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Template:STRUCTURE 1f88

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Current revision

1f88, resolution 2.80Å ()

Ligands:

, , , ,

Structural annotation:
Resources:	CATH : 1F88A00, 1F88B00 InterPro : Ipr000276, Ipr019477, Ipr017452, Ipr001760, Ipr000732 Pfam : PF00001, PF10413 SCOP : d1f88a_, d1f88b_ UniProt : P02699

Evolutionary conservation:

Toggle Conservation Colors:	Rows = identical sequences:
Further Information:	Caveats, Explanation, Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1f88"

@@ Line 1: / Line 1: @@
-{{StructureD
+{{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1f88, resolution 2.80&Aring; (<scene name='initialview01'>initial scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1f88]], [[Resolution|resolution]] 2.80&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-|LIGAND= <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
+|LIGAND= <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00001 7tm_1]</span>
-|NONSTDRES=<scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>
 |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1f88 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f88 OCA], [http://www.ebi.ac.uk/pdbsum/1f88 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1f88 RCSB]</span>
-|FUNCTION={{GO|id=GO:0009881 | text = photoreceptor activity}}{{GO|id=GO:0001584 | text = rhodopsin-like receptor activity}}{{GO|id=GO:0004930 | text = G-protein coupled receptor activity}}{{GO|id=GO:0004872 | text = receptor activity}}{{GO|id=GO:0004871 | text = signal transducer activity}}
+|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/1f88A00 1F88A00], [http://www.cathdb.info/domain/1f88B00 1F88B00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000276 Ipr000276], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR019477 Ipr019477], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017452 Ipr017452], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001760 Ipr001760], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000732 Ipr000732]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00001 PF00001], [http://pfam.sanger.ac.uk/family?acc=PF10413 PF10413]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=43429 d1f88a_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=43430 d1f88b_]<br>UniProt : [http://www.uniprot.org/uniprot/P02699 P02699]</span>
-|PROCESS={{GO|id=GO:0007601 | text = visual perception}}{{GO|id=GO:0007186 | text = G-protein coupled receptor protein signaling pathway}}{{GO|id=GO:0050896 | text = response to stimulus}}{{GO|id=GO:0007165 | text = signal transduction}}{{GO|id=GO:0007602 | text = phototransduction}}{{GO|id=GO:0018298 | text = protein-chromophore linkage}}
+|uPDB=1F88|CONSURF={{!}}-
-|COMPONENT={{GO|id=GO:0016020 | text = membrane}}{{GO|id=GO:0005886 | text = plasma membrane}}{{GO|id=GO:0016021 | text = integral to membrane}}{{GO|id=GO:0001750 | text = photoreceptor outer segment}}
+{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
-|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1f88A00 1F88A00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1f88B00 1F88B00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000276 Ipr000276], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001760 Ipr001760], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000732 Ipr000732]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00001 PF00001]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=43429 d1f88a_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=43430 d1f88b_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P02699 P02699]</span>
+{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
+{{!}} '''Toggle Conservation Colors:'''
+{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
+Rows = identical sequences:
+<jmol>
+<jmolButton>
+<script></script>
+<text>A [x]</text>
+<name>jmb_1f88_A</name>
+<title>toggle chain A</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>B [x]</text>
+<name>jmb_1f88_B</name>
+<title>toggle chain B</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
 }}

Template:STRUCTURE 1f88

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