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Template:STRUCTURE 3glf

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(New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|3glf, resolution 3.39&Aring; (<scene name='initialview01'>default scene</scene>)}...)
Current revision (11:31, 30 January 2013) (edit) (undo)
 
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{{Structure
{{Structure
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|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[3glf]], [[Resolution | resolution]] 3.39&Aring; (<scene name='initialview01'>default scene</scene>)}}}
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|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[3glf]], [[Resolution|resolution]] 3.39&Aring; (<scene name='initialview01'>default scene</scene>)}}}
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|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Adp+B+400'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Bef+B+401'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Adp+C+402'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Bef+C+403'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Adp+D+404'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Bef+D+405'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Adp+G+406'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+Bef+G+407'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Adp+H+408'>AC9</scene>, <scene name='pdbsite=BC1:Binding+Site+For+Residue+Bef+H+409'>BC1</scene>, <scene name='pdbsite=BC2:Binding+Site+For+Residue+Adp+I+410'>BC2</scene>, <scene name='pdbsite=BC3:Binding+Site+For+Residue+Bef+I+411'>BC3</scene>, <scene name='pdbsite=BC4:Binding+Site+For+Residue+Mg+B+412'>BC4</scene>, <scene name='pdbsite=BC5:Binding+Site+For+Residue+Mg+C+413'>BC5</scene>, <scene name='pdbsite=BC6:Binding+Site+For+Residue+Mg+D+414'>BC6</scene>, <scene name='pdbsite=BC7:Binding+Site+For+Residue+Mg+G+415'>BC7</scene>, <scene name='pdbsite=BC8:Binding+Site+For+Residue+Mg+H+416'>BC8</scene>, <scene name='pdbsite=BC9:Binding+Site+For+Residue+Mg+I+417'>BC9</scene>, <scene name='pdbsite=CC1:Binding+Site+For+Residue+Zn+B+418'>CC1</scene>, <scene name='pdbsite=CC2:Binding+Site+For+Residue+Zn+C+419'>CC2</scene>, <scene name='pdbsite=CC3:Binding+Site+For+Residue+Zn+D+420'>CC3</scene>, <scene name='pdbsite=CC4:Binding+Site+For+Residue+Zn+E+421'>CC4</scene>, <scene name='pdbsite=CC5:Binding+Site+For+Residue+Zn+G+422'>CC5</scene>, <scene name='pdbsite=CC6:Binding+Site+For+Residue+Zn+H+423'>CC6</scene>, <scene name='pdbsite=CC7:Binding+Site+For+Residue+Zn+I+424'>CC7</scene> and <scene name='pdbsite=CC8:Binding+Site+For+Residue+Zn+J+425'>CC8</scene>
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|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=BEF:BERYLLIUM+TRIFLUORIDE+ION'>BEF</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=BEF:BERYLLIUM+TRIFLUORIDE+ION'>BEF</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7] </span>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7] </span>
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|GENE= holA, b0640, JW0635 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]), dnaX, dnaZ, dnaZX, b0470, JW0459 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]), holB, b1099, JW1085 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
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|GENE= holA, b0640, JW0635 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 Escherichia coli K-12]), dnaX, dnaZ, dnaZX, b0470, JW0459 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 Escherichia coli K-12]), holB, b1099, JW1085 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 Escherichia coli K-12])
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK05574 holA], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK07993 PRK07993], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK06581 PRK06581], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam09115 DNApol3-delta_C]</span>
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|RELATEDENTRY=[[1sxj|1sxj]], [[1jr3|1jr3]], [[1xxh|1xxh]], [[1xxi|1xxi]], [[3glg|3glg]], [[3glh|3glh]], [[3gli|3gli]]
|RELATEDENTRY=[[1sxj|1sxj]], [[1jr3|1jr3]], [[1xxh|1xxh]], [[1xxi|1xxi]], [[3glg|3glg]], [[3glh|3glh]], [[3gli|3gli]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3glf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3glf OCA], [http://www.ebi.ac.uk/pdbsum/3glf PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3glf RCSB]</span>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3glf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3glf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3glf RCSB], [http://www.ebi.ac.uk/pdbsum/3glf PDBsum]</span>
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|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/3glfA01 3Glfa01], [http://www.cathdb.info/domain/3glfA03 3Glfa03], [http://www.cathdb.info/domain/3glfA02 3Glfa02], [http://www.cathdb.info/domain/3glfB02 3Glfb02], [http://www.cathdb.info/domain/3glfB03 3Glfb03], [http://www.cathdb.info/domain/3glfB01 3Glfb01], [http://www.cathdb.info/domain/3glfC03 3Glfc03], [http://www.cathdb.info/domain/3glfC01 3Glfc01], [http://www.cathdb.info/domain/3glfC02 3Glfc02], [http://www.cathdb.info/domain/3glfD01 3Glfd01], [http://www.cathdb.info/domain/3glfD02 3Glfd02], [http://www.cathdb.info/domain/3glfD03 3Glfd03], [http://www.cathdb.info/domain/3glfE01 3Glfe01], [http://www.cathdb.info/domain/3glfE03 3Glfe03], [http://www.cathdb.info/domain/3glfE02 3Glfe02], [http://www.cathdb.info/domain/3glfF03 3Glff03], [http://www.cathdb.info/domain/3glfF02 3Glff02], [http://www.cathdb.info/domain/3glfF01 3Glff01], [http://www.cathdb.info/domain/3glfG01 3Glfg01], [http://www.cathdb.info/domain/3glfG03 3Glfg03], [http://www.cathdb.info/domain/3glfG02 3Glfg02], [http://www.cathdb.info/domain/3glfH02 3Glfh02], [http://www.cathdb.info/domain/3glfH03 3Glfh03], [http://www.cathdb.info/domain/3glfH01 3Glfh01], [http://www.cathdb.info/domain/3glfI02 3Glfi02], [http://www.cathdb.info/domain/3glfI03 3Glfi03], [http://www.cathdb.info/domain/3glfI01 3Glfi01], [http://www.cathdb.info/domain/3glfJ01 3Glfj01], [http://www.cathdb.info/domain/3glfJ02 3Glfj02], [http://www.cathdb.info/domain/3glfJ03 3Glfj03]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008921 Ipr008921], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR010372 Ipr010372], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005790 Ipr005790], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR022001 Ipr022001], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR021029 Ipr021029], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003593 Ipr003593], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001270 Ipr001270], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR022754 Ipr022754], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012763 Ipr012763], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015199 Ipr015199], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004622 Ipr004622]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF06144 PF06144], [http://pfam.sanger.ac.uk/family?acc=PF00004 PF00004], [http://pfam.sanger.ac.uk/family?acc=PF12169 PF12169], [http://pfam.sanger.ac.uk/family?acc=PF09115 PF09115]</span>
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|uPDB=3GLF|CONSURF={{!}}-
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{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
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{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
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{{!}} '''Toggle Conservation Colors:'''
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{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
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Rows = identical sequences:
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}}
}}

Current revision

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3glf, resolution 3.39Å ()
Ligands: , , ,
Gene: holA, b0640, JW0635 (Escherichia coli K-12), dnaX, dnaZ, dnaZX, b0470, JW0459 (Escherichia coli K-12), holB, b1099, JW1085 (Escherichia coli K-12)
Activity: DNA-directed DNA polymerase, with EC number 2.7.7.7
Related: 1sxj, 1jr3, 1xxh, 1xxi, 3glg, 3glh, 3gli
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


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