This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2dpi
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | {{Seed}} | ||
[[Image:2dpi.png|left|200px]] | [[Image:2dpi.png|left|200px]] | ||
| - | <!-- | ||
| - | The line below this paragraph, containing "STRUCTURE_2dpi", creates the "Structure Box" on the page. | ||
| - | You may change the PDB parameter (which sets the PDB file loaded into the applet) | ||
| - | or the SCENE parameter (which sets the initial scene displayed when the page is loaded), | ||
| - | or leave the SCENE parameter empty for the default display. | ||
| - | --> | ||
{{STRUCTURE_2dpi| PDB=2dpi | SCENE= }} | {{STRUCTURE_2dpi| PDB=2dpi | SCENE= }} | ||
===Ternary complex of hPoli with DNA and dCTP=== | ===Ternary complex of hPoli with DNA and dCTP=== | ||
| - | |||
| - | <!-- | ||
| - | The line below this paragraph, {{ABSTRACT_PUBMED_16819516}}, adds the Publication Abstract to the page | ||
| - | (as it appears on PubMed at http://www.pubmed.gov), where 16819516 is the PubMed ID number. | ||
| - | --> | ||
{{ABSTRACT_PUBMED_16819516}} | {{ABSTRACT_PUBMED_16819516}} | ||
==About this Structure== | ==About this Structure== | ||
| - | + | [[2dpi]] is a 3 chain structure of [[DNA polymerase]] with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DPI OCA]. | |
| + | |||
| + | ==See Also== | ||
| + | *[[DNA polymerase|DNA polymerase]] | ||
==Reference== | ==Reference== | ||
| - | <ref group="xtra">PMID: | + | <ref group="xtra">PMID:016819516</ref><references group="xtra"/> |
[[Category: DNA-directed DNA polymerase]] | [[Category: DNA-directed DNA polymerase]] | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
| Line 34: | Line 25: | ||
[[Category: Ethenoda adduct]] | [[Category: Ethenoda adduct]] | ||
[[Category: Lesion bypass]] | [[Category: Lesion bypass]] | ||
| - | + | [[Category: Transferase-dna complex]] | |
| - | + | ||
Revision as of 07:36, 26 July 2012
Contents |
Ternary complex of hPoli with DNA and dCTP
Template:ABSTRACT PUBMED 16819516
About this Structure
2dpi is a 3 chain structure of DNA polymerase with sequence from Homo sapiens. Full crystallographic information is available from OCA.
See Also
Reference
- Nair DT, Johnson RE, Prakash L, Prakash S, Aggarwal AK. Hoogsteen base pair formation promotes synthesis opposite the 1,N6-ethenodeoxyadenosine lesion by human DNA polymerase iota. Nat Struct Mol Biol. 2006 Jul;13(7):619-25. Epub 2006 Jul 2. PMID:16819516 doi:10.1038/nsmb1118
