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Template:STRUCTURE 2d1r
From Proteopedia
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{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 2d1r, resolution 1.60Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2d1r]], [[Resolution|resolution]] 1.60Å (<scene name='initialview01'>default scene</scene>)}}} |
| - | + | |LIGAND= <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=OLU:2-(6-HYDROXY-1,3-BENZOTHIAZOL-2-YL)-1,3-THIAZOL-4(5H)-ONE'>OLU</scene> | |
| - | |LIGAND= <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP | + | |
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Photinus-luciferin_4-monooxygenase_(ATP-hydrolyzing) Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.12.7 1.13.12.7] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Photinus-luciferin_4-monooxygenase_(ATP-hydrolyzing) Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.12.7 1.13.12.7] </span> | ||
| - | |GENE= | ||
| - | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK08315 PRK08315], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0318 CaiC]</span> | ||
|RELATEDENTRY=[[2d1s|2d1s]], [[2d1t|2d1t]] | |RELATEDENTRY=[[2d1s|2d1s]], [[2d1t|2d1t]] | ||
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d1r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d1r OCA], [http://www.ebi.ac.uk/pdbsum/2d1r PDBsum], [http://www. | + | |NONSTDRES=<scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene> |
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d1r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d1r OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2d1r RCSB], [http://www.ebi.ac.uk/pdbsum/2d1r PDBsum], [http://www.topsan.org/Proteins/RSGI/2d1r TOPSAN]</span> | ||
| + | |FUNCTION={{GO|id=GO:0003824 | text = catalytic activity}}{{GO|id=GO:0047077 | text = Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0004497 | text = monooxygenase activity}}{{GO|id=GO:0000287 | text = magnesium ion binding}}{{GO|id=GO:0016491 | text = oxidoreductase activity}} | ||
| + | |PROCESS={{GO|id=GO:0008152 | text = metabolic process}}{{GO|id=GO:0008218 | text = bioluminescence}} | ||
| + | |COMPONENT={{GO|id=GO:0005777 | text = peroxisome}} | ||
| + | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000873 Ipr000873]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00501 PF00501]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P13129 P13129]</span> | ||
| + | |uPDB=2D1R|CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_2d1r_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Current revision
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| 2d1r, resolution 1.60Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | , | ||||||||
| Non-Standard Residues: | |||||||||
| Activity: | Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing), with EC number 1.13.12.7 | ||||||||
| Related: | 2d1s, 2d1t | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, RCSB, PDBsum, TOPSAN | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
