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Template:STRUCTURE 1rcx

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(New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1rcx, resolution 2.4&Aring; (<scene name='initialview01'>initial scene</scene>) |SITE= <scene name='pdbsite=ACB:Active+Site'...)
Current revision (14:33, 27 July 2012) (edit) (undo)
 
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{{Structure
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1rcx, resolution 2.4&Aring; (<scene name='initialview01'>initial scene</scene>)
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1rcx]], [[Resolution|resolution]] 2.40&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-
|SITE= <scene name='pdbsite=ACB:Active+Site'>ACB</scene>, <scene name='pdbsite=ACE:Active+Site'>ACE</scene>, <scene name='pdbsite=ACH:Active+Site'>ACH</scene>, <scene name='pdbsite=ACK:Active+Site'>ACK</scene>, <scene name='pdbsite=ACL:Active+Site'>ACL</scene>, <scene name='pdbsite=ACO:Active+Site'>ACO</scene>, <scene name='pdbsite=ACR:Active+Site'>ACR</scene> and <scene name='pdbsite=ACV:Active+Site'>ACV</scene>
+
|LIGAND= <scene name='pdbligand=RUB:RIBULOSE-1,5-DIPHOSPHATE'>RUB</scene>
|LIGAND= <scene name='pdbligand=RUB:RIBULOSE-1,5-DIPHOSPHATE'>RUB</scene>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] </span>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribulose-bisphosphate_carboxylase Ribulose-bisphosphate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.39 4.1.1.39] </span>
-
|GENE=
 
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=CHL00040 rbcL], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00016 RuBisCO_large], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02788 RuBisCO_large_N], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03527 RuBisCO_small]</span>
 
-
|RELATEDENTRY=
 
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rcx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rcx OCA], [http://www.ebi.ac.uk/pdbsum/1rcx PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1rcx RCSB]</span>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rcx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rcx OCA], [http://www.ebi.ac.uk/pdbsum/1rcx PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1rcx RCSB]</span>
 +
|FUNCTION={{GO|id=GO:0016829 | text = lyase activity}}{{GO|id=GO:0000287 | text = magnesium ion binding}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0016984 | text = ribulose-bisphosphate carboxylase activity}}{{GO|id=GO:0004497 | text = monooxygenase activity}}{{GO|id=GO:0016491 | text = oxidoreductase activity}}
 +
|PROCESS={{GO|id=GO:0015977 | text = carbon utilization by fixation of carbon dioxide}}{{GO|id=GO:0015979 | text = photosynthesis}}{{GO|id=GO:0009853 | text = photorespiration}}{{GO|id=GO:0019253 | text = reductive pentose-phosphate cycle}}
 +
|COMPONENT={{GO|id=GO:0009507 | text = chloroplast}}{{GO|id=GO:0009573 | text = chloroplast ribulose bisphosphate carboxylase complex}}
 +
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxB02 1Rcxb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxB01 1Rcxb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxC00 1Rcxc00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxE01 1Rcxe01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxE02 1Rcxe02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxF00 1Rcxf00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxH02 1Rcxh02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxH01 1Rcxh01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxI00 1Rcxi00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxK02 1Rcxk02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxK01 1Rcxk01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxL01 1Rcxl01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxL02 1Rcxl02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxM00 1Rcxm00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxO02 1Rcxo02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxO01 1Rcxo01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxP00 1Rcxp00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxR02 1Rcxr02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxR01 1Rcxr01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxS00 1Rcxs00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxT00 1Rcxt00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxV01 1Rcxv01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxV02 1Rcxv02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rcxW00 1Rcxw00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000685 Ipr000685], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000894 Ipr000894]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00016 PF00016], [http://pfam.sanger.ac.uk/family?acc=PF02788 PF02788], [http://pfam.sanger.ac.uk/family?acc=PF00101 PF00101]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39271 d1rcxb2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=29365 d1rcxb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39655 d1rcxc_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39272 d1rcxe2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=29366 d1rcxe1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39656 d1rcxf_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39273 d1rcxh2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=29367 d1rcxh1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39657 d1rcxi_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39274 d1rcxk2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=29368 d1rcxk1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39270 d1rcxl2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=29364 d1rcxl1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39658 d1rcxm_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39275 d1rcxo2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=29369 d1rcxo1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39659 d1rcxp_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=29370 d1rcxr1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39276 d1rcxr2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39654 d1rcxs_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39660 d1rcxt_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39277 d1rcxv2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=29371 d1rcxv1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=39661 d1rcxw_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00875 P00875], [http://ca.expasy.org/cgi-bin/niceprot.pl?P00870 P00870]</span>
 +
|uPDB=1RCX|CONSURF={{!}}-
 +
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 +
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
 +
{{!}} '''Toggle Conservation Colors:'''
 +
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
 +
Rows = identical sequences:
 +
<jmol>
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<jmolButton>
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<script></script>
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<text>L [x]</text>
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<name>jmb_1rcx_L</name>
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<title>toggle chain L</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
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<script></script>
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<text>B [x]</text>
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<name>jmb_1rcx_B</name>
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<title>toggle chain B</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
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<script></script>
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<text>E [x]</text>
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<name>jmb_1rcx_E</name>
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<title>toggle chain E</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
 +
<script></script>
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<text>H [x]</text>
 +
<name>jmb_1rcx_H</name>
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<title>toggle chain H</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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<jmol>
 +
<jmolButton>
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<script></script>
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<text>K [x]</text>
 +
<name>jmb_1rcx_K</name>
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<title>toggle chain K</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
 +
<script></script>
 +
<text>O [x]</text>
 +
<name>jmb_1rcx_O</name>
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<title>toggle chain O</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
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<script></script>
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<text>R [x]</text>
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<name>jmb_1rcx_R</name>
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<title>toggle chain R</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
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<script></script>
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<text>V [x]</text>
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<name>jmb_1rcx_V</name>
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<title>toggle chain V</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
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<script></script>
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<text>S [x]</text>
 +
<name>jmb_1rcx_S</name>
 +
<title>toggle chain S</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
 +
<script></script>
 +
<text>C [x]</text>
 +
<name>jmb_1rcx_C</name>
 +
<title>toggle chain C</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
 +
</jmol>
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<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>F [x]</text>
 +
<name>jmb_1rcx_F</name>
 +
<title>toggle chain F</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
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</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>I [x]</text>
 +
<name>jmb_1rcx_I</name>
 +
<title>toggle chain I</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>M [x]</text>
 +
<name>jmb_1rcx_M</name>
 +
<title>toggle chain M</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>P [x]</text>
 +
<name>jmb_1rcx_P</name>
 +
<title>toggle chain P</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>T [x]</text>
 +
<name>jmb_1rcx_T</name>
 +
<title>toggle chain T</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>W [x]</text>
 +
<name>jmb_1rcx_W</name>
 +
<title>toggle chain W</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
}}
}}

Current revision

Drag the structure with the mouse to rotate
1rcx, resolution 2.40Å ()
Ligands:
Activity: Ribulose-bisphosphate carboxylase, with EC number 4.1.1.39
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml


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OCA

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