This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 1vc2
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1vc2]], resolution 2.60Å (<scene name='initialview01'>default scene</scene>)}}} | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1vc2]], [[Resolution|resolution]] 2.60Å (<scene name='initialview01'>default scene</scene>)}}} |
|LIGAND= <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene> | |LIGAND= <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene> | ||
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Glyceraldehyde-3-phosphate_dehydrogenase_(phosphorylating) Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.12 1.2.1.12] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Glyceraldehyde-3-phosphate_dehydrogenase_(phosphorylating) Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.12 1.2.1.12] </span> | ||
| - | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vc2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vc2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vc2 RCSB], [http://www.ebi.ac.uk/pdbsum/1vc2 PDBsum], [http://www.topsan.org/Proteins/RSGI/1vc2 TOPSAN]</span> | |
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vc2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vc2 OCA], [http://www. | + | |
|FUNCTION={{GO|id=GO:0051287 | text = NAD binding}}{{GO|id=GO:0016491 | text = oxidoreductase activity}}{{GO|id=GO:0004365 | text = glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity}}{{GO|id=GO:0008943 | text = glyceraldehyde-3-phosphate dehydrogenase activity}} | |FUNCTION={{GO|id=GO:0051287 | text = NAD binding}}{{GO|id=GO:0016491 | text = oxidoreductase activity}}{{GO|id=GO:0004365 | text = glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity}}{{GO|id=GO:0008943 | text = glyceraldehyde-3-phosphate dehydrogenase activity}} | ||
|PROCESS={{GO|id=GO:0006096 | text = glycolysis}}{{GO|id=GO:0006006 | text = glucose metabolic process}} | |PROCESS={{GO|id=GO:0006096 | text = glycolysis}}{{GO|id=GO:0006006 | text = glucose metabolic process}} | ||
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1vc2A01 1Vc2A01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1vc2A02 1Vc2A02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006424 Ipr006424], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000173 Ipr000173]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00044 PF00044], [http://pfam.sanger.ac.uk/family?acc=PF02800 PF02800]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=100555 d1vc2a1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=100556 d1vc2a2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P84125 P84125]</span> | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1vc2A01 1Vc2A01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1vc2A02 1Vc2A02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006424 Ipr006424], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000173 Ipr000173]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00044 PF00044], [http://pfam.sanger.ac.uk/family?acc=PF02800 PF02800]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=100555 d1vc2a1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=100556 d1vc2a2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P84125 P84125]</span> | ||
| - | |CONSURF={{!}}- | + | |uPDB=1VC2|CONSURF={{!}}- |
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
Current revision
| |||||||||
| 1vc2, resolution 2.60Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | |||||||||
| Activity: | Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating), with EC number 1.2.1.12 | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, RCSB, PDBsum, TOPSAN | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
