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Template:STRUCTURE 1dv7
From Proteopedia
(Difference between revisions)
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{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1dv7]], resolution 1.80Å (<scene name='initialview01'>default scene</scene>)}}} | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1dv7]], [[Resolution|resolution]] 1.80Å (<scene name='initialview01'>default scene</scene>)}}} |
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Orotidine-5'-phosphate_decarboxylase Orotidine-5'-phosphate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.23 4.1.1.23] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Orotidine-5'-phosphate_decarboxylase Orotidine-5'-phosphate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.23 4.1.1.23] </span> | ||
| - | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd04725 OMP_decarboxylase_like]</span> | ||
|RELATEDENTRY=[[1dvj|1dvj]] | |RELATEDENTRY=[[1dvj|1dvj]] | ||
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dv7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dv7 OCA], [http://www. | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1dv7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dv7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1dv7 RCSB], [http://www.ebi.ac.uk/pdbsum/1dv7 PDBsum], [http://www.topsan.org/Proteins/NESGC/1dv7 TOPSAN]</span> |
|FUNCTION={{GO|id=GO:0016831 | text = carboxy-lyase activity}}{{GO|id=GO:0004590 | text = orotidine-5'-phosphate decarboxylase activity}}{{GO|id=GO:0003824 | text = catalytic activity}}{{GO|id=GO:0016829 | text = lyase activity}} | |FUNCTION={{GO|id=GO:0016831 | text = carboxy-lyase activity}}{{GO|id=GO:0004590 | text = orotidine-5'-phosphate decarboxylase activity}}{{GO|id=GO:0003824 | text = catalytic activity}}{{GO|id=GO:0016829 | text = lyase activity}} | ||
|PROCESS={{GO|id=GO:0006221 | text = pyrimidine nucleotide biosynthetic process}}{{GO|id=GO:0006207 | text = 'de novo' pyrimidine base biosynthetic process}}{{GO|id=GO:0008152 | text = metabolic process}} | |PROCESS={{GO|id=GO:0006221 | text = pyrimidine nucleotide biosynthetic process}}{{GO|id=GO:0006207 | text = 'de novo' pyrimidine base biosynthetic process}}{{GO|id=GO:0008152 | text = metabolic process}} | ||
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1dv7A00 1Dv7A00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011060 Ipr011060], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014732 Ipr014732], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001754 Ipr001754], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013785 Ipr013785]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00215 PF00215]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=28550 d1dv7a_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?O26232 O26232]</span> | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1dv7A00 1Dv7A00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011060 Ipr011060], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014732 Ipr014732], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001754 Ipr001754], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013785 Ipr013785]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00215 PF00215]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=28550 d1dv7a_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?O26232 O26232]</span> | ||
| - | |CONSURF={{!}}- | + | |uPDB=1DV7|CONSURF={{!}}- |
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
{{!}} '''Toggle Conservation Colors:''' | {{!}} '''Toggle Conservation Colors:''' | ||
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| - | Rows = identical sequences: | ||
| - | <jmol> | ||
| - | <jmolButton> | ||
| - | <script></script> | ||
| - | <text>A [x]</text> | ||
| - | <name>jmb_1dv7_A</name> | ||
| - | <title>toggle chain A</title> | ||
| - | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| - | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| - | </jmolButton> | ||
| - | </jmol> | ||
}} | }} | ||
Current revision
| |||||||||
| 1dv7, resolution 1.80Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Activity: | Orotidine-5'-phosphate decarboxylase, with EC number 4.1.1.23 | ||||||||
| Related: | 1dvj | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, RCSB, PDBsum, TOPSAN | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
