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Template:STRUCTURE 1gm5
From Proteopedia
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| - | {{ | + | {{Structure |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1gm5, resolution 3.24Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1gm5]], [[Resolution|resolution]] 3.24Å (<scene name='initialview01'>default scene</scene>)}}} |
| - | + | ||
|LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> | |LIGAND= <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> | ||
| - | + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gm5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1gm5 RCSB], [http://www.ebi.ac.uk/pdbsum/1gm5 PDBsum]</span> | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gm5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gm5 OCA], [http://www. | + | |
|FUNCTION={{GO|id=GO:0000166 | text = nucleotide binding}}{{GO|id=GO:0008026 | text = ATP-dependent helicase activity}}{{GO|id=GO:0004386 | text = helicase activity}}{{GO|id=GO:0003676 | text = nucleic acid binding}}{{GO|id=GO:0004003 | text = ATP-dependent DNA helicase activity}}{{GO|id=GO:0005524 | text = ATP binding}}{{GO|id=GO:0016787 | text = hydrolase activity}} | |FUNCTION={{GO|id=GO:0000166 | text = nucleotide binding}}{{GO|id=GO:0008026 | text = ATP-dependent helicase activity}}{{GO|id=GO:0004386 | text = helicase activity}}{{GO|id=GO:0003676 | text = nucleic acid binding}}{{GO|id=GO:0004003 | text = ATP-dependent DNA helicase activity}}{{GO|id=GO:0005524 | text = ATP binding}}{{GO|id=GO:0016787 | text = hydrolase activity}} | ||
|PROCESS={{GO|id=GO:0006281 | text = DNA repair}}{{GO|id=GO:0006310 | text = DNA recombination}} | |PROCESS={{GO|id=GO:0006281 | text = DNA repair}}{{GO|id=GO:0006310 | text = DNA recombination}} | ||
| - | |SARESOURCES=<span class='plainlinks'> | + | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001650 Ipr001650], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004365 Ipr004365], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011545 Ipr011545], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004609 Ipr004609], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014021 Ipr014021], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014001 Ipr014001]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00271 PF00271], [http://pfam.sanger.ac.uk/family?acc=PF01336 PF01336], [http://pfam.sanger.ac.uk/family?acc=PF00270 PF00270]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65298 d1gm5a1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65301 d1gm5a4], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65299 d1gm5a2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=65300 d1gm5a3]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q9WY48 Q9WY48]</span> |
| + | |uPDB=1GM5|CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_1gm5_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_1gm5_B</name> | ||
| + | <title>toggle chain B</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>C [x]</text> | ||
| + | <name>jmb_1gm5_C</name> | ||
| + | <title>toggle chain C</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>D [x]</text> | ||
| + | <name>jmb_1gm5_D</name> | ||
| + | <title>toggle chain D</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Current revision
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| 1gm5, resolution 3.24Å () | |||||||||
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| Ligands: | , | ||||||||
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| Resources: | FirstGlance, OCA, RCSB, PDBsum | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
