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Template:STRUCTURE 1h0m

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m (Protected "Template:STRUCTURE 1h0m" [edit=sysop:move=sysop])
Current revision (09:48, 16 January 2013) (edit) (undo)
 
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{{Structure
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1h0m, resolution 3.00&Aring; (<scene name='initialview01'>initial scene</scene>)
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1h0m]], [[Resolution|resolution]] 3.00&Aring; (<scene name='initialview01'>default scene</scene>)}}}
-
|SITE= <scene name='pdbsite=AA1:Hsl+And+Ooa+Binding+Site+For+Chain+D'>AA1</scene>
+
|LIGAND= <scene name='pdbligand=HSL:HOMOSERINE+LACTONE'>HSL</scene>, <scene name='pdbligand=OOA:3-OXOOCTANOIC+ACID'>OOA</scene>
-
|LIGAND= <scene name='pdbligand=DA:2&#39;-DEOXYADENOSINE-5&#39;-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2&#39;-DEOXYCYTIDINE-5&#39;-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2&#39;-DEOXYGUANOSINE-5&#39;-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5&#39;-MONOPHOSPHATE'>DT</scene>, <scene name='pdbligand=HSL:HOMOSERINE+LACTONE'>HSL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=OOA:3-OXOOCTANOIC+ACID'>OOA</scene>
+
|RELATEDENTRY=[[1l3l|1l3l]]
-
|ACTIVITY=
+
|NONSTDRES=<scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
-
|GENE=
+
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1h0m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1h0m OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1h0m RCSB], [http://www.ebi.ac.uk/pdbsum/1h0m PDBsum]</span>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00196 GerE], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam03472 Autoind_bind]</span>
+
|FUNCTION={{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0043565 | text = sequence-specific DNA binding}}
-
|RELATEDENTRY=
+
|PROCESS={{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}{{GO|id=GO:0000746 | text = conjugation}}{{GO|id=GO:0006350 | text = transcription}}{{GO|id=GO:0009372 | text = quorum sensing}}
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1h0m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1h0m OCA], [http://www.ebi.ac.uk/pdbsum/1h0m PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1h0m RCSB]</span>
+
|COMPONENT={{GO|id=GO:0005622 | text = intracellular}}
 +
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h0mA01 1H0Ma01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h0mA02 1H0Ma02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h0mB02 1H0Mb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h0mB01 1H0Mb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h0mC01 1H0Mc01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h0mC02 1H0Mc02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h0mD01 1H0Md01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1h0mD02 1H0Md02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000792 Ipr000792], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011991 Ipr011991], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005143 Ipr005143]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03472 PF03472], [http://pfam.sanger.ac.uk/family?acc=PF00196 PF00196]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=76442 d1h0ma1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=76443 d1h0ma2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=76444 d1h0mb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=76445 d1h0mb2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=76447 d1h0mc2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=76446 d1h0mc1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=76448 d1h0md1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=76449 d1h0md2]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P33905 P33905]</span>
 +
|uPDB=1H0M|CONSURF={{!}}-
 +
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
 +
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
 +
{{!}} '''Toggle Conservation Colors:'''
 +
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
 +
Rows = identical sequences:
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>A [x]</text>
 +
<name>jmb_1h0m_A</name>
 +
<title>toggle chain A</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>B [x]</text>
 +
<name>jmb_1h0m_B</name>
 +
<title>toggle chain B</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>C [x]</text>
 +
<name>jmb_1h0m_C</name>
 +
<title>toggle chain C</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>D [x]</text>
 +
<name>jmb_1h0m_D</name>
 +
<title>toggle chain D</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
 
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>E [x]</text>
 +
<name>jmb_1h0m_E</name>
 +
<title>toggle chain E</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>F [x]</text>
 +
<name>jmb_1h0m_F</name>
 +
<title>toggle chain F</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>G [x]</text>
 +
<name>jmb_1h0m_G</name>
 +
<title>toggle chain G</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>H [x]</text>
 +
<name>jmb_1h0m_H</name>
 +
<title>toggle chain H</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
 
}}
}}

Current revision

Drag the structure with the mouse to rotate
1h0m, resolution 3.00Å ()
Ligands: ,
Non-Standard Residues:
Related: 1l3l
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


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