This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1ivw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="1ivw" size="450" color="white" frame="true" align="right" spinBox="true" caption="1ivw, resolution 1.8&Aring;" /> '''Crystal structure of ...)
Line 1: Line 1:
-
[[Image:1ivw.gif|left|200px]]<br /><applet load="1ivw" size="450" color="white" frame="true" align="right" spinBox="true"
+
[[Image:1ivw.gif|left|200px]]<br /><applet load="1ivw" size="350" color="white" frame="true" align="right" spinBox="true"
caption="1ivw, resolution 1.8&Aring;" />
caption="1ivw, resolution 1.8&Aring;" />
'''Crystal structure of copper amine oxidase from Arthrobacter globiformis: Late intermediate in topaquinone biogenesis'''<br />
'''Crystal structure of copper amine oxidase from Arthrobacter globiformis: Late intermediate in topaquinone biogenesis'''<br />
==Overview==
==Overview==
-
The quinone cofactor TPQ in copper amine oxidase is generated by, posttranslational modification of an active site tyrosine residue. Using, X-ray crystallography, we have probed the copper-dependent autooxidation, process of TPQ in the enzyme from Arthrobacter globiformis. Apo enzyme, crystals were anaerobically soaked with copper; the structure determined, from this crystal provides a view of the initial state: the unmodified, tyrosine coordinated to the bound copper. Exposure of the copper-bound, crystals to oxygen led to the formation of freeze-trapped intermediates;, structural analyses indicate that these intermediates contain, dihydroxyphenylalanine quinone and trihydroxyphenylalanine. These are the, first visualized intermediates during TPQ biogenesis in copper amine, oxidase.
+
The quinone cofactor TPQ in copper amine oxidase is generated by posttranslational modification of an active site tyrosine residue. Using X-ray crystallography, we have probed the copper-dependent autooxidation process of TPQ in the enzyme from Arthrobacter globiformis. Apo enzyme crystals were anaerobically soaked with copper; the structure determined from this crystal provides a view of the initial state: the unmodified tyrosine coordinated to the bound copper. Exposure of the copper-bound crystals to oxygen led to the formation of freeze-trapped intermediates; structural analyses indicate that these intermediates contain dihydroxyphenylalanine quinone and trihydroxyphenylalanine. These are the first visualized intermediates during TPQ biogenesis in copper amine oxidase.
==About this Structure==
==About this Structure==
-
1IVW is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis] with CU as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Amine_oxidase_(copper-containing) Amine oxidase (copper-containing)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.3.6 1.4.3.6] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1IVW OCA].
+
1IVW is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis] with <scene name='pdbligand=CU:'>CU</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Amine_oxidase_(copper-containing) Amine oxidase (copper-containing)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.3.6 1.4.3.6] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IVW OCA].
==Reference==
==Reference==
Line 31: Line 31:
[[Category: tpq]]
[[Category: tpq]]
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 17:42:46 2007''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 13:16:21 2008''

Revision as of 11:16, 21 February 2008


1ivw, resolution 1.8Å

Drag the structure with the mouse to rotate

Crystal structure of copper amine oxidase from Arthrobacter globiformis: Late intermediate in topaquinone biogenesis

Overview

The quinone cofactor TPQ in copper amine oxidase is generated by posttranslational modification of an active site tyrosine residue. Using X-ray crystallography, we have probed the copper-dependent autooxidation process of TPQ in the enzyme from Arthrobacter globiformis. Apo enzyme crystals were anaerobically soaked with copper; the structure determined from this crystal provides a view of the initial state: the unmodified tyrosine coordinated to the bound copper. Exposure of the copper-bound crystals to oxygen led to the formation of freeze-trapped intermediates; structural analyses indicate that these intermediates contain dihydroxyphenylalanine quinone and trihydroxyphenylalanine. These are the first visualized intermediates during TPQ biogenesis in copper amine oxidase.

About this Structure

1IVW is a Single protein structure of sequence from Arthrobacter globiformis with as ligand. Active as Amine oxidase (copper-containing), with EC number 1.4.3.6 Full crystallographic information is available from OCA.

Reference

X-ray snapshots of quinone cofactor biogenesis in bacterial copper amine oxidase., Kim M, Okajima T, Kishishita S, Yoshimura M, Kawamori A, Tanizawa K, Yamaguchi H, Nat Struct Biol. 2002 Aug;9(8):591-6. PMID:12134140

Page seeded by OCA on Thu Feb 21 13:16:21 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools