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Template:STRUCTURE 1qln

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Current revision

1qln, resolution 2.40Å ()

Non-Standard Residues:

Activity:

DNA-directed RNA polymerase, with EC number 2.7.7.6

Related:

1aro, 4rnp, 1cez

Structural annotation:
Resources:	CATH : 1Qlna04, 1Qlna02, 1Qlna03, 1Qlna05, 1Qlna01 InterPro : Ipr002092 Pfam : PF00940 SCOP : d1qlna_ UniProt : P00573

Functional annotation:
Biological process:	transcription
Molecular function:	DNA-directed RNA polymerase activity nucleotidyltransferase activity DNA binding transferase activity protein binding

Evolutionary conservation:

Toggle Conservation Colors:

Rows = identical sequences:

Further Information:

Caveats,

Explanation,
Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, RCSB, PDBsum

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1qln"

@@ Line 1: / Line 1: @@
-{{StructureD
+{{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1qln, resolution 2.40&Aring; (<scene name='initialview01'>initial scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1qln]], [[Resolution|resolution]] 2.40&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA-directed_RNA_polymerase DNA-directed RNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.6 2.7.7.6] </span>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00940 RNA_pol], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00076 RRM_1], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00360 RRM]</span>
+|RELATEDENTRY=[[1aro|1aro]], [[4rnp|4rnp]], [[1cez|1cez]]
 |NONSTDRES=<scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1qln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qln OCA], [http://www.ebi.ac.uk/pdbsum/1qln PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1qln RCSB]</span>
+|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1qln FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qln OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1qln RCSB], [http://www.ebi.ac.uk/pdbsum/1qln PDBsum]</span>
 |FUNCTION={{GO|id=GO:0003899 | text = DNA-directed RNA polymerase activity}}{{GO|id=GO:0016779 | text = nucleotidyltransferase activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0016740 | text = transferase activity}}{{GO|id=GO:0005515 | text = protein binding}}
 |PROCESS={{GO|id=GO:0006350 | text = transcription}}
 |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1qlnA04 1Qlna04], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1qlnA02 1Qlna02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1qlnA03 1Qlna03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1qlnA05 1Qlna05], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1qlnA01 1Qlna01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002092 Ipr002092]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00940 PF00940]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=43111 d1qlna_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00573 P00573]</span>
+|uPDB=1QLN|CONSURF={{!}}-
+{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
+{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
+{{!}} '''Toggle Conservation Colors:'''
+{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
+Rows = identical sequences:
+<jmol>
+<jmolButton>
+<script></script>
+<text>A [x]</text>
+<name>jmb_1qln_A</name>
+<title>toggle chain A</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>B [x]</text>
+<name>jmb_1qln_B</name>
+<title>toggle chain B</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>C [x]</text>
+<name>jmb_1qln_C</name>
+<title>toggle chain C</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>D [x]</text>
+<name>jmb_1qln_D</name>
+<title>toggle chain D</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
 }}

Template:STRUCTURE 1qln

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