Template:STRUCTURE 1rjl
From Proteopedia
(Difference between revisions)
m (Protected "Template:STRUCTURE 1rjl" [edit=sysop:move=sysop]) |
|||
(3 intermediate revisions not shown.) | |||
Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
- | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1rjl, resolution 2.60Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1rjl]], [[Resolution|resolution]] 2.60Å (<scene name='initialview01'>default scene</scene>)}}} |
- | + | ||
- | + | ||
- | + | ||
|GENE= OSPB, BBA16 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=139 Borrelia burgdorferi]) | |GENE= OSPB, BBA16 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=139 Borrelia burgdorferi]) | ||
- | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00098 IGc], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00099 IGv], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam07686 V-set], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00820 Lipoprotein_1]</span> | ||
|RELATEDENTRY=[[1p4p|1p4p]], [[1fj1|1fj1]], [[1osp|1osp]] | |RELATEDENTRY=[[1p4p|1p4p]], [[1fj1|1fj1]], [[1osp|1osp]] | ||
- | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rjl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rjl OCA], [http://www.ebi.ac.uk/pdbsum/1rjl PDBsum], [http://www. | + | |NONSTDRES=<scene name='pdbligand=UNK:UNKNOWN'>UNK</scene> |
+ | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rjl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rjl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1rjl RCSB], [http://www.ebi.ac.uk/pdbsum/1rjl PDBsum]</span> | ||
+ | |COMPONENT={{GO|id=GO:0009279 | text = cell outer membrane}}{{GO|id=GO:0016020 | text = membrane}}{{GO|id=GO:0019867 | text = outer membrane}} | ||
+ | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rjlA02 1Rjla02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rjlA01 1Rjla01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rjlB01 1Rjlb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1rjlB02 1Rjlb02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001809 Ipr001809]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00820 PF00820]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P17739 P17739]</span> | ||
+ | |uPDB=1RJL|CONSURF={{!}}- | ||
+ | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
+ | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
+ | {{!}} '''Toggle Conservation Colors:''' | ||
+ | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
+ | Rows = identical sequences: | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>A [x]</text> | ||
+ | <name>jmb_1rjl_A</name> | ||
+ | <title>toggle chain A</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>B [x]</text> | ||
+ | <name>jmb_1rjl_B</name> | ||
+ | <title>toggle chain B</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>C [x]</text> | ||
+ | <name>jmb_1rjl_C</name> | ||
+ | <title>toggle chain C</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>D [x]</text> | ||
+ | <name>jmb_1rjl_D</name> | ||
+ | <title>toggle chain D</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
}} | }} |
Current revision
| |||||||||
1rjl, resolution 2.60Å () | |||||||||
---|---|---|---|---|---|---|---|---|---|
Non-Standard Residues: | |||||||||
Gene: | OSPB, BBA16 (Borrelia burgdorferi) | ||||||||
Related: | 1p4p, 1fj1, 1osp | ||||||||
| |||||||||
| |||||||||
| |||||||||
Resources: | FirstGlance, OCA, RCSB, PDBsum | ||||||||
Coordinates: | save as pdb, mmCIF, xml |