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Template:STRUCTURE 1a6m
From Proteopedia
(Difference between revisions)
(New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1a6m, resolution 1.0Å (<scene name='initialview01'>initial scene</scene>) |SITE= |LIGAND= <scene name='pdbligand=HEM:...) |
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{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1a6m, resolution 1. | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1a6m]], [[Resolution|resolution]] 1.00Å (<scene name='initialview01'>default scene</scene>)}}} |
| - | + | ||
|LIGAND= <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> | |LIGAND= <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> | ||
| - | |ACTIVITY= | ||
| - | |GENE= | ||
| - | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01040 globin]</span> | ||
| - | |RELATEDENTRY= | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1a6m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1a6m OCA], [http://www.ebi.ac.uk/pdbsum/1a6m PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1a6m RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1a6m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1a6m OCA], [http://www.ebi.ac.uk/pdbsum/1a6m PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1a6m RCSB]</span> | ||
| + | |FUNCTION={{GO|id=GO:0019825 | text = oxygen binding}}{{GO|id=GO:0020037 | text = heme binding}}{{GO|id=GO:0005506 | text = iron ion binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0005344 | text = oxygen transporter activity}} | ||
| + | |PROCESS={{GO|id=GO:0006810 | text = transport}}{{GO|id=GO:0015671 | text = oxygen transport}} | ||
| + | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1a6m000 1A6M000]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009050 Ipr009050], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002335 Ipr002335], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012292 Ipr012292], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000971 Ipr000971]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00042 PF00042]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=15018 d1a6m__]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P02185 P02185]</span> | ||
| + | |uPDB=1A6M|CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_1a6m_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Current revision
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| 1a6m, resolution 1.00Å () | |||||||||
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| Ligands: | , , | ||||||||
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| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
