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Template:STRUCTURE 1mel

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(New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1mel, resolution 2.5&Aring; (<scene name='initialview01'>initial scene</scene>) |SITE= |LIGAND= |ACTIVITY= <span class='pl...)
Current revision (09:32, 26 July 2012) (edit) (undo)
 
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{{Structure
{{Structure
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|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1mel, resolution 2.5&Aring; (<scene name='initialview01'>initial scene</scene>)
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|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1mel]], [[Resolution|resolution]] 2.50&Aring; (<scene name='initialview01'>default scene</scene>)}}}
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|SITE=
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|LIGAND=
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span>
|GENE= ANTIBODY VH FRAGMENT CAB-LYS3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9838 Camelus dromedarius]), ANTIBODY VH FRAGMENT CAB-LYS3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9031 Gallus gallus])
|GENE= ANTIBODY VH FRAGMENT CAB-LYS3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9838 Camelus dromedarius]), ANTIBODY VH FRAGMENT CAB-LYS3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9031 Gallus gallus])
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00099 IGv], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00119 LYZ1]</span>
 
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|RELATEDENTRY=
 
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1mel FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mel OCA], [http://www.ebi.ac.uk/pdbsum/1mel PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1mel RCSB]</span>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1mel FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mel OCA], [http://www.ebi.ac.uk/pdbsum/1mel PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1mel RCSB]</span>
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|FUNCTION={{GO|id=GO:0003824 | text = catalytic activity}}{{GO|id=GO:0003796 | text = lysozyme activity}}{{GO|id=GO:0016798 | text = hydrolase activity, acting on glycosyl bonds}}{{GO|id=GO:0016787 | text = hydrolase activity}}
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|PROCESS={{GO|id=GO:0016998 | text = cell wall catabolic process}}{{GO|id=GO:0008152 | text = metabolic process}}{{GO|id=GO:0042742 | text = defense response to bacterium}}{{GO|id=GO:0019835 | text = cytolysis}}
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|COMPONENT={{GO|id=GO:0005576 | text = extracellular region}}
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|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1melA00 1Mela00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1melB00 1Melb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1melL00 1Mell00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1melM00 1Melm00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000974 Ipr000974], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001916 Ipr001916]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00062 PF00062]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=36291 d1mell_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=36292 d1melm_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00698 P00698]</span>
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|uPDB=1MEL|CONSURF={{!}}-
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{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
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{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
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{{!}} '''Toggle Conservation Colors:'''
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{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
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Rows = identical sequences:
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<jmol>
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<jmolButton>
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<script></script>
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<text>A [x]</text>
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<name>jmb_1mel_A</name>
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<title>toggle chain A</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
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<script></script>
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<text>B [x]</text>
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<name>jmb_1mel_B</name>
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<title>toggle chain B</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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 +
<jmol>
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<jmolButton>
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<script></script>
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<text>C [x]</text>
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<name>jmb_1mel_C</name>
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<title>toggle chain C</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
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<script></script>
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<text>D [x]</text>
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<name>jmb_1mel_D</name>
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<title>toggle chain D</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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}}
}}

Current revision

Drag the structure with the mouse to rotate
1mel, resolution 2.50Å ()
Gene: ANTIBODY VH FRAGMENT CAB-LYS3 (Camelus dromedarius), ANTIBODY VH FRAGMENT CAB-LYS3 (Gallus gallus)
Activity: Lysozyme, with EC number 3.2.1.17
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml


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