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Template:STRUCTURE 1kar
From Proteopedia
(Difference between revisions)
(New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1kar, resolution 2.10Å (<scene name='initialview01'>initial scene</scene>) |SITE= |LIGAND= <scene name='pdbligand=HSM...) |
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{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1kar, resolution 2.10Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1kar]], [[Resolution|resolution]] 2.10Å (<scene name='initialview01'>default scene</scene>)}}} |
| - | + | |LIGAND= <scene name='pdbligand=HSM:HISTAMINE'>HSM</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> | |
| - | |LIGAND= <scene name='pdbligand=HSM:HISTAMINE'>HSM | + | |
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Histidinol_dehydrogenase Histidinol dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.23 1.1.1.23] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Histidinol_dehydrogenase Histidinol dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.23 1.1.1.23] </span> | ||
|GENE= HISD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]) | |GENE= HISD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]) | ||
| - | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00815 Histidinol_dh], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0141 HisD]</span> | ||
|RELATEDENTRY=[[1k75|1k75]], [[1kae|1kae]], [[1kah|1kah]] | |RELATEDENTRY=[[1k75|1k75]], [[1kae|1kae]], [[1kah|1kah]] | ||
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kar FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kar OCA], [http://www.ebi.ac.uk/pdbsum/1kar PDBsum], [http://www. | + | |NONSTDRES=<scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene> |
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kar FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kar OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1kar RCSB], [http://www.ebi.ac.uk/pdbsum/1kar PDBsum]</span> | ||
| + | |FUNCTION={{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0051287 | text = NAD binding}}{{GO|id=GO:0004399 | text = histidinol dehydrogenase activity}}{{GO|id=GO:0016491 | text = oxidoreductase activity}}{{GO|id=GO:0008270 | text = zinc ion binding}} | ||
| + | |PROCESS={{GO|id=GO:0000105 | text = histidine biosynthetic process}}{{GO|id=GO:0008652 | text = amino acid biosynthetic process}} | ||
| + | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1karA02 1Kara02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1karA01 1Kara01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1karB01 1Karb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1karB02 1Karb02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012131 Ipr012131], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001692 Ipr001692]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00815 PF00815]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=72264 d1kara_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=72265 d1karb_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P06988 P06988]</span> | ||
| + | |uPDB=1KAR|CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_1kar_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_1kar_B</name> | ||
| + | <title>toggle chain B</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Current revision
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| 1kar, resolution 2.10Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | , | ||||||||
| Non-Standard Residues: | |||||||||
| Gene: | HISD (Escherichia coli) | ||||||||
| Activity: | Histidinol dehydrogenase, with EC number 1.1.1.23 | ||||||||
| Related: | 1k75, 1kae, 1kah | ||||||||
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| Resources: | FirstGlance, OCA, RCSB, PDBsum | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
