Template:STRUCTURE 1pfk
From Proteopedia
(Difference between revisions)
(New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1pfk, resolution 2.4Å (<scene name='initialview01'>initial scene</scene>) |SITE= |LIGAND= <scene name='pdbligand=ADP:...) |
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{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1pfk, resolution 2. | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1pfk]], [[Resolution|resolution]] 2.40Å (<scene name='initialview01'>default scene</scene>)}}} |
| - | + | |LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=FBP:BETA-FRUCTOSE-1,6-DIPHOSPHATE'>FBP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> | |
| - | |LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5 | + | |
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/6-phosphofructokinase 6-phosphofructokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.11 2.7.1.11] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/6-phosphofructokinase 6-phosphofructokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.11 2.7.1.11] </span> | ||
| - | |GENE= | ||
| - | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00763 Bacterial_PFK]</span> | ||
| - | |RELATEDENTRY= | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1pfk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pfk OCA], [http://www.ebi.ac.uk/pdbsum/1pfk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1pfk RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1pfk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pfk OCA], [http://www.ebi.ac.uk/pdbsum/1pfk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1pfk RCSB]</span> | ||
| + | |FUNCTION={{GO|id=GO:0003824 | text = catalytic activity}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0000166 | text = nucleotide binding}}{{GO|id=GO:0005524 | text = ATP binding}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0016301 | text = kinase activity}}{{GO|id=GO:0003872 | text = 6-phosphofructokinase activity}}{{GO|id=GO:0008443 | text = phosphofructokinase activity}}{{GO|id=GO:0016740 | text = transferase activity}}{{GO|id=GO:0000287 | text = magnesium ion binding}} | ||
| + | |PROCESS={{GO|id=GO:0006002 | text = fructose 6-phosphate metabolic process}}{{GO|id=GO:0006096 | text = glycolysis}} | ||
| + | |COMPONENT={{GO|id=GO:0005945 | text = 6-phosphofructokinase complex}}{{GO|id=GO:0005737 | text = cytoplasm}} | ||
| + | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkA01 1Pfka01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkA02 1Pfka02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkB02 1Pfkb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1pfkB01 1Pfkb01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015913 Ipr015913], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015912 Ipr015912], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012828 Ipr012828], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012003 Ipr012003], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000023 Ipr000023]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00365 PF00365]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35575 d1pfka_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=35576 d1pfkb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0A796 P0A796]</span> | ||
| + | |uPDB=1PFK|CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_1pfk_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>C [x]</text> | ||
| + | <name>jmb_1pfk_C</name> | ||
| + | <title>toggle chain C</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Current revision
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| 1pfk, resolution 2.40Å () | |||||||||
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| Ligands: | , , | ||||||||
| Activity: | 6-phosphofructokinase, with EC number 2.7.1.11 | ||||||||
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| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||

