This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 1lcd
From Proteopedia
(Difference between revisions)
| (One intermediate revision not shown.) | |||
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1lcd]], [[NMR_Ensembles_of_Models | 3 NMR models]] (<scene name='initialview01'>default scene</scene>)}}} | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1lcd]], [[NMR_Ensembles_of_Models | 3 NMR models]] (<scene name='initialview01'>default scene</scene>)}}} | ||
| - | |SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Na+C+12'>AC1</scene> | ||
|LIGAND= <scene name='pdbligand=NA:SODIUM+ION'>NA</scene> | |LIGAND= <scene name='pdbligand=NA:SODIUM+ION'>NA</scene> | ||
| - | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00354 HTH_LACI]</span> | ||
|RELATEDENTRY=[[1lcc|1lcc]] | |RELATEDENTRY=[[1lcc|1lcc]] | ||
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lcd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lcd OCA], [http://www. | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lcd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lcd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1lcd RCSB], [http://www.ebi.ac.uk/pdbsum/1lcd PDBsum]</span> |
|FUNCTION={{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0005515 | text = protein binding}} | |FUNCTION={{GO|id=GO:0003700 | text = transcription factor activity}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0005515 | text = protein binding}} | ||
|PROCESS={{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}{{GO|id=GO:0006350 | text = transcription}} | |PROCESS={{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}{{GO|id=GO:0006350 | text = transcription}} | ||
| Line 19: | Line 17: | ||
<jmolButton> | <jmolButton> | ||
<script></script> | <script></script> | ||
| - | <text> | + | <text>B [x]</text> |
| - | <name> | + | <name>jmb_1lcd_B</name> |
| - | <title>toggle chain | + | <title>toggle chain B</title> |
<jsscript>ConsurfChainButton(elementClicked)</jsscript> | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
<appendtargetsuffixtoid>true</appendtargetsuffixtoid> | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| Line 30: | Line 28: | ||
<jmolButton> | <jmolButton> | ||
<script></script> | <script></script> | ||
| - | <text> | + | <text>C [x]</text> |
| - | <name> | + | <name>jmb_1lcd_C</name> |
| - | <title>toggle chain | + | <title>toggle chain C</title> |
<jsscript>ConsurfChainButton(elementClicked)</jsscript> | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
<appendtargetsuffixtoid>true</appendtargetsuffixtoid> | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| Line 41: | Line 39: | ||
<jmolButton> | <jmolButton> | ||
<script></script> | <script></script> | ||
| - | <text> | + | <text>A [x]</text> |
| - | <name> | + | <name>jmb_1lcd_A</name> |
| - | <title>toggle chain | + | <title>toggle chain A</title> |
<jsscript>ConsurfChainButton(elementClicked)</jsscript> | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
<appendtargetsuffixtoid>true</appendtargetsuffixtoid> | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
Current revision
| |||||||||
| 1lcd, 3 NMR models () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | |||||||||
| Related: | 1lcc | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, RCSB, PDBsum | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
