]</text>
 +
<name>jmb_1i4k_C</name>
 +
<title>toggle chain C</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>D [x]</text>
 +
<name>jmb_1i4k_D</name>
 +
<title>toggle chain D</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>E [x]</text>
 +
<name>jmb_1i4k_E</name>
 +
<title>toggle chain E</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>F [x]</text>
 +
<name>jmb_1i4k_F</name>
 +
<title>toggle chain F</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>G [x]</text>
 +
<name>jmb_1i4k_G</name>
 +
<title>toggle chain G</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>H [x]</text>
 +
<name>jmb_1i4k_H</name>
 +
<title>toggle chain H</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>I [x]</text>
 +
<name>jmb_1i4k_I</name>
 +
<title>toggle chain I</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>J [x]</text>
 +
<name>jmb_1i4k_J</name>
 +
<title>toggle chain J</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>K [x]</text>
 +
<name>jmb_1i4k_K</name>
 +
<title>toggle chain K</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>L [x]</text>
 +
<name>jmb_1i4k_L</name>
 +
<title>toggle chain L</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>M [x]</text>
 +
<name>jmb_1i4k_M</name>
 +
<title>toggle chain M</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>N [x]</text>
 +
<name>jmb_1i4k_N</name>
 +
<title>toggle chain N</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>O [x]</text>
 +
<name>jmb_1i4k_O</name>
 +
<title>toggle chain O</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>P [x]</text>
 +
<name>jmb_1i4k_P</name>
 +
<title>toggle chain P</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>Q [x]</text>
 +
<name>jmb_1i4k_Q</name>
 +
<title>toggle chain Q</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>R [x]</text>
 +
<name>jmb_1i4k_R</name>
 +
<title>toggle chain R</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>S [x]</text>
 +
<name>jmb_1i4k_S</name>
 +
<title>toggle chain S</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>T [x]</text>
 +
<name>jmb_1i4k_T</name>
 +
<title>toggle chain T</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>U [x]</text>
 +
<name>jmb_1i4k_U</name>
 +
<title>toggle chain U</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>V [x]</text>
 +
<name>jmb_1i4k_V</name>
 +
<title>toggle chain V</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>W [x]</text>
 +
<name>jmb_1i4k_W</name>
 +
<title>toggle chain W</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>X [x]</text>
 +
<name>jmb_1i4k_X</name>
 +
<title>toggle chain X</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>Y [x]</text>
 +
<name>jmb_1i4k_Y</name>
 +
<title>toggle chain Y</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>Z [x]</text>
 +
<name>jmb_1i4k_Z</name>
 +
<title>toggle chain Z</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>A [x]</text>
 +
<name>jmb_1i4k_A</name>
 +
<title>toggle chain A</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>A [x]</text>
 +
<name>jmb_1i4k_A</name>
 +
<title>toggle chain A</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>B [x]</text>
 +
<name>jmb_1i4k_B</name>
 +
<title>toggle chain B</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>A [x]</text>
 +
<name>jmb_1i4k_A</name>
 +
<title>toggle chain A</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
}}
}}

Current revision

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1i4k, resolution 2.50Å ()
Ligands:
Gene: AF0875 (Archaeoglobus fulgidus)
Related: 1d3b, 1b34
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml


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OCA

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