This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 3a8z
From Proteopedia
(Difference between revisions)
(New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|3a8z, resolution 1.40Å (<scene name='initialview01'>default scene</scene>)}}}...) |
|||
| (2 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[3a8z]], [[Resolution|resolution]] 1.40Å (<scene name='initialview01'>default scene</scene>)}}} | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[3a8z]], [[Resolution|resolution]] 1.40Å (<scene name='initialview01'>default scene</scene>)}}} | ||
| - | |SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Na+A+130'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Cl+A+131'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Cl+A+132'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Cl+A+133'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Cl+A+134'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Cl+A+135'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Cl+A+136'>AC7</scene>, <scene name='pdbsite=AC8:Binding+Site+For+Residue+Cl+A+137'>AC8</scene>, <scene name='pdbsite=AC9:Binding+Site+For+Residue+Gol+A+138'>AC9</scene> and <scene name='pdbsite=BC1:Binding+Site+For+Residue+Gol+A+139'>BC1</scene> | ||
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene> | |LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene> | ||
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span> | ||
| - | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00119 LYZ1]</span> | ||
|RELATEDENTRY=[[3a90|3a90]], [[3a91|3a91]], [[3a92|3a92]], [[3a93|3a93]], [[3a94|3a94]], [[3a95|3a95]], [[3a96|3a96]] | |RELATEDENTRY=[[3a90|3a90]], [[3a91|3a91]], [[3a92|3a92]], [[3a93|3a93]], [[3a94|3a94]], [[3a95|3a95]], [[3a96|3a96]] | ||
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3a8z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a8z OCA], [http://www.ebi.ac.uk/pdbsum/3a8z PDBsum], [http://www. | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3a8z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a8z OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3a8z RCSB], [http://www.ebi.ac.uk/pdbsum/3a8z PDBsum]</span> |
| + | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/3a8zA00 3A8Za00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000974 Ipr000974], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR023346 Ipr023346], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR019799 Ipr019799], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001916 Ipr001916]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00062 PF00062]</span> | ||
| + | |uPDB=3A8Z|CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_3a8z_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Current revision
| |||||||||
| 3a8z, resolution 1.40Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | , , | ||||||||
| Activity: | Lysozyme, with EC number 3.2.1.17 | ||||||||
| Related: | 3a90, 3a91, 3a92, 3a93, 3a94, 3a95, 3a96 | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, RCSB, PDBsum | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||

